BLASTX nr result

ID: Salvia21_contig00011213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011213
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307496.1| predicted protein [Populus trichocarpa] gi|3...   176   2e-42
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380...   175   5e-42
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...   175   5e-42
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me...   175   5e-42
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis...   174   6e-42

>ref|XP_002307496.1| predicted protein [Populus trichocarpa]
           gi|359493111|ref|XP_002266320.2| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like isoform 1
           [Vitis vinifera] gi|222856945|gb|EEE94492.1| predicted
           protein [Populus trichocarpa]
          Length = 97

 Score =  176 bits (446), Expect = 2e-42
 Identities = 89/91 (97%), Positives = 90/91 (98%)
 Frame = -2

Query: 482 SAVKEPLDLIRLSLDERIYVKLRHDRELRGRLHAYDQHLNMILGDVEEIVTTVEIDDETY 303
           SAVKEPLDLIRLSLDERIYVKLR DRELRG+LHAYDQHLNMILGDVEEIVTTVEIDDETY
Sbjct: 7   SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 66

Query: 302 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 210
           EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 67  EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97


>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
           [Lotus japonicus]
          Length = 97

 Score =  175 bits (443), Expect = 5e-42
 Identities = 88/91 (96%), Positives = 90/91 (98%)
 Frame = -2

Query: 482 SAVKEPLDLIRLSLDERIYVKLRHDRELRGRLHAYDQHLNMILGDVEEIVTTVEIDDETY 303
           SAVKEPLDLIRLSLDERIYVKLR DRELRG+LHAYDQHLNMILGDVEEIVTTVEIDDETY
Sbjct: 7   SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 66

Query: 302 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 210
           EEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 67  EEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
           gi|255626487|gb|ACU13588.1| unknown [Glycine max]
          Length = 97

 Score =  175 bits (443), Expect = 5e-42
 Identities = 88/91 (96%), Positives = 90/91 (98%)
 Frame = -2

Query: 482 SAVKEPLDLIRLSLDERIYVKLRHDRELRGRLHAYDQHLNMILGDVEEIVTTVEIDDETY 303
           SAVKEPLDLIRLSLDERIYVKLR DRELRG+LHAYDQHLNMILGDVEEIVTTVEIDDETY
Sbjct: 7   SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 66

Query: 302 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 210
           EEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 67  EEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
           gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
           protein LSm3 [Medicago truncatula]
          Length = 98

 Score =  175 bits (443), Expect = 5e-42
 Identities = 88/91 (96%), Positives = 90/91 (98%)
 Frame = -2

Query: 482 SAVKEPLDLIRLSLDERIYVKLRHDRELRGRLHAYDQHLNMILGDVEEIVTTVEIDDETY 303
           SAVKEPLDLIRLSLDERIYVKLR DRELRG+LHAYDQHLNMILGDVEEIVTTVEIDDETY
Sbjct: 8   SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 67

Query: 302 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 210
           EEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 68  EEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 98


>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
           gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
           [Ricinus communis]
          Length = 97

 Score =  174 bits (442), Expect = 6e-42
 Identities = 87/91 (95%), Positives = 90/91 (98%)
 Frame = -2

Query: 482 SAVKEPLDLIRLSLDERIYVKLRHDRELRGRLHAYDQHLNMILGDVEEIVTTVEIDDETY 303
           SAVKEPLDLIRLSLDERIYVKLR DRELRG+LHAYDQHLNMILGDVEE+VTTVEIDDETY
Sbjct: 7   SAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETY 66

Query: 302 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 210
           EEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 67  EEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


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