BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011140
         (1625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...   451   e-124
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...   390   e-106
ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containi...   382   e-103
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...   359   1e-96
ref|XP_003612846.1| Pentatricopeptide repeat-containing protein ...   333   1e-88

>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
            mitochondrial-like [Vitis vinifera]
            gi|297742067|emb|CBI33854.3| unnamed protein product
            [Vitis vinifera]
          Length = 767

 Score =  451 bits (1160), Expect = e-124
 Identities = 218/421 (51%), Positives = 305/421 (72%)
 Frame = +2

Query: 17   NCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGLSLL 196
            N YCYN +IHG    GELD+A++V  EM+  GI  +VY+YSILI GFC+  +VEKGL L+
Sbjct: 324  NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383

Query: 197  EEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQ 376
            EEM+ SN++PS+V+YSS+  GL +    +I+LD+F+ +  +G +YD  AY+ILI GF  Q
Sbjct: 384  EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQ 443

Query: 377  GEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRPYLF 556
            G++DSA++L+EEM  NNLAPD  ++ESL+ GFC++G    A +F ++M+E G LP     
Sbjct: 444  GDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATC 503

Query: 557  NHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVMLK 736
            N I+  +C +GRVEEAL L+++M   GI PN ++Y+A+INRLCKE KS +ALE+ P+MLK
Sbjct: 504  NVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLK 563

Query: 737  SNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGRVEE 916
             N  P+ V+YS LI GFAKQ+N ++A MLYA MLK G++PD+V +TIL N L    R+ E
Sbjct: 564  RNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCE 623

Query: 917  AYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTCLID 1096
            AYNLF+ M   G+ PD ISYT++IAGFC   DM+KAW+LF EM+ +G  P+VVTYT L+D
Sbjct: 624  AYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVD 683

Query: 1097 GFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMKNRGIIT 1276
            G+CK+N + +A+MLI EM +K + PD+ TY VL+   +R G +D+A  +  EMK  G++ 
Sbjct: 684  GYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLP 743

Query: 1277 D 1279
            D
Sbjct: 744  D 744



 Score =  228 bits (581), Expect = 4e-57
 Identities = 123/404 (30%), Positives = 217/404 (53%), Gaps = 6/404 (1%)
 Frame = +2

Query: 86   VFSEMEDSGIVANVYSYSILIEGFCRHR------NVEKGLSLLEEMERSNIKPSIVTYSS 247
            +F EM+ +G   NV++Y+I++  +C+        +  +   +LEEMER+   P++VTYS+
Sbjct: 236  LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295

Query: 248  VLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQGEMDSANRLVEEMTNNN 427
             + GL R+G++E ALD  + + ++    +   YN +I G  ++GE+D A +++EEM +  
Sbjct: 296  YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 428  LAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRPYLFNHIVHGYCSKGRVEEAL 607
            ++PD ++Y  LI GFC+ G  +K    ++ M  +   P    ++ + HG C K   + +L
Sbjct: 356  ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415

Query: 608  QLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVMLKSNQFPNDVIYSILIHGF 787
             +   +   G   +  +YS +I   C +     A +++  M+++N  P+   +  L+HGF
Sbjct: 416  DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475

Query: 788  AKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGRVEEAYNLFRVMISKGLYPDV 967
             K      A   +  ML+ GI P + T  ++ +A   EGRVEEA NL   M ++G++P++
Sbjct: 476  CKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNL 535

Query: 968  ISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTCLIDGFCKINHMGMANMLIVE 1147
             +Y  +I   C+ +  ++A  LF  M+ + + PSVV Y+ LIDGF K ++   A ML   
Sbjct: 536  FTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYAR 595

Query: 1148 MNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMKNRGIITD 1279
            M +  V PD+  Y +L+        +  A  LF +M   G+  D
Sbjct: 596  MLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPD 639



 Score =  180 bits (456), Expect = 1e-42
 Identities = 109/390 (27%), Positives = 184/390 (47%), Gaps = 41/390 (10%)
 Frame = +2

Query: 227  SIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQ---------- 376
            S++ +  ++K  +    +E A+D+F + + +G E  TR+ N L+   +E           
Sbjct: 178  SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 377  ---------------------------GEMD----SANRLVEEMTNNNLAPDYFSYESLI 463
                                       GE D     A  ++EEM  N  +P   +Y + I
Sbjct: 238  EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 464  LGFCRIGSCDKAFDFLDVMVEAGFLPRPYLFNHIVHGYCSKGRVEEALQLIDKMTYLGIS 643
             G CR+G  + A DF+  ++ A  L   Y +N I+HG C KG ++EAL+++++M   GIS
Sbjct: 298  YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357

Query: 644  PNTYSYSAIINRLCKEHKSRKALEVIPVMLKSNQFPNDVIYSILIHGFAKQANLREAFML 823
            P+ Y+YS +I+  CK+    K L +I  M  SN  P+ V YS L HG  K+     +  +
Sbjct: 358  PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417

