BLASTX nr result

ID: Salvia21_contig00011960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011960
         (1370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]   488   e-135
ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vini...   488   e-135
ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max]    458   e-126
ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max]    456   e-126
ref|XP_002509937.1| nucleotide binding protein, putative [Ricinu...   452   e-124

>emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]
          Length = 325

 Score =  488 bits (1256), Expect = e-135
 Identities = 233/321 (72%), Positives = 263/321 (81%)
 Frame = +1

Query: 142  MDKSILVLDKGTRCTAWNYSGERLVAGLVDGSLAVYDSTDPASSNFTCTSRFKAQNCGIV 321
            M+KS++ LD GT C++WNY+GERL  G VDG+LA++DS DPASS+FTCTSR +     IV
Sbjct: 1    MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSIV 60

Query: 322  KVVWALPEYGDAVACISEDGNLSLWEEVMEDTEDPHWKMCKCFDRNTSQVLDVQFGGGQT 501
            KVVW  PEYGDAV CI  DG LSLWEEV+ED +   WK+CK F  N+++VLDVQFG   T
Sbjct: 61   KVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPT 120

Query: 502  CLKLVAAYSDGQVKIYELLDTLELEKWQLQAEFQNVIDLVSKFGNVSSLSASVSWNPQRS 681
             LK+V+AYSDG VK+YELLD LEL+ WQLQAEFQN  D VS FG    LSASVSWNPQR 
Sbjct: 121  SLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRG 180

Query: 682  EVQQSSFVLGFSSNTPMLNSAKVWEFDLDHQRWLPVAELSLPEDKGDQVSSVAWAPNIGR 861
            E QQSSFVLGF S+TP LNSAKVWEFD +HQRWLPVAEL+L  DKGDQV +VAWAPNIGR
Sbjct: 181  ESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNIGR 240

Query: 862  PYELIAVATQKGISIWHLGSNPDHDGRLSVRRVALLAGHDNEVSEMEWDMSGMTLATTGS 1041
            PYE++AVAT KGI+IWHLG NPD DGRLSV RVALL+GHD EV +MEWDMSGMTLATTG 
Sbjct: 241  PYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATTGG 300

Query: 1042 DGMVRLWQSNLNGAWHEQAVL 1104
            DGMVRLWQSNLNG WHEQA L
Sbjct: 301  DGMVRLWQSNLNGVWHEQAAL 321


>ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vinifera]
            gi|297742315|emb|CBI34464.3| unnamed protein product
            [Vitis vinifera]
          Length = 325

 Score =  488 bits (1255), Expect = e-135
 Identities = 232/321 (72%), Positives = 263/321 (81%)
 Frame = +1

Query: 142  MDKSILVLDKGTRCTAWNYSGERLVAGLVDGSLAVYDSTDPASSNFTCTSRFKAQNCGIV 321
            M+KS++ LD GT C++WNY+GERL  G VDG+LA++DS DPASS+FTCTSR +     +V
Sbjct: 1    MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSVV 60

Query: 322  KVVWALPEYGDAVACISEDGNLSLWEEVMEDTEDPHWKMCKCFDRNTSQVLDVQFGGGQT 501
            KVVW  PEYGDAV CI  DG LSLWEEV+ED +   WK+CK F  N+++VLDVQFG   T
Sbjct: 61   KVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPT 120

Query: 502  CLKLVAAYSDGQVKIYELLDTLELEKWQLQAEFQNVIDLVSKFGNVSSLSASVSWNPQRS 681
             LK+V+AYSDG VK+YELLD LEL+ WQLQAEFQN  D VS FG    LSASVSWNPQR 
Sbjct: 121  SLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRG 180

Query: 682  EVQQSSFVLGFSSNTPMLNSAKVWEFDLDHQRWLPVAELSLPEDKGDQVSSVAWAPNIGR 861
            E QQSSFVLGF S+TP LNSAKVWEFD +HQRWLPVAEL+L  DKGDQV +VAWAPNIGR
Sbjct: 181  ESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNIGR 240

