BLASTX nr result
ID: Salvia21_contig00009616
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00009616 (3161 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 1591 0.0 ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 1555 0.0 ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1555 0.0 ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S... 1549 0.0 gb|AFW57310.1| RNA polymerase II large subunit family protein [Z... 1542 0.0 >ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis vinifera] Length = 1848 Score = 1591 bits (4120), Expect = 0.0 Identities = 788/874 (90%), Positives = 839/874 (95%) Frame = +1 Query: 1 FLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEA 180 FLGHTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELIRAAQE+QLEA Sbjct: 663 FLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEA 722 Query: 181 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTAC 360 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTAC Sbjct: 723 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTAC 782 Query: 361 VGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGL 540 VGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGL Sbjct: 783 VGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGL 842 Query: 541 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLE 720 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q L+ Sbjct: 843 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLD 902 Query: 721 SLKLKRSDFNDMYKYEIDHPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLG 900 SLK+K+ +F+ ++KYEID NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR+QLG Sbjct: 903 SLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLG 962 Query: 901 TEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGD 1080 TEIATTGDNSWP+PVN+KRL+ NAQKTF+VD RRPSDMHPMEIVEAVDKLQERLKVV GD Sbjct: 963 TEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGD 1022 Query: 1081 DYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEM 1260 D +S+EAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WV+GEIESRFLQSLVA GEM Sbjct: 1023 DLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEM 1082 Query: 1261 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPG 1440 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP Sbjct: 1083 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPD 1142 Query: 1441 VSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPKSTIIEEDVEFVTSYFEMPDDDVDP 1620 VSKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDP STIIEEDV+FV SY+EMPD++V P Sbjct: 1143 VSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAP 1202 Query: 1621 DKISPWLLRIELNREMMVDKKLNMADISHKINAEFDSDLTCIFNDDNAEKLILRIRIMND 1800 +KISPWLLRIELNREMMVDKKL+MADI+ KIN EFD DLTCIFNDDNAEKLILRIRIMND Sbjct: 1203 EKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMND 1262 Query: 1801 EAPKGELNDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGFKAEN 1980 EAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK+GKVNKFDE+EGFK E Sbjct: 1263 EAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKPEV 1322 Query: 1981 EWMLDTEGVNLLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSY 2160 EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSY Sbjct: 1323 EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSY 1382 Query: 2161 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLR 2340 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+LR Sbjct: 1383 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLR 1442 Query: 2341 GVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPY 2520 GVTENIMLGQLAPIGTGDCALY+N++ML+ AIE+ LPSYME GL+FGMTP RSPI+GTPY Sbjct: 1443 GVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPITGTPY 1501 Query: 2521 HDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGMAF 2622 HDGMMSPNY+LSPNLRLSP++DAQFSPYVGGMAF Sbjct: 1502 HDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535 >ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] Length = 1853 Score = 1555 bits (4025), Expect = 0.0 Identities = 769/874 (87%), Positives = 826/874 (94%) Frame = +1 Query: 1 FLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEA 180 FLGHTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+ AKNEV LI+ AQE+ LE Sbjct: 663 FLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEP 722 Query: 181 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTAC 360 EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTAC Sbjct: 723 EPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTAC 782 Query: 361 VGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGL 540 VGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGL Sbjct: 783 VGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGL 842 Query: 541 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLE 720 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+ Sbjct: 843 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLD 902 Query: 721 SLKLKRSDFNDMYKYEIDHPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLG 900 SLK+K+ +F +++YE + NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADRYQLG Sbjct: 903 SLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLG 962 Query: 901 TEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGD 1080 TEIATTG+NSWP+PVN+KRL+ NAQKTF++DFRR SDMHPMEIVEA+DKLQERLKVV G+ Sbjct: 963 TEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGE 1022 Query: 1081 DYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEM 1260 D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WV+GEIESRFLQSLVA