Query: 824  YANMLKAGISPDVVTFTILSNALSTEGRVEEAYNLFRVMISKGLYPDVISYTNIIAGFCE 1003
            + ++  AG   D   ++IL      +G ++ A+ L   M+   L PD  ++ +++ GFC+
Sbjct: 418  FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 1004 SKDMKKAWSLFQEMVNKGISPSVVTYTCLIDGFCKINHMGMANMLIVEMNQKNVCPDLST 1183
                  A   F  M+  GI PS+ T   +ID  C+   +  A  L+ EM  + + P+L T
Sbjct: 478  MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537

Query: 1184 YRVLLRECQRLGFVDRAQLLFTEMKNRGII 1273
            Y  ++    +    +RA  LF  M  R ++
Sbjct: 538  YNAVINRLCKERKSERALELFPLMLKRNVL 567



 Score =  155 bits (391), Expect = 4e-35
 Identities = 94/324 (29%), Positives = 158/324 (48%)
 Frame = +2

Query: 5    GQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKG 184
            G  Y+   Y+I+I G+   G+LD A ++  EM  + +  +  ++  L+ GFC+       
Sbjct: 425  GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484

Query: 185  LSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITG 364
            L     M    I PSI T + ++    R G +E AL+L  +++T G   +   YN +I  
Sbjct: 485  LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINR 544

Query: 365  FSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPR 544
              ++ + + A  L   M   N+ P    Y +LI GF +  +  KA      M++ G  P 
Sbjct: 545  LCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPD 604

Query: 545  PYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIP 724
               +  +++  C + R+ EA  L  KMT  G++P+  SY+++I   C+    RKA  +  
Sbjct: 605  MVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFN 664

Query: 725  VMLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEG 904
             ML+    P  V Y+ L+ G+ K   +  A ML   M + GI+PDVVT+ +L  A    G
Sbjct: 665  EMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRG 724

Query: 905  RVEEAYNLFRVMISKGLYPDVISY 976
             +++A  +   M   G+ PD ++Y
Sbjct: 725  NLDKALEMLNEMKENGVLPDHMTY 748



 Score = 70.9 bits (172), Expect = 9e-10
 Identities = 35/118 (29%), Positives = 67/118 (56%)
 Frame = +2

Query: 2   NGQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEK 181
           NG   +   Y  VI G+  IG++ +A  +F+EM   G +  V +Y+ L++G+C+   ++ 
Sbjct: 634 NGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDI 693

Query: 182 GLSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNIL 355
              L++EM+R  I P +VTY+ ++    R G ++ AL++  +++ +G   D   Y +L
Sbjct: 694 ADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751


>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score =  390 bits (1001), Expect = e-106
 Identities = 200/421 (47%), Positives = 272/421 (64%)
 Frame = +2

Query: 8    QPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGL 187
            QP N YCYN VIH +   GEL +A ++  +M   GI    YSYSILI+G C+   VEK L
Sbjct: 319  QPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKAL 378

Query: 188  SLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGF 367
             L+EEM +SN+KPS+VTYSS+  GL + G  EI+L +F  +   G ++D  +YN LI GF
Sbjct: 379  DLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGF 438

Query: 368  SEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRP 547
              Q +M SA +LV EM  N   P+ F++  LI GFC+    DKA +   +M++ G     
Sbjct: 439  VLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNI 498

Query: 548  YLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPV 727
            +  N +   +  +G   EAL+LI+++  LGI PN+Y+Y+ +I  LCKE K+ KA EV+PV
Sbjct: 499  FTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPV 558

Query: 728  MLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGR 907
            MLK+N FP  + Y+ LI G+AKQ+N  +A +LYA MLK GI P +VT+T+L N  S   +
Sbjct: 559  MLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSK 618

Query: 908  VEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTC 1087
            ++EAY LF+ MI KGL PD I +T IIAGFC+  DMK AW+L++EM   G SP+VVTYTC
Sbjct: 619  MQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTC 678

Query: 1088 LIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMKNRG 1267
            LIDG+ KI  M  A+ L  +M + NV PD  TY  L+   Q LG+ DR + +F EMK  G
Sbjct: 679  LIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENG 738

Query: 1268 I 1270
            +
Sbjct: 739  V 739



 Score =  223 bits (567), Expect = 1e-55
 Identities = 120/433 (27%), Positives = 220/433 (50%), Gaps = 5/433 (1%)
 Frame = +2

Query: 5    GQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRH---RNV 175
            G   N    N +++ +    + +    +F E++DSG   NV++Y+I++  +C+    +N+
Sbjct: 208  GLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNI 267

Query: 176  E--KGLSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYN 349
            +  K   +LEEME +   P++VTY + + GL R G +E AL L + +R      ++  YN
Sbjct: 268  DIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYN 327

