BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00011118
         (1699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   652   0.0  
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   644   0.0  
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              634   e-179
ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   632   e-179
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   618   e-174

>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  652 bits (1681), Expect = 0.0
 Identities = 336/498 (67%), Positives = 385/498 (77%), Gaps = 6/498 (1%)
 Frame = +3

Query: 6    MRKKLLSREALSVFKHKQQSKIRPPPPVYS-PVIRVSNNIVHLGLPKEGPKPRQLLSLPP 182
            M K +  R  +S  + +  S+I PPPP Y+ PVIRVSNN+ HLG PK+GPKPRQLLSLPP
Sbjct: 1    MWKNIYCRRVVS--QGRSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPP 58

Query: 183  FPGHPLPGRNSTSAAYVTAISWLRYYFNEIPPLVIQKHFNEGL--VQSTRGLSRCYEGQA 356
            FPG PLPGRNS  A++VTAISW++YYF+EI    IQ HFN+GL  ++   G      G  
Sbjct: 59   FPGLPLPGRNSM-ASHVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIEYGGQ 117

Query: 357  MSTKKIRPNDIMEVGARVHVPVSVAESKVSKRFDVIPSATLNPNADEIEYIRRLVMYKDS 536
            MS +KI+ NDIME GARVHV VSVAE+++SKRFD IPS TL PNADEI+Y++RLV YKDS
Sbjct: 118  MSLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDS 177

Query: 537  AILVLNKPPNLPVKGPVTIHNSMDALAAASLSYNYDEGPKLVCRLDRESSGLLLMGRTKE 716
            AI+VLNKPP LPVKG + +HNSMDALAAA+LSY+YDEGPKLV RLDRESSGLLLMGRTKE
Sbjct: 178  AIIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKE 237

Query: 717  SISYLQWLFSDTKKTMSFSKXXXXXXXXXXXXXXXXXXXXXXXXKEWNDACDTTYQRYWA 896
            SI +LQWLFSD  K+ S                           K WNDAC  TYQRYWA
Sbjct: 238  SIDHLQWLFSDVNKSNS-------------------------RCKAWNDACKATYQRYWA 272

Query: 897  LVIGSPKQKEGLICAPLTKVLLNDGKTARVMLAHNSGLEASQEAITEYRVLGPIINGCSW 1076
            LVIGSPK+KEGLI APL+KVLLNDGKT RV+LA +SGLEASQEA+TEYRVLGP INGCSW
Sbjct: 273  LVIGSPKEKEGLIRAPLSKVLLNDGKTERVVLAQHSGLEASQEALTEYRVLGPRINGCSW 332

Query: 1077 IELRPRTNCKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQLPRVDYEATTGEPYKMRRP 1256
            IELRP T+ KHQLRVHCAEALGTPIVGDYKYGW VH RWKQ+PRVD E  +G+PYK+RRP
Sbjct: 333  IELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRP 392

Query: 1257 EGLDVHKGSVLSKVPRLHLHCREMVLPNIAKFIELHNWQSRKSGVDP---EERDILRFIA 1427
             GLDV KGSVLSKVP LHLHCRE VLPNIAKF+ + N   +   + P    + D+LRF+A
Sbjct: 393  AGLDVQKGSVLSKVPLLHLHCREFVLPNIAKFLAVLN--EKSENIHPALDAKPDLLRFVA 450

Query: 1428 PMPSHMKISWNLMSSYLV 1481
             MP+HMKISWNLMSSYLV
Sbjct: 451  SMPTHMKISWNLMSSYLV 468


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  644 bits (1660), Expect = 0.0
 Identities = 323/488 (66%), Positives = 383/488 (78%), Gaps = 12/488 (2%)
 Frame = +3

Query: 54   KQQSKIRPPPPVYS-PVIRVSNNIVHLGLPKEGPKPRQLLSLPPFPGHPLPGRNSTSAA- 227
            +  S+I PP P  + PVIRVSNN+  LG PKEGPKPRQLLSLPPFP HPLPG++  + + 
Sbjct: 17   RHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSLVNVSG 76