GEM Sbjct: 1023 DPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEM 1082 Query: 1261 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPG 1440 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKP Sbjct: 1083 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPE 1142 Query: 1441 VSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPKSTIIEEDVEFVTSYFEMPDDDVDP 1620 +KTKE+AK VQCALEYTTLRSVTQATEVWYDPDP STIIEED++FV SY+EMPD+++ P Sbjct: 1143 ANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAP 1202 Query: 1621 DKISPWLLRIELNREMMVDKKLNMADISHKINAEFDSDLTCIFNDDNAEKLILRIRIMND 1800 +KISPWLLRIELNREMMVDKKL+MA+I+ KIN EFD DLTCIFNDDNAEKLILRIRIMND Sbjct: 1203 EKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMND 1262 Query: 1801 EAPKGELNDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGFKAEN 1980 EAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK GKVNKFDENEGFK E Sbjct: 1263 EAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEM 1322 Query: 1981 EWMLDTEGVNLLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSY 2160 EWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSY Sbjct: 1323 EWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSY 1382 Query: 2161 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLR 2340 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+LR Sbjct: 1383 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLR 1442 Query: 2341 GVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPY 2520 GVTENIMLGQLAPIGTG CALY+N+EMLK AIE+ LPSY++ GL+FGMTP RSPISGTPY Sbjct: 1443 GVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGTPY 1501 Query: 2521 HDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGMAF 2622 H+GMMSPNY+LSPNLRLSP+SDAQFSPYVGGMAF Sbjct: 1502 HEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] Length = 1832 Score = 1555 bits (4025), Expect = 0.0 Identities = 769/874 (87%), Positives = 826/874 (94%) Frame = +1 Query: 1 FLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEA 180 FLGHTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+ AKNEV LI+ AQE+ LE Sbjct: 663 FLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEP 722 Query: 181 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTAC 360 EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTAC Sbjct: 723 EPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTAC 782 Query: 361 VGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGL 540 VGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGL Sbjct: 783 VGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGL 842 Query: 541 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLE 720 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+ Sbjct: 843 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLD 902 Query: 721 SLKLKRSDFNDMYKYEIDHPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLG 900 SLK+K+ +F +++YE + NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADRYQLG Sbjct: 903 SLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLG 962 Query: 901 TEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGD 1080 TEIATTG+NSWP+PVN+KRL+ NAQKTF++DFRR SDMHPMEIVEA+DKLQERLKVV G+ Sbjct: 963 TEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGE 1022 Query: 1081 DYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEM 1260 D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WV+GEIESRFLQSLVA GEM Sbjct: 1023 DPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEM 1082 Query: 1261 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPG 1440 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKP Sbjct: 1083 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPE 1142 Query: 1441 VSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPKSTIIEEDVEFVTSYFEMPDDDVDP 1620 +KTKE+AK VQCALEYTTLRSVTQATEVWYDPDP STIIEED++FV SY+EMPD+++ P Sbjct: 1143 ANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAP 1202 Query: 1621 DKISPWLLRIELNREMMVDKKLNMADISHKINAEFDSDLTCIFNDDNAEKLILRIRIMND 1800 +KISPWLLRIELNREMMVDKKL+MA+I+ KIN EFD DLTCIFNDDNAEKLILRIRIMND Sbjct: 1203 EKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMND 1262 Query: 1801 EAPKGELNDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGFKAEN 1980 EAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK GKVNKFDENEGFK E Sbjct: 1263 EAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEM 1322 Query: 1981 EWMLDTEGVNLLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSY 2160 EWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSY Sbjct: 1323 EWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSY 1382 Query: 2161 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLR 2340 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+LR Sbjct: 1383 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLR 1442 Query: 2341 GVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPY 2520 GVTENIMLGQLAPIGTG CALY+N+EMLK AIE+ LPSY++ GL+FGMTP RSPISGTPY Sbjct: 1443 GVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGTPY 1501 Query: 2521 HDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGMAF 2622 H+GMMSPNY+LSPNLRLSP+SDAQFSPYVGGMAF Sbjct: 1502 HEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor] gi|241940227|gb|EES13372.