Query: 862  PYELIAVATQKGISIWHLGSNPDHDGRLSVRRVALLAGHDNEVSEMEWDMSGMTLATTGS 1041
            PYE++AVAT KGI+IWHLG NPD DGRLSV RVALL+GHD EV +MEWDMSGMTLATTG 
Sbjct: 241  PYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATTGG 300

Query: 1042 DGMVRLWQSNLNGAWHEQAVL 1104
            DGMVRLWQSNLNG WHEQA L
Sbjct: 301  DGMVRLWQSNLNGVWHEQAAL 321


>ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max]
          Length = 326

 Score =  458 bits (1179), Expect = e-126
 Identities = 218/320 (68%), Positives = 257/320 (80%), Gaps = 1/320 (0%)
 Frame = +1

Query: 142  MDKSILVLDKGTRCTAWNYSGERLVAGLVDGSLAVYDSTDP-ASSNFTCTSRFKAQNCGI 318
            M K +L LD GT CT+WNYSG RL AG  DG+L+++DS +P +SS+   T + +     I
Sbjct: 1    MAKELLTLDNGTTCTSWNYSGTRLAAGSADGTLSIFDSREPPSSSSLRSTFKSRVLEGNI 60

Query: 319  VKVVWALPEYGDAVACISEDGNLSLWEEVMEDTEDPHWKMCKCFDRNTSQVLDVQFGGGQ 498
            VK+VW  PEYGDAVACIS DG +SLWEEV ED++   WKMCK F  ++S+VLDVQFG   
Sbjct: 61   VKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDVQFGISL 120

Query: 499  TCLKLVAAYSDGQVKIYELLDTLELEKWQLQAEFQNVIDLVSKFGNVSSLSASVSWNPQR 678
              LK+VAAYSDG V+++EL D LEL  WQLQAEFQNVI+ VS FG  S LSAS+SWNPQ+
Sbjct: 121  ASLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQK 180

Query: 679  SEVQQSSFVLGFSSNTPMLNSAKVWEFDLDHQRWLPVAELSLPEDKGDQVSSVAWAPNIG 858
               Q+SSF++GF+SNTP LNS+KVWEFD  HQRWLPVAEL+LPEDKGDQV +VAWAPNIG
Sbjct: 181  GGSQESSFLVGFNSNTPELNSSKVWEFDQAHQRWLPVAELALPEDKGDQVYAVAWAPNIG 240

Query: 859  RPYELIAVATQKGISIWHLGSNPDHDGRLSVRRVALLAGHDNEVSEMEWDMSGMTLATTG 1038
            RPYE+IAVAT KG++IWHLG NPDHDGRL V RVALL+GH+  V +MEWDMSGMTLATTG
Sbjct: 241  RPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGMTLATTG 300

Query: 1039 SDGMVRLWQSNLNGAWHEQA 1098
             DGMVRLWQSNLNG WH+QA
Sbjct: 301  HDGMVRLWQSNLNGVWHQQA 320


>ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max]
          Length = 326

 Score =  456 bits (1172), Expect = e-126
 Identities = 217/320 (67%), Positives = 257/320 (80%), Gaps = 1/320 (0%)
 Frame = +1

Query: 142  MDKSILVLDKGTRCTAWNYSGERLVAGLVDGSLAVYDSTDP-ASSNFTCTSRFKAQNCGI 318
            M K +L LD GT CT+WNYSG RL AG VDG+L+++DS DP +SS+   T + +     I
Sbjct: 1    MAKELLTLDNGTTCTSWNYSGTRLAAGSVDGTLSIFDSRDPPSSSSLHSTFKSRVLEGNI 60

Query: 319  VKVVWALPEYGDAVACISEDGNLSLWEEVMEDTEDPHWKMCKCFDRNTSQVLDVQFGGGQ 498
            VK+VW  PEYGDAVACIS DG +SLWEEV ED++   WKMCK F  ++S+VLD QFG   
Sbjct: 61   VKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDAQFGISL 120