Query: 350  ILITGFSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEA 529
             +I  F   GE+  A  L+E+M ++ ++P  +SY  LI G C+ G  +KA D ++ MV++
Sbjct: 328  AVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQS 387

Query: 530  GFLPRPYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKA 709
               P    ++ +  G C  G  E +L +   +   G   +  SY+ +IN    +     A
Sbjct: 388  NVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSA 447

Query: 710  LEVIPVMLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNA 889
             +++  M  +   PN   ++ LIHGF K+  L +A  ++  MLK G+  ++ T  I+++ 
Sbjct: 448  CKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADE 507

Query: 890  LSTEGRVEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPS 1069
             + EG   EA  L   +   G+ P+  +Y  +I   C+ +  +KAW +   M+   + P 
Sbjct: 508  FNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPC 567

Query: 1070 VVTYTCLIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFT 1249
             + Y  LIDG+ K ++   A +L  +M +  + P + TY +L+        +  A  LF 
Sbjct: 568  AIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFK 627

Query: 1250 EMKNRGIITD*VL 1288
            EM  +G++ D ++
Sbjct: 628  EMIKKGLVPDEII 640



 Score =  162 bits (409), Expect = 3e-37
 Identities = 118/435 (27%), Positives = 206/435 (47%), Gaps = 11/435 (2%)
 Frame = +2

Query: 2    NGQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEK 181
            +G  ++ Y + I+IH   S G L   +Q+F        + ++ SY         ++ V  
Sbjct: 115  HGFSHSIYAFKIIIHVLASAG-LQMEVQIF--------LRDIISY---------YKEVNL 156

Query: 182  GLS-----LLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAY 346
             +S     LL+  + +++  SI+  + ++K  +    +  A D+F + R  G E +  + 
Sbjct: 157  DVSELFSTLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSC 216

Query: 347  NILITGFSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDF------ 508
            N L+  F+E  + +    L EE+ ++  +P+ F+Y  ++  +C+ GS  K  D       
Sbjct: 217  NFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCK-GSFGKNIDIVKATEV 275

Query: 509  LDVMVEAGFLPRPYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCK 688
            L+ M   G  P    +   +HG C  G VE AL+LI  +       N+Y Y+A+I+  C+
Sbjct: 276  LEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCR 335

Query: 689  EHKSRKALEVIPVMLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVT 868
              +  +A E++  M      P    YSILI G  K+  + +A  L   M+++ + P +VT
Sbjct: 336  NGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVT 395

Query: 869  FTILSNALSTEGRVEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMV 1048
            ++ L + L   G  E + ++F  + ++G   DVISY  +I GF   +DM  A  L  EM 
Sbjct: 396  YSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMR 455

Query: 1049 NKGISPSVVTYTCLIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVD 1228
              G  P+  T+  LI GFCK   +  A  +   M +  V  ++ T  ++  E  R G   
Sbjct: 456  MNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFW 515

Query: 1229 RAQLLFTEMKNRGII 1273
             A  L  E+++ GI+
Sbjct: 516  EALKLINEVQDLGIV 530



 Score =  135 bits (339), Expect = 4e-29
 Identities = 80/327 (24%), Positives = 162/327 (49%)
 Frame = +2

Query: 5    GQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKG 184
            G  ++   YN +I+G+V   ++  A ++  EM  +G V N ++++ LI GFC+ + ++K 
Sbjct: 423  GYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKA 482

Query: 185  LSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITG 364
            L +   M +  ++ +I T + +    +R G    AL L  +++  G   ++  YNI+I  
Sbjct: 483  LEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKW 542

Query: 365  FSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPR 544
              ++ + + A  ++  M  NN+ P    Y +LI G+ +  +  KA      M++ G  P 
Sbjct: 543  LCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPS 602

Query: 545  PYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIP 724
               +  +++ + ++ +++EA  L  +M   G+ P+   ++ II   CK    + A  +  
Sbjct: 603  IVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYE 662

Query: 725  VMLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEG 904
             M +  + PN V Y+ LI G+ K   + +A  L+  M +  ++PD +T+T L     + G
Sbjct: 663  EMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLG 722

Query: 905  RVEEAYNLFRVMISKGLYPDVISYTNI 985
              +    +F  M   G++P+  +Y  +
Sbjct: 723  YSDRVREMFNEMKENGVFPNYTAYATL 749


>ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Glycine max]
          Length = 827

 Score =  382 bits (981), Expect = e-103
 Identities = 193/424 (45%), Positives = 279/424 (65%)
 Frame = +2

Query: 8    QPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGL 187
            QP N + +N VI+G+   GE+ +A+QV  EM+ SGI+ +VYSYSILI  FC   +V K L
Sbjct: 387  QPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCL 446

Query: 188  SLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGF 367
             L+EEME S IKPSIV+Y+S++ GL +   ++ A+D+F  I  S C+YD+  Y  LI GF
Sbjct: 447  DLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGF 506

