BLASTX nr result

ID: Salvia21_contig00011775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011775
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002534168.1| pentatricopeptide repeat-containing protein,...    98   8e-19
ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...    91   1e-16
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]    91   1e-16

>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  100 bits (249), Expect = 1e-19
 Identities = 54/110 (49%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
 Frame = +3

Query: 30  SMRFRHFHT-TILRSSRINATPPRRNTSHFFXXXXXXXXXXXXXXXFTDSDIVKYNVAIT 206
           S RFR  H+ + LRS +   T  R+ ++                   TD+DIVK+N+AIT
Sbjct: 6   SNRFRQLHSRSCLRSLQTTTTANRKPSTR--------NQPKTTSSLATDADIVKWNIAIT 57

Query: 207 NYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDEMP 356
           N++RNGQCD+ALRLFNSMPR+S++S+N MISG LSN +F LA+ LF++MP
Sbjct: 58  NHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = +3

Query: 177 DIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDEMP 356
           D+V +NV I+  +R     AA  LF+ MP +  VS+N M+SGY  NG  K A+ +FDEMP
Sbjct: 110 DLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP 169



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = +3

Query: 171 DSDIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDE 350
           D +++ +N  +  Y++  +   A  +F+ MP +  VS+NTMISGY  NGE   AQ LF+E
Sbjct: 201 DWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE 260

Query: 351 MP 356
            P
Sbjct: 261 SP 262


>ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525755|gb|EEF28217.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 513

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/63 (68%), Positives = 56/63 (88%)
 Frame = +3

Query: 168 TDSDIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFD 347
           TDSDIV +N+AIT ++RNGQC +AL++FN+MPR+STV+YN MISGYLSNG F LA+ +FD
Sbjct: 53  TDSDIVNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFD 112

Query: 348 EMP 356
           +MP
Sbjct: 113 KMP 115



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/62 (43%), Positives = 38/62 (61%)
 Frame = +3

Query: 171 DSDIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDE 350
           + D+  +NV ++ Y+RN     A  LF  MPR+  VS+N M+SGY  NG    A+ +FDE
Sbjct: 116 ERDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIFDE 175

Query: 351 MP 356
           MP
Sbjct: 176 MP 177



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = +3

Query: 177 DIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDEMP 356
           D+  +   ++ Y++NG  D A  +F+ MP K++VS+N MI+GY+      +A+ LF+ MP
Sbjct: 273 DVFTWTAMVSGYVQNGMVDEARSIFDKMPEKNSVSWNAMIAGYVQCKRMDMAKELFEAMP 332


>ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = +3

Query: 165 FTDSDIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLF 344
           F D DIV +N AI++++RNG CD+ALR+FNSMPR+S+VSYN MISGYL N +F LA+ LF
Sbjct: 41  FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLF 100

Query: 345 DEMP 356
           D+MP
Sbjct: 101 DKMP 104



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/62 (41%), Positives = 41/62 (66%)
 Frame = +3

Query: 171 DSDIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDE 350
           + D+  +NV +T Y+RN +   A +LF+ MP+K  VS+N M+SGY  NG    A+ +F++
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNK 164

Query: 351 MP 356
           MP
Sbjct: 165 MP 166



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/57 (36%), Positives = 38/57 (66%)
 Frame = +3

Query: 177 DIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFD 347
           D+V +N  ++ Y +NG  D A  +FN MP ++++S+N +++ Y+ NG  K A+ LF+
Sbjct: 138 DVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFE 194


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525106|gb|AET05560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 980

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
 Frame = +3

Query: 27  CSMRFRHFHTTILRSSRI-NATPPRRNTSHFFXXXXXXXXXXXXXXXFTDSDIVKYNVAI 203
           C++ F H  T+  RS  + N   PR                        D DI+K+N AI
Sbjct: 19  CTINFGHTSTSTRRSESVTNNNKPR----------------------VKDPDILKWNKAI 56

Query: 204 TNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDEMP 356
           + ++RNG CD+AL +FN+MPR+S+VSYN MISGYL N +F LA++LFD+MP
Sbjct: 57  STHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = +3

Query: 171 DSDIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDE 350
           + D+  +NV +T Y+RN +   A RLF+ MP K  VS+N+++SGY  NG    A+ +FD 
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167

Query: 351 MP 356
           MP
Sbjct: 168 MP 169



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 37/60 (61%)
 Frame = +3

Query: 177 DIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDEMP 356
           D+  +   ++ Y++NG  D A   F+ MP K+ VSYN MI+GY+   +  +A+ LF+ MP
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMP 324


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
 Frame = +3

Query: 27  CSMRFRHFHTTILRSSRI-NATPPRRNTSHFFXXXXXXXXXXXXXXXFTDSDIVKYNVAI 203
           C++ F H  T+  RS  + N   PR                        D DI+K+N AI
Sbjct: 19  CTINFGHTSTSTRRSESVTNNNKPR----------------------VKDPDILKWNKAI 56

Query: 204 TNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDEMP 356
           + ++RNG CD+AL +FN+MPR+S+VSYN MISGYL N +F LA++LFD+MP
Sbjct: 57  STHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = +3

Query: 171 DSDIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDE 350
           + D+  +NV +T Y+RN +   A RLF+ MP K  VS+N+++SGY  NG    A+ +FD 
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167

Query: 351 MP 356
           MP
Sbjct: 168 MP 169



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 37/60 (61%)
 Frame = +3

Query: 177 DIVKYNVAITNYLRNGQCDAALRLFNSMPRKSTVSYNTMISGYLSNGEFKLAQHLFDEMP 356
           D+  +   ++ Y++NG  D A   F+ MP K+ VSYN MI+GY+   +  +A+ LF+ MP
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMP 324


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