Query: 228  ---YVTAISWLRYYFNEIPPLVIQKHFNEGLVQSTRG----LSRCYEGQAMSTKKIRPND 386
               +VTAISW++YYF+EIP  V+Q HFN+GLV   R      S   EGQ    +KI+PN+
Sbjct: 77   LPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKPNE 136

Query: 387  IMEVGARVHVPVSVAESKVSKRFDVIPSATLNPNADEIEYIRRLVMYKDSAILVLNKPPN 566
            +ME G R++VPVSVAE+++SKRFD IPS TL+PNADEIEY++RLV YKD AILVLNKPP 
Sbjct: 137  VMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPAILVLNKPPK 196

Query: 567  LPVKGPVTIHNSMDALAAASLSYNYDEGPKLVCRLDRESSGLLLMGRTKESISYLQWLFS 746
            +P+KG + +HNSMDALAAA+L+++Y+EGPKLV RLDRESSGLLLMGRTKES+++L WLFS
Sbjct: 197  VPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFS 256

Query: 747  DTKKTMSFSKXXXXXXXXXXXXXXXXXXXXXXXXKEWNDACDTTYQRYWALVIGSPKQKE 926
            D  K  S SK                          W+DAC+ T QRYWALVIGSPKQKE
Sbjct: 257  DINKAKSLSKA-------------------------WDDACEATCQRYWALVIGSPKQKE 291

Query: 927  GLICAPLTKVLLNDGKTARVMLAHNSGLEASQEAITEYRVLGPIINGCSWIELRPRTNCK 1106
            G+I APL+KVLL+DGKT RV+LA+ SGLEASQEAITEYRVLGP+INGCSWIEL PRT+ K
Sbjct: 292  GVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRK 351

Query: 1107 HQLRVHCAEALGTPIVGDYKYGWFVHSRWKQLPRVDYEATTGEPYKMRRPEGLDVHKGSV 1286
            HQLRVHCAEALGTPIVGDYKYGWFVH RWKQ+PRVD E TTG+PYKMRRPEGLDV KGSV
Sbjct: 352  HQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSV 411

Query: 1287 LSKVPRLHLHCREMVLPNIAKFIELHNWQSRKSGVDPE---ERDILRFIAPMPSHMKISW 1457
            LSKVP LHLHCRE++LPNIAKF+ + + + +     P+   + DILRF+A MP+HMKISW
Sbjct: 412  LSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISW 471

Query: 1458 NLMSSYLV 1481
            NLMSSYLV
Sbjct: 472  NLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  634 bits (1636), Expect = e-179
 Identities = 320/490 (65%), Positives = 383/490 (78%), Gaps = 14/490 (2%)
 Frame = +3

Query: 54   KQQSKIRPPPPVYS-PVIRVSNNIVHLGLPKEGPKPRQLLSLPPFPGHPLPGRNSTSAA- 227
            +  S+I PP P  + PVIRVSNN+  LG PKEGPKPRQLLSLPPFP HPLPG++  + + 
Sbjct: 17   RHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSLVNVSG 76

Query: 228  ---YVTAISWLRYYFNEIPPLVIQKHFNEGLVQSTRG----LSRCYEGQAMSTKKIRPND 386
               +VTAISW++YYF+EIP  V+Q HFN+GLV   R      S   EGQ    +KI+PN+
Sbjct: 77   LPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKPNE 136

Query: 387  IMEVGARVHVPVSVAESKVSKRFDVIPSATLNPNADEIEYIRRL--VMYKDSAILVLNKP 560
            +ME G R++VPVSVAE+++SKRFD IPS TL+PNADEIEY++RL  + ++D AILVLNKP
Sbjct: 137  VMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQDPAILVLNKP 196