Query: 368  SEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRP 547
              QG+MDSA +L+EEM  N L P  FS  SLI G+ ++G  D+A +  + M+  G  P  
Sbjct: 507  CMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDT 566

Query: 548  YLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPV 727
               N+I+ G C  G  +EAL L++     G + N +SY+AII +LCKE    +ALE++P 
Sbjct: 567  IACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPR 626

Query: 728  MLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGR 907
            MLK N  P+ V YS LI GFAKQ+N + A  L+  M+K GI+ ++ T+TIL +  S   +
Sbjct: 627  MLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHK 686

Query: 908  VEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTC 1087
            + EAY +F+ M  +GL  D ISYT +I GFC +++MKKAW+LF+EM  +G SP+V+TYTC
Sbjct: 687  MHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTC 746

Query: 1088 LIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMKNRG 1267
            +IDGFCK N + +A  +  +MN+ +V PD+ TY VL+    + G+ D+A  L+  MK++G
Sbjct: 747  IIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKG 806

Query: 1268 IITD 1279
            ++ D
Sbjct: 807  VLPD 810



 Score =  159 bits (402), Expect = 2e-36
 Identities = 90/354 (25%), Positives = 175/354 (49%)
 Frame = +2

Query: 29   YNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGLSLLEEME 208
            Y  +IHG      L  A+ +F  +  S    +   Y  LI+GFC   +++  + LLEEM 
Sbjct: 464  YTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMI 523

Query: 209  RSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQGEMD 388
             + + P+  +  S+++G  ++G  + AL++F  +   G   DT A N ++ G    G   
Sbjct: 524  CNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFK 583

Query: 389  SANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRPYLFNHIV 568
             A  L+E+   +    +  SY ++I   C+ G  ++A + L  M++   LP    ++ ++
Sbjct: 584  EALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLI 643

Query: 569  HGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVMLKSNQF 748
             G+  +   + A+ L  +M  +GI+ N  +Y+ +++     HK  +A  +   M +    
Sbjct: 644  SGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLC 703

Query: 749  PNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGRVEEAYNL 928
             + + Y+ LI GF     +++A+ L+  M + G SP+V+T+T + +      R++ A  +
Sbjct: 704  LDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWV 763

Query: 929  FRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTCL 1090
            F  M    + PDV++YT +I  + +     +A  L+  M +KG+ P  +T+  L
Sbjct: 764  FDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  147 bits (370), Expect = 1e-32
 Identities = 104/429 (24%), Positives = 193/429 (44%), Gaps = 7/429 (1%)
 Frame = +2

Query: 2    NGQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFC---RHRN 172
            +G  ++  C+ I++H +   G     ++V++ + D             I GFC   ++  
Sbjct: 186  HGFSHSISCFRIIVHAFALAG---MRLEVWALLRD-------------IVGFCNEAKYDT 229

Query: 173  VEKGLSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNI 352
             E   + L+  +  +++ S V +  ++   +    +E ALD+F   +  G E D R  N 
Sbjct: 230  FELFSAFLDSPQ--HVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNF 287

Query: 353  LITGFSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCD----KAFDFLDVM 520
            L+    E   ++   R+ EE+ +   +P+ ++Y  ++  +C    CD    +A   L  +
Sbjct: 288  LLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKI 347

Query: 521  VEAGFLPRPYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKS 700
              +G  P    ++  +HG C  G VE AL LI  + Y     N++S++ +I   CK  + 
Sbjct: 348  YRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEV 407

Query: 701  RKALEVIPVMLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTIL 880
             +AL+V+  M  S   P+   YSILI+ F  + ++ +   L   M  + I P +V++T L
Sbjct: 408  FEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSL 467

Query: 881  SNALSTEGRVEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGI 1060
             + L  +  ++ A ++F  + +     D   Y  +I GFC   DM  A  L +EM+   +
Sbjct: 468  IHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNEL 527

Query: 1061 SPSVVTYTCLIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQL 1240
             P+  +   LI G+ K+     A  +   M +  + PD      +L    R G+   A  
Sbjct: 528  VPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALT 587

Query: 1241 LFTEMKNRG 1267
            L  + +  G
Sbjct: 588  LLEDFQEHG 596



 Score =  139 bits (351), Expect = 2e-30
 Identities = 82/321 (25%), Positives = 154/321 (47%)
 Frame = +2

Query: 14   YNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGLSL 193
            Y+   Y  +I G+   G++D A+++  EM  + +V   +S   LI G+ +    ++ L +
Sbjct: 494  YDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEV 553

Query: 194  LEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSE 373
               M R  I P  +  + +L G  R G+ + AL L +  +  G   +  +YN +I    +
Sbjct: 554  FNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCK 613

Query: 374  QGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRPYL 553
            +G  + A  L+  M   N+ P   +Y +LI GF +  +  +A +    MV+ G       
Sbjct: 614  EGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIAT 673

