BLASTX nr result

ID: Salvia21_contig00011218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011218
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]    67   6e-09
ref|XP_002513029.1| protein with unknown function [Ricinus commu...    65   1e-08
ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, c...    60   5e-07
dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatu...    60   7e-07

>ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 13/122 (10%)
 Frame = -2

Query: 542 EQLLKVVYISSPMKVKTSASRFRSLVQELTGKNSDVSQYMD-DGAKDFYHEIDCEHQSIA 366
           ++ +KVVYISSPMKVKTSAS+FR+LVQELTGK+SD  ++MD +GA+D    ++  HQ+  
Sbjct: 20  KKAIKVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMDINGARD---SLEIPHQTAE 76

Query: 365 ------------XXXXXXXXXXXXXSLQGHMDLDAFTSQMRDQFSGIFSSDSFYDPSQLD 222
                                    S  G +D + F S M   F G+     F++  QLD
Sbjct: 77  YDHHPSVFPLTNSCNDQSPSTTSSESFLGSLDGEFFPS-MEGSFMGMLQPSLFHESFQLD 135

Query: 221 VL 216
           VL
Sbjct: 136 VL 137


>emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]
          Length = 124

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 39/97 (40%), Positives = 57/97 (58%)
 Frame = -2

Query: 533 LKVVYISSPMKVKTSASRFRSLVQELTGKNSDVSQYMDDGAKDFYHEIDCEHQSIAXXXX 354
           +KVVYISSPMKVKTSAS+FR+LVQELTG++SDV +YM++  ++   ++    Q +     
Sbjct: 12  VKVVYISSPMKVKTSASKFRALVQELTGRDSDVERYMENKEREESRKMVMGDQGLG--AV 69

Query: 353 XXXXXXXXXSLQGHMDLDAFTSQMRDQFSGIFSSDSF 243
                     L G  D+D+F  +  +   G+    SF
Sbjct: 70  DHSSSSSESLLFGLFDMDSFMPREEEGSVGMMFPSSF 106


>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 33/53 (62%), Positives = 47/53 (88%), Gaps = 2/53 (3%)
 Frame = -2

Query: 545 SEQLLKVVYISSPMKVKTSASRFRSLVQELTGKNSDVSQYMD--DGAKDFYHE 393
           S++ +KVVYISSPMKV+TSAS+FR+LVQELTGK+SD +++MD  +GA+++  E
Sbjct: 18  SKKGIKVVYISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGAENYSTE 70


>ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Cucumis sativus] gi|449487122|ref|XP_004157503.1|
           PREDICTED: sigma factor binding protein 1,
           chloroplastic-like [Cucumis sativus]
          Length = 140

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 28/37 (75%), Positives = 35/37 (94%)
 Frame = -2

Query: 530 KVVYISSPMKVKTSASRFRSLVQELTGKNSDVSQYMD 420
           KVVYISSPMKVKTSAS+FRSLVQ+LTG++SD  ++M+
Sbjct: 21  KVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFME 57


>dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatus subsp. vulgaris]
          Length = 146

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = -2

Query: 530 KVVYISSPMKVKTSASRFRSLVQELTGKNSDVSQYMD 420
           KVVYISSPMKVKTSAS+FRSLVQ LTG++SD  ++M+
Sbjct: 21  KVVYISSPMKVKTSASKFRSLVQRLTGQDSDAERFME 57


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