Query: 499  TCLKLVAAYSDGQVKIYELLDTLELEKWQLQAEFQNVIDLVSKFGNVSSLSASVSWNPQR 678
            T LK+VAAYSDG V+++EL D LEL  WQLQAEFQNVI+ VS FG  S LSAS+SWNPQ+
Sbjct: 121  TSLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQK 180

Query: 679  SEVQQSSFVLGFSSNTPMLNSAKVWEFDLDHQRWLPVAELSLPEDKGDQVSSVAWAPNIG 858
               Q+SSF++GF+SNT  LNS+KVWEFD  HQRWLPVAEL+LPE+KGDQ+ +VAWAPNIG
Sbjct: 181  GGSQESSFLVGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEEKGDQLYAVAWAPNIG 240

Query: 859  RPYELIAVATQKGISIWHLGSNPDHDGRLSVRRVALLAGHDNEVSEMEWDMSGMTLATTG 1038
            RPYE+IAVAT KG++IWHLG NPDHDGRL V RVALL+GH+  V +MEWDMSGMTLATTG
Sbjct: 241  RPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGMTLATTG 300

Query: 1039 SDGMVRLWQSNLNGAWHEQA 1098
             DGMVRLWQSNLNG WH+QA
Sbjct: 301  HDGMVRLWQSNLNGVWHQQA 320


>ref|XP_002509937.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223549836|gb|EEF51324.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 340

 Score =  452 bits (1162), Expect = e-124
 Identities = 213/319 (66%), Positives = 258/319 (80%)
 Frame = +1

Query: 142  MDKSILVLDKGTRCTAWNYSGERLVAGLVDGSLAVYDSTDPASSNFTCTSRFKAQNCGIV 321
            M+K+I  LD GT C++WNY G+RL  G +DG L+++D  DP SS+FT TS+ +  + GIV
Sbjct: 18   MEKAIATLDTGTTCSSWNYCGQRLATGSIDGYLSIFDPRDPGSSSFTRTSKIRVHDAGIV 77

Query: 322  KVVWALPEYGDAVACISEDGNLSLWEEVMEDTEDPHWKMCKCFDRNTSQVLDVQFGGGQT 501
            KVVW  PE+GDAVACI  DG+LSLWEEV+ED++   WK+ + F    ++VLDVQFG  +T
Sbjct: 78   KVVWVSPEHGDAVACICSDGSLSLWEEVVEDSQ-LQWKLSRSFQSKGNKVLDVQFGFSRT 136

Query: 502  CLKLVAAYSDGQVKIYELLDTLELEKWQLQAEFQNVIDLVSKFGNVSSLSASVSWNPQRS 681
             LK+V AYSDG +K+YELLD LEL+ WQLQAEFQNVID VS FG     SAS+SWNPQR+
Sbjct: 137  ILKMVVAYSDGNLKVYELLDPLELKNWQLQAEFQNVIDSVSTFGRAICFSASISWNPQRA 196

Query: 682  EVQQSSFVLGFSSNTPMLNSAKVWEFDLDHQRWLPVAELSLPEDKGDQVSSVAWAPNIGR 861
            E Q  SFVLGF+S+TP LNS+KVWEFD  HQRWLPVAEL+LP DK DQV +VAWAPNIGR
Sbjct: 197  ENQDLSFVLGFNSDTPQLNSSKVWEFDQAHQRWLPVAELALPADKSDQVFAVAWAPNIGR 256

Query: 862  PYELIAVATQKGISIWHLGSNPDHDGRLSVRRVALLAGHDNEVSEMEWDMSGMTLATTGS 1041
            PYE++AV+T KGI+IWHLG NPD DGRLSV +VALL+G + EV +MEWD+SGMTLATTG+
Sbjct: 257  PYEVLAVSTHKGIAIWHLGLNPDVDGRLSVEKVALLSGFEGEVWQMEWDISGMTLATTGT 316

Query: 1042 DGMVRLWQSNLNGAWHEQA 1098
            DG+VRLWQSNLNG WHEQA
Sbjct: 317  DGVVRLWQSNLNGVWHEQA 335


Top