Query: 554  FNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVML 733
            +  ++  +    ++ EA  +  +M   G+  +  SY+ +I   C   + +KA  +   M 
Sbjct: 674  YTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMS 733

Query: 734  KSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGRVE 913
            +    PN + Y+ +I GF K   +  A  ++  M +  + PDVVT+T+L +     G  +
Sbjct: 734  REGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFD 793

Query: 914  EAYNLFRVMISKGLYPDVISY 976
            +A+ L+ VM  KG+ PD I++
Sbjct: 794  QAHKLYDVMKDKGVLPDDITH 814



 Score =  100 bits (249), Expect = 1e-18
 Identities = 60/223 (26%), Positives = 107/223 (47%)
 Frame = +2

Query: 2    NGQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEK 181
            +G   N + YN +I+     G  ++A+++   M    ++ +V +YS LI GF +  N ++
Sbjct: 595  HGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKR 654

Query: 182  GLSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILIT 361
             ++L   M +  I  +I TY+ ++   S    M  A  +FK+++  G   D  +Y  LI 
Sbjct: 655  AVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIV 714

Query: 362  GFSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLP 541
            GF    EM  A  L EEM+    +P+  +Y  +I GFC+    D A    D M     +P
Sbjct: 715  GFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIP 774

Query: 542  RPYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAI 670
                +  ++  Y   G  ++A +L D M   G+ P+  +++ +
Sbjct: 775  DVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
 Frame = +2

Query: 683  CKEHKSRKALEVIPVMLKSNQFP--NDVIYSILIHGFAKQANLREAFMLYANMLKAGISP 856
            C E K     E+    L S Q    + V++ +LI  FA  + L  A  +++N    G+ P
Sbjct: 222  CNEAKY-DTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEP 280

Query: 857  DVVTFTILSNALSTEGRVEEAYNLFRVMISKGLYPDVISYTNIIAGFCE----SKDMKKA 1024
            D+ T   L   L    RVE    +F  +  +G  P++ +YT ++  +C        M++A
Sbjct: 281  DIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQA 340

Query: 1025 WSLFQEMVNKGISPSVVTYTCLIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRE 1204
              +  ++   G  P+VVTY+  I G CK+ ++  A MLI  ++  N   +  ++  ++  
Sbjct: 341  AVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYG 400

Query: 1205 CQRLGFVDRAQLLFTEMKNRGIITD 1279
              + G V  A  +  EMK+ GI+ D
Sbjct: 401  FCKRGEVFEALQVLEEMKSSGILPD 425


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
            predicted protein [Populus trichocarpa]
          Length = 697

 Score =  359 bits (922), Expect = 1e-96
 Identities = 183/427 (42%), Positives = 264/427 (61%), Gaps = 1/427 (0%)
 Frame = +2

Query: 2    NGQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEK 181
            + QP N YCYN +I G+   G  D+A+++  EM+D GI  ++YSYSIL+  FC   ++E 
Sbjct: 254  SNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIES 313

Query: 182  GLSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILIT 361
            G++L++EME  N KP +V  +SVL GL   G +   L+ F ++   G ++D  +Y+ LI 
Sbjct: 314  GMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIH 373

Query: 362  GFSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLP 541
            GF +   + SAN LV EM  N L PDY  Y SLI  +CR G   +A      M++ G  P
Sbjct: 374  GFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQP 433

Query: 542  RPYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVI 721
                 NHIV  YCS+G+ EEAL  I++M    I PN+Y+YS IIN LCK     KA EV+
Sbjct: 434  DIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVL 493

Query: 722  PVMLKSNQFPNDVIYSILIHGFAKQ-ANLREAFMLYANMLKAGISPDVVTFTILSNALST 898
            PVM K N FP+ + Y+ ++ G+AKQ  N  +A+ LY  M K G  PD VT T+L +  S 
Sbjct: 494  PVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSK 553

Query: 899  EGRVEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVT 1078
             G++ +A NLF+ M  +GL  D  ++T II G+C   ++K+AWS++++M    ++P+V T
Sbjct: 554  RGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKT 613

Query: 1079 YTCLIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMK 1258
            YTCL+DGFCK+  + MA MLI +M + +V PD+ TY  L+   QR+  +DRA  +F EMK
Sbjct: 614  YTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMK 673

Query: 1259 NRGIITD 1279
             +G + D
Sbjct: 674  KKGTLPD 680



 Score =  207 bits (527), Expect = 6e-51
 Identities = 124/431 (28%), Positives = 215/431 (49%), Gaps = 6/431 (1%)
 Frame = +2

Query: 5    GQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRN---- 172
            G   N    N ++       +L+    +F ++++SG   NVY+Y+I+I  +C+ R+    
Sbjct: 145  GVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNI 204

Query: 173  -VEKGLSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYN 349
             +E+   +LEEME     P++VTY   + GL R+G +E A +  + +R+S    +   YN
Sbjct: 205  DMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYN 264

