BLASTX nr result

ID: Salvia21_contig00011604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011604
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    67   2e-09
ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    67   2e-09
ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...    66   3e-09
ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...    64   1e-08

>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/91 (43%), Positives = 50/91 (54%)
 Frame = -1

Query: 274 LPPQSRHLFAGLRAFIDQKNISNGKCIHAHLLKTGILRACAPFSISLLILYAKCSLFSDA 95
           LPPQ R     L     QK++  GK IHA LL+TG   +    + SL+ LYAKC     A
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSF-SSVYLTNSLVNLYAKCGSIVKA 64

Query: 94  RRLFDQMPLKHDAVPWNILINGYSQSGLARY 2
           + +F+ +  K D V WN LINGYSQ G   Y
Sbjct: 65  KLVFESITNK-DVVSWNCLINGYSQKGTVGY 94


>ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/91 (43%), Positives = 50/91 (54%)
 Frame = -1

Query: 274 LPPQSRHLFAGLRAFIDQKNISNGKCIHAHLLKTGILRACAPFSISLLILYAKCSLFSDA 95
           LPPQ R     L     QK++  GK IHA LL+TG   +    + SL+ LYAKC     A
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSF-SSVYLTNSLVNLYAKCGSIVKA 64

Query: 94  RRLFDQMPLKHDAVPWNILINGYSQSGLARY 2
           + +F+ +  K D V WN LINGYSQ G   Y
Sbjct: 65  KLVFESITNK-DVVSWNCLINGYSQKGTVGY 94


>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/87 (39%), Positives = 49/87 (56%)
 Frame = -1

Query: 274 LPPQSRHLFAGLRAFIDQKNISNGKCIHAHLLKTGILRACAPFSISLLILYAKCSLFSDA 95
           L PQ+   F  L  F  QK++  G+ +HA ++K     +C   + SL+  YAKC     A
Sbjct: 3   LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62

Query: 94  RRLFDQMPLKHDAVPWNILINGYSQSG 14
           + +FD++  K D + WN LINGYSQ G
Sbjct: 63  KLVFDRIHNK-DVISWNCLINGYSQQG 88


>ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 599

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/93 (36%), Positives = 51/93 (54%)
 Frame = -1

Query: 292 MNQVAALPPQSRHLFAGLRAFIDQKNISNGKCIHAHLLKTGILRACAPFSISLLILYAKC 113
           M +V  + P    +   + A I+ KN+  G+ IH +++K  +LR       +L+ LY KC
Sbjct: 197 MVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKC 256

Query: 112 SLFSDARRLFDQMPLKHDAVPWNILINGYSQSG 14
                AR+LFD++P K+  V WN LI GY Q G
Sbjct: 257 GYLDGARKLFDEIPEKNTVV-WNSLICGYCQIG 288


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/89 (37%), Positives = 54/89 (60%)
 Frame = -1

Query: 268 PQSRHLFAGLRAFIDQKNISNGKCIHAHLLKTGILRACAPFSISLLILYAKCSLFSDARR 89
           P S   F+ LRA +   N+  GKCIHA+++ +G L +    + +L+ +Y+KC   S AR+
Sbjct: 702 PSSSQCFSLLRAAVSTSNLHLGKCIHANIITSG-LTSDRFLANNLITMYSKCGSVSSARQ 760

Query: 88  LFDQMPLKHDAVPWNILINGYSQSGLARY 2
           LFD+ P   D V WN +++ Y++S  + Y
Sbjct: 761 LFDRTP-DRDLVTWNAVLSAYARSDESEY 788


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