Query: 561  PNLPVKGPVTIHNSMDALAAASLSYNYDEGPKLVCRLDRESSGLLLMGRTKESISYLQWL 740
            P +P+KG + +HNSMDALAAA+L+++Y+EGPKLV RLDRESSGLLLMGRTKES+++L WL
Sbjct: 197  PKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWL 256

Query: 741  FSDTKKTMSFSKXXXXXXXXXXXXXXXXXXXXXXXXKEWNDACDTTYQRYWALVIGSPKQ 920
            FSD  K  S SK                          W+DAC+ T QRYWALVIGSPKQ
Sbjct: 257  FSDINKAKSLSKA-------------------------WDDACEATCQRYWALVIGSPKQ 291

Query: 921  KEGLICAPLTKVLLNDGKTARVMLAHNSGLEASQEAITEYRVLGPIINGCSWIELRPRTN 1100
            KEG+I APL+KVLL+DGKT RV+LA+ SGLEASQEAITEYRVLGP+INGCSWIEL PRT+
Sbjct: 292  KEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTS 351

Query: 1101 CKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQLPRVDYEATTGEPYKMRRPEGLDVHKG 1280
             KHQLRVHCAEALGTPIVGDYKYGWFVH RWKQ+PRVD E TTG+PYKMRRPEGLDV KG
Sbjct: 352  RKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKG 411

Query: 1281 SVLSKVPRLHLHCREMVLPNIAKFIELHNWQSRKSGVDPE---ERDILRFIAPMPSHMKI 1451
            SVLSKVP LHLHCRE++LPNIAKF+ + + + +     P+   + DILRF+A MP+HMKI
Sbjct: 412  SVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKI 471

Query: 1452 SWNLMSSYLV 1481
            SWNLMSSYLV
Sbjct: 472  SWNLMSSYLV 481


>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
            max]
          Length = 554

 Score =  632 bits (1630), Expect = e-179
 Identities = 315/487 (64%), Positives = 377/487 (77%), Gaps = 7/487 (1%)
 Frame = +3

Query: 42   VFKHKQQSKIRPPPPV-YSPVIRVSNNIVHLGLPKEGPKPRQLLSLPPFPGHPLPGRNST 218
            +F  +  S+I+PP PV   PVI VSNNI  L  PKEGPKPRQLLSLPPFPGHPLP ++S 
Sbjct: 93   LFVARHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSI 152

Query: 219  SAA----YVTAISWLRYYFNEIPPLVIQKHFNEGLVQSTRGLSRCYEGQAMST-KKIRPN 383
            S +    YVTA++W++YYF      VI+ HF EGLVQ     S   + + M   +KIRPN
Sbjct: 153  SGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQKEEQMKPMRKIRPN 212

Query: 384  DIMEVGARVHVPVSVAESKVSKRFDVIPSATLNPNADEIEYIRRLVMYKDSAILVLNKPP 563
            ++M+ GARVHVPVS+ E+++SKR+D IPS TL PNADEI+Y++RLV+YKDSAI+VLNKPP
Sbjct: 213  EVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPP 272

Query: 564  NLPVKGPVTIHNSMDALAAASLSYNYDEGPKLVCRLDRESSGLLLMGRTKESISYLQWLF 743
             LPVKG + +HNSMDALAAA+LSY+YDEGPKLV RLDRESSG+LL+GRTK+S+S+LQWLF
Sbjct: 273  KLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLF 332

Query: 744  SDTKKTMSFSKXXXXXXXXXXXXXXXXXXXXXXXXKEWNDACDTTYQRYWALVIGSPKQK 923
            S+     S                           K+WN+AC+ TYQRYWALVIG+PK+K
Sbjct: 333  SNINNAKS-------------------------SCKDWNEACEATYQRYWALVIGTPKEK 367

Query: 924  EGLICAPLTKVLLNDGKTARVMLAHNSGLEASQEAITEYRVLGPIINGCSWIELRPRTNC 1103
            EG+I APL+KVLLNDGKT R++LAH+S +E  QEA+TEYRVLGP INGCSW+ELRP T  
Sbjct: 368  EGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYR 427