Query: 350  ILITGFSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEA 529
             LI GF ++G  D A +L+EEM +  ++PD +SY  L+  FC  G  +   + +  M   
Sbjct: 265  ALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHC 324

Query: 530  GFLPRPYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKA 709
               P       ++ G  +KG V + L    +++  G   +  SYS +I+   K H  + A
Sbjct: 325  NKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSA 384

Query: 710  LEVIPVMLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNA 889
              ++  M K+   P+ +IY  LI  + ++  L+EA   +  ML+ G+ PD++T   + + 
Sbjct: 385  NNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQ 444

Query: 890  LSTEGRVEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPS 1069
              + G+ EEA      M  + + P+  +Y+ II   C+ + ++KAW +   M    I PS
Sbjct: 445  YCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPS 504

Query: 1070 VVTYTCLIDGFCK-INHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLF 1246
            V+ YT ++DG+ K   +   A  L  +M +    PD  T  VL+    + G + +A  LF
Sbjct: 505  VIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLF 564

Query: 1247 TEMKNRGIITD 1279
             EM   G+  D
Sbjct: 565  KEMAEEGLSRD 575



 Score =  144 bits (362), Expect = 9e-32
 Identities = 90/359 (25%), Positives = 165/359 (45%), Gaps = 36/359 (10%)
 Frame = +2

Query: 26   CYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGLSLLEEM 205
            C   V+ G  + G ++  +  F E+   G   ++ SYS LI GF +  NV+   +L+ EM
Sbjct: 332  CCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEM 391

Query: 206  ERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQGEM 385
             ++ + P  + Y S+++   R G ++ AL  F  +   G + D    N ++  +  +G+ 
Sbjct: 392  RKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQF 451

Query: 386  DSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRPYLFNHI 565
            + A   + +M + N+ P+ ++Y  +I   C+  + +KA++ L VM +    P    +  I
Sbjct: 452  EEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTI 511

Query: 566  VHGYCS------------------------------------KGRVEEALQLIDKMTYLG 637
            + GY                                      +G++ +AL L  +M   G
Sbjct: 512  MDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEG 571

Query: 638  ISPNTYSYSAIINRLCKEHKSRKALEVIPVMLKSNQFPNDVIYSILIHGFAKQANLREAF 817
            +S + ++++AII+  C+    ++A  +   M ++N  PN   Y+ L+ GF K   L  A 
Sbjct: 572  LSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMAT 631

Query: 818  MLYANMLKAGISPDVVTFTILSNALSTEGRVEEAYNLFRVMISKGLYPDVISYTNIIAG 994
            ML  +M +  ++PDV T+T L         ++ AY +F  M  KG  PD I+Y  +  G
Sbjct: 632  MLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLG 690



 Score =  126 bits (317), Expect = 1e-26
 Identities = 90/357 (25%), Positives = 161/357 (45%)
 Frame = +2

Query: 227  SIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQGEMDSANRLV 406
            S    S ++K  +    +  A D+F + +  G E +  + N L+   +E  ++++   L 
Sbjct: 114  SATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLF 173

Query: 407  EEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRPYLFNHIVHGYCSK 586
            +++ N+  +P+ ++Y  +I  +C+    ++    +D+                       
Sbjct: 174  DDLKNSGPSPNVYTYTIMINFYCK----ERHGQNIDM----------------------- 206

Query: 587  GRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVMLKSNQFPNDVIY 766
               E+A  ++++M   G +P   +Y   I+ LC+      A   I  +  SNQ  N   Y
Sbjct: 207  ---EQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCY 263

Query: 767  SILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGRVEEAYNLFRVMIS 946
            + LI GF ++    EA  L   M   GISPD+ +++IL NA  TEG +E   NL + M  
Sbjct: 264  NALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEH 323

Query: 947  KGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTCLIDGFCKINHMGM 1126
                P ++  T+++ G      +    + F E+  KG    +++Y+ LI GF K +++  
Sbjct: 324  CNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKS 383

Query: 1127 ANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMKNRGIITD*VLEEH 1297
            AN L+ EM +  + PD   Y  L+RE  R G +  A   F  M   G+  D +   H
Sbjct: 384  ANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNH 440


>ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355514181|gb|AES95804.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  333 bits (853), Expect = 1e-88
 Identities = 177/423 (41%), Positives = 263/423 (62%)
 Frame = +2

Query: 8    QPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGL 187
            QP N +C+N VI+G    G LD+A +VF EM++SGI+ +VYSYSILI+GFCR   V++  
Sbjct: 276  QPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQAS 335

Query: 188  SLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGF 367
             + +EM  S I P+I +YS ++ G  + G ++ AL++F++++ SG   D  +Y+ILI GF
Sbjct: 336  EVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGF 395

