BLASTX nr result

ID: Salvia21_contig00012203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00012203
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL50982.1|AF453323_1 zinc finger protein LSD2 [Brassica oler...   114   9e-24
gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]               114   2e-23
ref|XP_002529881.1| Charged multivesicular body protein 2b-B, pu...   111   8e-23
gb|AFK48804.1| unknown [Lotus japonicus]                              110   2e-22
gb|AFK33823.1| unknown [Lotus japonicus]                              110   2e-22

>gb|AAL50982.1|AF453323_1 zinc finger protein LSD2 [Brassica oleracea]
          Length = 193

 Score =  114 bits (286), Expect = 9e-24
 Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   LMYPAGAPSVKCAICHFITNVNMGDTRVPIPVNRP-AVNSNSAPTQSTSTVTTAHSHNQT 179
           LMYP GAPSV+CA+C F+TNVNMG+ RVP P N+P    S+  P  STST +T  S  QT
Sbjct: 105 LMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNQPNGTASSPGPMPSTSTQSTPPSQTQT 164

Query: 180 VVVQNPMTVDESGKLVSNVVVGVTT 254
           VVV+NPM+V+ESGKLVSNVVVGVTT
Sbjct: 165 VVVENPMSVNESGKLVSNVVVGVTT 189


>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
          Length = 176

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/84 (66%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   LMYPAGAPSVKCAICHFITNVNMGDTRVPIPVNRPAVNSNSAPTQSTSTVTTAHSHNQTV 182
           LMYP GAPSVKCA+CH+ITN+NM + RVP+P NRP   +N     STST +   S  QTV
Sbjct: 91  LMYPYGAPSVKCAVCHYITNINMSNGRVPVPANRPQGTTNLGTLPSTST-SMPQSQGQTV 149

Query: 183 VVQNPMTVDESGKLVSNVVVGVTT 254
           VV+NPM+VD SGKLVSNVVVGVTT
Sbjct: 150 VVENPMSVDSSGKLVSNVVVGVTT 173


>ref|XP_002529881.1| Charged multivesicular body protein 2b-B, putative [Ricinus
           communis] gi|223530608|gb|EEF32484.1| Charged
           multivesicular body protein 2b-B, putative [Ricinus
           communis]
          Length = 405

 Score =  111 bits (278), Expect = 8e-23
 Identities = 55/83 (66%), Positives = 68/83 (81%)
 Frame = +3

Query: 3   LMYPAGAPSVKCAICHFITNVNMGDTRVPIPVNRPAVNSNSAPTQSTSTVTTAHSHNQTV 182
           L+YP GAPSVKCA+CH++TNV+MG+ RV +P NRP  N  +  T STST +T+ S  QTV
Sbjct: 323 LVYPYGAPSVKCALCHYVTNVSMGNVRVALPTNRP--NGTTGMTPSTST-STSQSQTQTV 379

Query: 183 VVQNPMTVDESGKLVSNVVVGVT 251
           VV+NPM+VDESGKLVSNVVVG+T
Sbjct: 380 VVENPMSVDESGKLVSNVVVGIT 402


>gb|AFK48804.1| unknown [Lotus japonicus]
          Length = 175

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = +3

Query: 3   LMYPAGAPSVKCAICHFITNVNMGDTRVPIPVNRPAVNSNSAPTQSTSTVTTAHSHNQTV 182
           LMYP GAPSVKCA+CH+ITNVNM + R+ +P++RP   +NS    STST +   S  QTV
Sbjct: 90  LMYPYGAPSVKCALCHYITNVNMSNGRLQVPMHRPNGTTNSGALPSTST-SMPQSQTQTV 148

Query: 183 VVQNPMTVDESGKLVSNVVVGVTT 254
           VV+NPM+VD SGKLVSNVVVGVTT
Sbjct: 149 VVENPMSVDSSGKLVSNVVVGVTT 172


>gb|AFK33823.1| unknown [Lotus japonicus]
          Length = 175

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = +3

Query: 3   LMYPAGAPSVKCAICHFITNVNMGDTRVPIPVNRPAVNSNSAPTQSTSTVTTAHSHNQTV 182
           LMYP GAPSVKCA+CH+ITNVNM + R+ +P++RP   +NS    STST +   S  QTV
Sbjct: 90  LMYPYGAPSVKCALCHYITNVNMSNGRLQVPMHRPNGTTNSGALPSTST-SMPQSQTQTV 148

Query: 183 VVQNPMTVDESGKLVSNVVVGVTT 254
           VV+NPM+VD SGKLVSNVVVGVTT
Sbjct: 149 VVENPMSVDSSGKLVSNVVVGVTT 172


Top