BLASTX nr result

ID: Salvia21_contig00011379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011379
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556911.1| PREDICTED: WD repeat-containing protein 55-l...   134   5e-29
ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-l...   132   1e-28
ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [...   130   7e-28
ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [...   128   2e-27
ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g...   127   3e-27

>ref|XP_003556911.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max]
          Length = 313

 Score =  134 bits (336), Expect = 5e-29
 Identities = 68/109 (62%), Positives = 77/109 (70%)
 Frame = +3

Query: 6   IISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLDELLQGSENT 185
           II+LVGILPNR+IQPIAEHSEYPVE LAFSHD+KFLGSISHDQ LKLWDLD +LQGS NT
Sbjct: 205 IINLVGILPNRVIQPIAEHSEYPVECLAFSHDRKFLGSISHDQMLKLWDLDNILQGSGNT 264

Query: 186 LPNRXXXXXXXXXXXXXXXXIPKPSKGTKRKNVSKGSNLNNSSNFFAEM 332
             N                   K SKG KRKN + G+ L  S+NFFA++
Sbjct: 265 QSNEAGAVDSDDDEMDLDDDPSKNSKGNKRKNANNGNALGGSNNFFADL 313


>ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max]
          Length = 352

 Score =  132 bits (333), Expect = 1e-28
 Identities = 69/111 (62%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   GIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLDELLQGSEN 182
           GII+LVGILPNR+IQPIAEHSEYPVE LAFSHDKKFLGSI+HDQ LKLWDLD +LQGS N
Sbjct: 242 GIINLVGILPNRVIQPIAEHSEYPVECLAFSHDKKFLGSIAHDQMLKLWDLDNILQGSGN 301

Query: 183 TLPNRXXXXXXXXXXXXXXXXIP-KPSKGTKRKNVSKGSNLNNSSNFFAEM 332
           T  N                  P K +KG KRKN + G+ L  S+NFFA++
Sbjct: 302 TQRNEAGGAVDSDDDEMDLDDDPSKINKGNKRKNANNGNALGGSNNFFADL 352


>ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|298205166|emb|CBI17225.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  130 bits (326), Expect = 7e-28
 Identities = 69/110 (62%), Positives = 81/110 (73%)
 Frame = +3

Query: 3   GIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLDELLQGSEN 182
           G+ISLVGILPNRIIQPIAEHSEYPVERLAFS D+K+LGSISHDQ LKLWDLD+LLQGS +
Sbjct: 243 GLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQGSGS 302

Query: 183 TLPNRXXXXXXXXXXXXXXXXIPKPSKGTKRKNVSKGSNLNNSSNFFAEM 332
           TL +R                +   +K TKRK  S G  LN+SS+FFA++
Sbjct: 303 TLRSR------EAMADSDSDEMDVDAKETKRKTASNGQALNSSSSFFADL 346


>ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|297743547|emb|CBI36414.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  128 bits (322), Expect = 2e-27
 Identities = 68/110 (61%), Positives = 81/110 (73%)
 Frame = +3

Query: 3   GIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLDELLQGSEN 182
           G+ISLVGILPNRIIQPIAEHSEYPVERLAFS D+K+LGSISHDQ LKLWDLD+LLQGS +
Sbjct: 243 GLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQGSGS 302

Query: 183 TLPNRXXXXXXXXXXXXXXXXIPKPSKGTKRKNVSKGSNLNNSSNFFAEM 332
           TL ++                +   +K TKRK  S G  LN+SS+FFA++
Sbjct: 303 TLRSQ------EAMADSDSDEMDVDAKETKRKTASNGQALNSSSSFFADL 346


>ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula]
           gi|355510141|gb|AES91283.1| WD-40 repeat protein
           [Medicago truncatula]
          Length = 420

 Score =  127 bits (320), Expect = 3e-27
 Identities = 67/115 (58%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
 Frame = +3

Query: 3   GIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLDELLQGSEN 182
           G+I+LVGILPNRII+PIAEHSEYPVERLAFSHD+KFLGSI HDQ LKLWDLD +LQGS +
Sbjct: 306 GMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQGSRS 365

Query: 183 TLPNR-----XXXXXXXXXXXXXXXXIPKPSKGTKRKNVSKGSNLNNSSNFFAEM 332
           T  N                        K SKG KRKN S G  + +S+NFFA++
Sbjct: 366 TQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNNFFADL 420


Top