Query: 368  SEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRP 547
              +G+MDSA +  EEMT+NN +P  F+Y SLI G+ +      A     +M + G  P  
Sbjct: 396  CRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDT 455

Query: 548  YLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPV 727
               NHI+  YC K    +AL L +K    G+  N YSY+  I+R+C+     KAL+++PV
Sbjct: 456  IACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPV 515

Query: 728  MLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGR 907
            MLK N  P+ V YS LI  FAK+ N  +A ML+  M K GI+ +V T+TIL N   ++ +
Sbjct: 516  MLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCK 575

Query: 908  VEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTC 1087
            ++ AY LF+ M    +YPD I+YT+++AGFC + +M +A +LF EM  +G SP+VVTYTC
Sbjct: 576  MDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTC 635

Query: 1088 LIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMKNRG 1267
             I+ + K+N    A+ L  +M ++ V PD   Y +L+      G ++RA+ LF EMK  G
Sbjct: 636  FINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEG 695

Query: 1268 IIT 1276
              T
Sbjct: 696  RCT 698



 Score =  231 bits (590), Expect = 3e-58
 Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 1/384 (0%)
 Frame = +2

Query: 17   NCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGLSLL 196
            N Y Y+I+I G+   G +D+A++VF EM++SGI+ +VYSYSILI+GFCR  +++  +   
Sbjct: 349  NIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFW 408

Query: 197  EEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQ 376
            EEM  +N  PS   Y S++KG  +      AL  F+ ++  G   DT A N +++ +  +
Sbjct: 409  EEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRK 468

Query: 377  GEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRPYLF 556
             + + A  L E+   N +  + +SY   I   CR    +KA   L VM++   LP    +
Sbjct: 469  PDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNY 528

Query: 557  NHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVMLK 736
            + ++  +  +   E+A+ L  KMT +GI+ N  +Y+ +IN    + K   A  +   M +
Sbjct: 529  STLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKE 588

Query: 737  SNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGRVEE 916
            S  +P+ + Y+ L+ GF     +  A  L+  M + G SP+VVT+T   N      +  +
Sbjct: 589  SRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQ 648

Query: 917  AYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKG-ISPSVVTYTCLI 1093
            A+ L+  M  +G+YPD I YT +IA FC + +M +A +LF EM  +G  +P+VV YTCLI
Sbjct: 649  AHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLI 708

Query: 1094 DGFCKINHMGMANMLIVEMNQKNV 1165
            + + K+N    A  L  EM  K +
Sbjct: 709  NSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  199 bits (507), Expect = 1e-48
 Identities = 131/461 (28%), Positives = 220/461 (47%), Gaps = 39/461 (8%)
 Frame = +2

Query: 2    NGQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCR----HR 169
            +G   N    N ++   V    +D    +F  +   G   N+++Y+I++  FCR      
Sbjct: 165  DGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSV 224

Query: 170  NVEKGLSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYN 349
            ++ +   +L ++  S   P++VTY + +KGL ++G   +A  L + +       +   +N
Sbjct: 225  DIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFN 284

Query: 350  ILITGFSEQGEMDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEA 529
             +I G  + G +D A+ + +EM N+ + PD +SY  LI GFCR G  D+A +    M  +
Sbjct: 285  AVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS 344

Query: 530  GFLPRPYLFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKA 709
            G LP  Y ++ ++ G+C +GRV++AL++ ++M   GI P+ YSYS +I+  C++     A
Sbjct: 345  GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSA 404

Query: 710  LEVIPVMLKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFT-ILS- 883
            ++    M  +N  P+   Y  LI G+ K      A   +  M K G+ PD +    ILS 
Sbjct: 405  IKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSI 464

Query: 884  --------NALSTEGRVEE-------------------------AYNLFRVMISKGLYPD 964
                     AL+   + +E                         A  L  VM+ + + PD
Sbjct: 465  YCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPD 524

Query: 965  VISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTCLIDGFCKINHMGMANMLIV 1144
            V++Y+ +I+ F +  + +KA  LF +M   GI+ +V TYT LI+ F     M +A  L  
Sbjct: 525  VVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFK 584

Query: 1145 EMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMKNRG 1267
             M +  V PD   Y  L+      G + RA+ LF EM   G
Sbjct: 585  GMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG 625



 Score =  148 bits (374), Expect = 4e-33
 Identities = 112/421 (26%), Positives = 192/421 (45%), Gaps = 7/421 (1%)
 Frame = +2

Query: 29   YNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKG--LSLLEE 202
            ++I+IH Y   G    + +VF  + D             I  F +  N + G  +SLL +
Sbjct: 88   FSIIIHTYALAG---MSWEVFILIRD-------------IVTFYKEENRDAGELVSLLLD 131

Query: 203  MERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQGE 382
            +E+SN     V +  ++K  +    +E A  +F + +  G E +  + N L+    E   
Sbjct: 132  VEKSN-----VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNR 186