Query: 1104 KHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQLPRVDYEATTGEPYKMRRPEGLDVHKGS 1283
            KHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQ+PRVD E TTG+PYK+RRPEGLDV KGS
Sbjct: 428  KHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGS 487

Query: 1284 VLSKVPRLHLHCREMVLPNIAKFIELHNWQSRKSGVD-PEERDILRFIAPMPSHMKISWN 1460
            VLSKVP LHLHCRE+VLPNI KF+ + N  S +      E+ D+LRF+A MPSHM+ISWN
Sbjct: 488  VLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWN 547

Query: 1461 LMSSYLV 1481
            LMSSYLV
Sbjct: 548  LMSSYLV 554


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  618 bits (1593), Expect = e-174
 Identities = 309/482 (64%), Positives = 367/482 (76%), Gaps = 9/482 (1%)
 Frame = +3

Query: 63   SKIRPPPPVYS-PVIRVSNNIVHLGLPKEGPKPRQLLSLPPFPGHPLPGRN----STSAA 227
            S+I PPPP Y+ P+IRVSNNI  LG PKEGPK RQLLSLPPFPG+PLPG+N    S  + 
Sbjct: 17   SRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQVGVSGEST 76

Query: 228  YVTAISWLRYYFNEIPPLVIQKHFNEGLVQ----STRGLSRCYEGQAMSTKKIRPNDIME 395
            +VTAI W++YYF+EI    IQ HF +GLVQ       GL    +G     +KIR  +IME
Sbjct: 77   HVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDE--KGNLKPMRKIRSGEIME 134

Query: 396  VGARVHVPVSVAESKVSKRFDVIPSATLNPNADEIEYIRRLVMYKDSAILVLNKPPNLPV 575
             GAR+H+PVSVAE KV++RFD IPS TL PNADEI+Y++RLV YKDSAI+VLNKPP LPV
Sbjct: 135  TGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKPPKLPV 194

Query: 576  KGPVTIHNSMDALAAASLSYNYDEGPKLVCRLDRESSGLLLMGRTKESISYLQWLFSDTK 755
            KG + +HNSMDALA A+LSY+YD+GPKLV RLDRESSG+LLMGRTKES+ +LQWLFS+ +
Sbjct: 195  KGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWLFSNIR 254

Query: 756  KTMSFSKXXXXXXXXXXXXXXXXXXXXXXXXKEWNDACDTTYQRYWALVIGSPKQKEGLI 935
                                           K W +AC+ TYQ+YWALVIG P+++EG+I
Sbjct: 255  NA-------------------------KFTCKAWEEACNATYQKYWALVIGCPREREGVI 289

Query: 936  CAPLTKVLLNDGKTARVMLAHNSGLEASQEAITEYRVLGPIINGCSWIELRPRTNCKHQL 1115
             APL+KVLL+DGKT RV+LA+ + +EASQEAITEYRVLGP INGCSWIEL PRT+ KHQL
Sbjct: 290  SAPLSKVLLDDGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQL 349

Query: 1116 RVHCAEALGTPIVGDYKYGWFVHSRWKQLPRVDYEATTGEPYKMRRPEGLDVHKGSVLSK 1295
            R+HCAEALGTPIVGDYKYGWFVH RWKQ+PRVD E  +G PYK+RRPEGLDV KGSVLSK
Sbjct: 350  RIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSK 409

Query: 1296 VPRLHLHCREMVLPNIAKFIELHNWQSRKSGVDPEERDILRFIAPMPSHMKISWNLMSSY 1475
            VP LHLHCRE+VLPNIAKF+ +   +     V   + D+LRF+A MPSHM+ISWNLMSSY
Sbjct: 410  VPLLHLHCRELVLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSY 469

Query: 1476 LV 1481
            LV
Sbjct: 470  LV 471