BLASTX nr result

ID: Salvia21_contig00011408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011408
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein ...   176   7e-42
gb|AAF00626.1|AC009540_3 putative GAR1 protein [Arabidopsis thal...   176   9e-42
ref|NP_566217.1| H/ACA ribonucleoprotein complex subunit 1 [Arab...   176   9e-42
gb|AAM61071.1| putative GAR1 protein [Arabidopsis thaliana]           175   2e-41
ref|XP_002281927.1| PREDICTED: putative H/ACA ribonucleoprotein ...   175   2e-41

>ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Cucumis sativus]
           gi|449484903|ref|XP_004157013.1| PREDICTED: putative
           H/ACA ribonucleoprotein complex subunit 1-like protein
           1-like [Cucumis sativus]
          Length = 194

 Score =  176 bits (447), Expect = 7e-42
 Identities = 83/93 (89%), Positives = 93/93 (100%)
 Frame = +1

Query: 385 SEVVEISTFVHACEGDAVTKLSHEKIPYFNAPIYLENKTQIGKVDEIFGPINESFFSIKM 564
           SEVVE+STF+HACEGDAVTKL++EKIP+FNAPIYL+NKTQIGKVDEIFGPINES+FSIKM
Sbjct: 47  SEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYFSIKM 106

Query: 565 MEGIVATSYSAGDKFFIDPAKLLPLARFLPQPK 663
           MEGIVATSY++GDKF+IDPAKLLPLARFLPQPK
Sbjct: 107 MEGIVATSYASGDKFYIDPAKLLPLARFLPQPK 139


>gb|AAF00626.1|AC009540_3 putative GAR1 protein [Arabidopsis thaliana]
           gi|6223652|gb|AAF05866.1|AC011698_17 unknown protein
           [Arabidopsis thaliana]
          Length = 219

 Score =  176 bits (446), Expect = 9e-42
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = +1

Query: 385 SEVVEISTFVHACEGDAVTKLSHEKIPYFNAPIYLENKTQIGKVDEIFGPINESFFSIKM 564
           SEVVE++TFVHACEGDAVTKLS EKIP+FNAPIYLENKTQIGKVDEIFGPINES FSIKM
Sbjct: 56  SEVVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLFSIKM 115

Query: 565 MEGIVATSYSAGDKFFIDPAKLLPLARFLPQPK 663
           MEGIVATSYS GDKFFIDP KLLPLARFLPQPK
Sbjct: 116 MEGIVATSYSPGDKFFIDPYKLLPLARFLPQPK 148


>ref|NP_566217.1| H/ACA ribonucleoprotein complex subunit 1 [Arabidopsis thaliana]
           gi|68565918|sp|Q8VZT0.1|NLAL1_ARATH RecName:
           Full=Putative H/ACA ribonucleoprotein complex subunit
           1-like protein 1 gi|17380836|gb|AAL36230.1| putative
           GAR1 protein [Arabidopsis thaliana]
           gi|20259633|gb|AAM14173.1| putative GAR1 protein
           [Arabidopsis thaliana] gi|332640491|gb|AEE74012.1| H/ACA
           ribonucleoprotein complex subunit 1 [Arabidopsis
           thaliana]
          Length = 202

 Score =  176 bits (446), Expect = 9e-42
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = +1

Query: 385 SEVVEISTFVHACEGDAVTKLSHEKIPYFNAPIYLENKTQIGKVDEIFGPINESFFSIKM 564
           SEVVE++TFVHACEGDAVTKLS EKIP+FNAPIYLENKTQIGKVDEIFGPINES FSIKM
Sbjct: 56  SEVVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLFSIKM 115

Query: 565 MEGIVATSYSAGDKFFIDPAKLLPLARFLPQPK 663
           MEGIVATSYS GDKFFIDP KLLPLARFLPQPK
Sbjct: 116 MEGIVATSYSPGDKFFIDPYKLLPLARFLPQPK 148


>gb|AAM61071.1| putative GAR1 protein [Arabidopsis thaliana]
          Length = 202

 Score =  175 bits (443), Expect = 2e-41
 Identities = 85/93 (91%), Positives = 89/93 (95%)
 Frame = +1

Query: 385 SEVVEISTFVHACEGDAVTKLSHEKIPYFNAPIYLENKTQIGKVDEIFGPINESFFSIKM 564
           SEVV+++TFVHACEGDAVTKLS EKIP+FNAPIYLENKTQIGKVDEIFGPINES FSIKM
Sbjct: 56  SEVVDVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLFSIKM 115

Query: 565 MEGIVATSYSAGDKFFIDPAKLLPLARFLPQPK 663
           MEGIVATSYS GDKFFIDP KLLPLARFLPQPK
Sbjct: 116 MEGIVATSYSPGDKFFIDPYKLLPLARFLPQPK 148


>ref|XP_002281927.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1 isoform 1 [Vitis vinifera]
           gi|359482126|ref|XP_003632716.1| PREDICTED: putative
           H/ACA ribonucleoprotein complex subunit 1-like protein 1
           isoform 2 [Vitis vinifera] gi|297739759|emb|CBI29941.3|
           unnamed protein product [Vitis vinifera]
          Length = 188

 Score =  175 bits (443), Expect = 2e-41
 Identities = 83/93 (89%), Positives = 91/93 (97%)
 Frame = +1

Query: 385 SEVVEISTFVHACEGDAVTKLSHEKIPYFNAPIYLENKTQIGKVDEIFGPINESFFSIKM 564
           SEVVE+STF+HACEGDAVT+L++ KIPYFNAPIYL+NKTQIGKVDEIFGPINES+FSIKM
Sbjct: 41  SEVVEVSTFLHACEGDAVTRLTNAKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSIKM 100

Query: 565 MEGIVATSYSAGDKFFIDPAKLLPLARFLPQPK 663
           MEGIVATSYS+GDKFFIDPAKLLPL RFLPQPK
Sbjct: 101 MEGIVATSYSSGDKFFIDPAKLLPLERFLPQPK 133


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