Query: 383  MDSANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCD----KAFDFLDVMVEAGFLPRPY 550
            +D    L E +      P+  +Y  ++  FCR   C     +A + L  +  +G  P   
Sbjct: 187  VDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVV 246

Query: 551  LFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVM 730
             +   + G C  G    A +LI  +       N + ++A+I  LC+     +A EV   M
Sbjct: 247  TYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEM 306

Query: 731  LKSNQFPNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGRV 910
              S   P+   YSILI GF ++  + +A  ++  M  +GI P++ +++IL +    EGRV
Sbjct: 307  KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRV 366

Query: 911  EEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVTYTCL 1090
            ++A  +F  M + G+ PDV SY+ +I GFC   DM  A   ++EM +   SPS   Y  L
Sbjct: 367  DKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSL 426

Query: 1091 IDGFCKINHMGMANMLIVEMNQKNVCPD-LSTYRVLLRECQRLGFVDRAQLLFTEMKNRG 1267
            I G+ K      A      M +  + PD ++   +L   C++  F ++A  L  + +  G
Sbjct: 427  IKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDF-NKALALSEKFQENG 485

Query: 1268 I 1270
            +
Sbjct: 486  V 486



 Score =  128 bits (321), Expect = 5e-27
 Identities = 84/298 (28%), Positives = 141/298 (47%), Gaps = 1/298 (0%)
 Frame = +2

Query: 32   NIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKGLSLLEEMER 211
            N ++  Y    + ++A+ +  + +++G+  N YSY+  I   CR    EK L LL  M +
Sbjct: 459  NHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLK 518

Query: 212  SNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITGFSEQGEMDS 391
             N+ P +V YS+++   ++    E A+ LF K+   G  ++ + Y ILI  F    +MD 
Sbjct: 519  RNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDV 578

Query: 392  ANRLVEEMTNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAGFLPRPYLFNHIVH 571
            A RL + M  + + PD  +Y SL+ GFC  G   +A    D M   G  P    +   ++
Sbjct: 579  AYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638

Query: 572  GYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVMLKSNQ-F 748
             Y    +  +A +L +KM   G+ P+   Y+ +I   C   +  +A  +   M +  +  
Sbjct: 639  EYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCT 698

Query: 749  PNDVIYSILIHGFAKQANLREAFMLYANMLKAGISPDVVTFTILSNALSTEGRVEEAY 922
            PN V+Y+ LI+ + K     +A  LY  M   G          LS   S+EG V E++
Sbjct: 699  PNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG----------LSRLCSSEGSVSESW 746



 Score =  103 bits (257), Expect = 1e-19
 Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
 Frame = +2

Query: 551  LFNHIVHGYCSKGRVEEALQLIDKMTYLGISPNTYSYSAIINRLCKEHKSRKALEVIPVM 730
            +F+ ++  + S   +E A  +  +    GI  N  S + ++  L ++++      +  V+
Sbjct: 138  VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVL 197

Query: 731  LKSNQFPNDVIYSILIHGFAK----QANLREAFMLYANMLKAGISPDVVTFTILSNALST 898
            +K    PN   Y+I+++ F +      ++R A  +   +  +G +P+VVT+      L  
Sbjct: 198  IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCK 257

Query: 899  EGRVEEAYNLFRVMISKGLYPDVISYTNIIAGFCESKDMKKAWSLFQEMVNKGISPSVVT 1078
             G    A+ L + +  K    +   +  +I G C+   + +A  +F+EM N GI P V +
Sbjct: 258  VGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYS 317

Query: 1079 YTCLIDGFCKINHMGMANMLIVEMNQKNVCPDLSTYRVLLRECQRLGFVDRAQLLFTEMK 1258
            Y+ LIDGFC+   +  A+ +  EM    + P++ +Y +L+    + G VD+A  +F EMK
Sbjct: 318  YSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK 377

Query: 1259 NRGIITD 1279
            N GI+ D
Sbjct: 378  NSGILPD 384



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
 Frame = +2

Query: 5    GQPYNCYCYNIVIHGYVSIGELDQAMQVFSEMEDSGIVANVYSYSILIEGFCRHRNVEKG 184
            G  +N   Y I+I+ ++S  ++D A ++F  M++S +  +  +Y+ L+ GFC    + + 
Sbjct: 555  GITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRA 614

Query: 185  LSLLEEMERSNIKPSIVTYSSVLKGLSRIGFMEIALDLFKKIRTSGCEYDTRAYNILITG 364
             +L +EM R    P++VTY+  +    ++     A  L++K++  G   D   Y +LI  
Sbjct: 615  RALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAA 674

Query: 365  FSEQGEMDSANRLVEEM-TNNNLAPDYFSYESLILGFCRIGSCDKAFDFLDVMVEAG 532
            F   GEM+ A  L +EM       P+   Y  LI  + ++   D+A    + M   G
Sbjct: 675  FCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731