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor] Length = 1857 Score = 1549 bits (4011), Expect = 0.0 Identities = 765/875 (87%), Positives = 828/875 (94%), Gaps = 1/875 (0%) Frame = +1 Query: 1 FLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEA 180 FLGHTQWLVNYWLLQN FS+GIGDTIAD TM I++TI KAK+EV ELI+ A EKQLEA Sbjct: 662 FLGHTQWLVNYWLLQNGFSIGIGDTIADASTMQTINDTICKAKDEVKELIKKAHEKQLEA 721 Query: 181 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTAC 360 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTAC Sbjct: 722 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTAC 781 Query: 361 VGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGL 540 VGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGL Sbjct: 782 VGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGL 841 Query: 541 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLE 720 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+ Sbjct: 842 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLD 901 Query: 721 SLKLKRSDFNDMYKYEIDHPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLG 900 SLK+K+ +F+++++YE+D NW PNYMLPE V+DLKTIRE R+VF+AEVQKLEADRYQLG Sbjct: 902 SLKMKKPEFDNLFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQLG 961 Query: 901 TEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGD 1080 TEIATTGDNSWP+PVN+KRL+ NAQKTFR+DFRRPSDMHPMEIVEAVDKLQERLKVV GD Sbjct: 962 TEIATTGDNSWPMPVNLKRLIWNAQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVVPGD 1021 Query: 1081 DYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEM 1260 D +S+EAQKNATLFFNILLRS ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA GEM Sbjct: 1022 DPMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEM 1081 Query: 1261 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPG 1440 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP Sbjct: 1082 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPE 1141 Query: 1441 VSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPKSTIIEEDVEFVTSYFEMPDDDVDP 1620 V++ KE AKNVQCALEYTTLRSVT ATE+WYDPDP TIIEED EFV SY+EMPD+D+DP Sbjct: 1142 VNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFVQSYYEMPDEDIDP 1201 Query: 1621 DKISPWLLRIELNREMMVDKKLNMADISHKINAEFDSDLTCIFNDDNAEKLILRIRIMND 1800 DKISPWLLRIELNREMMVDKKL+MADI+ KIN EFD DL+CIFNDDNA+KLILRIRI ND Sbjct: 1202 DKISPWLLRIELNREMMVDKKLSMADIADKINREFDDDLSCIFNDDNADKLILRIRITND 1261 Query: 1801 EAPKGELNDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGFKAEN 1980 EAPKGE+ DESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIK GKVN F ++EGFKA N Sbjct: 1262 EAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKVNTFYQDEGFKAAN 1321 Query: 1981 EWMLDTEGVNLLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSY 2160 EWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSY Sbjct: 1322 EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSY 1381 Query: 2161 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLR 2340 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D+LR Sbjct: 1382 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDHLR 1441 Query: 2341 GVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPY 2520 GVTENIMLGQLAPIGTG CALY+N++ML+QAIE+ LPSY+E GL+FGMTP RSPISGTPY Sbjct: 1442 GVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVE-GLDFGMTPARSPISGTPY 1500 Query: 2521 HDGMMSPNYMLSPNLRLSPV-SDAQFSPYVGGMAF 2622 H+GMMSP+Y+LSPN+R SP+ +DA FSPYVG MAF Sbjct: 1501 HEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1535 >gb|AFW57310.1| RNA polymerase II large subunit family protein [Zea mays] Length = 1850 Score = 1542 bits (3992), Expect = 0.0 Identities = 758/875 (86%), Positives = 826/875 (94%), Gaps = 1/875 (0%) Frame = +1 Query: 1 FLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEA 180 FLGHTQWLVNYWLLQN FS+GIGDTIAD TM I++TI+KAKN V ELI+ A EKQLEA Sbjct: 662 FLGHTQWLVNYWLLQNGFSIGIGDTIADASTMETINDTISKAKNAVKELIKKAHEKQLEA 721 Query: 181 EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTAC 360 EPGRTMMESFENRVNQVLNKARDDAGSSAQ SL+ESNNLKAMVTAGSKGSFINISQMTAC Sbjct: 722 EPGRTMMESFENRVNQVLNKARDDAGSSAQNSLSESNNLKAMVTAGSKGSFINISQMTAC 781 Query: 361 VGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGL 540 VGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGL Sbjct: 782 VGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGL 841 Query: 541 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLE 720 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+ Sbjct: 842 IDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLD 901 Query: 721 SLKLKRSDFNDMYKYEIDHPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLG 900 SLK+K+ +F+++++YE+D NW PNYMLPE V+DLKTIRE R+VF+AEVQKLEADRYQLG Sbjct: 902 SLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQLG 961 Query: 901 TEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGD 1080 +EI TTGDNSWP+PVN+KRL+ NAQKTF++DFRRPSDMHPMEIVEA+DKLQERLKVV GD Sbjct: 962 SEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGD 1021 Query: 1081 DYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEM 1260 D +S+EAQKNATLFFNILLRS ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA GEM Sbjct: 1022 DAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEM 1081 Query: 1261 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPG 1440 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP Sbjct: 1082 IGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPQ 1141 Query: 1441 VSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPKSTIIEEDVEFVTSYFEMPDDDVDP 1620 V++ KE AKNVQCALEYTTLRSVT ATE+WYDPDP TIIEED EFV SY+EMPD+D+DP Sbjct: 1142 VNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDTEFVQSYYEMPDEDIDP 1201 Query: 1621 DKISPWLLRIELNREMMVDKKLNMADISHKINAEFDSDLTCIFNDDNAEKLILRIRIMND 1800 DKISPWLLRIELNREMMVDKKL+MADI+ KIN EFD DL+CIFNDDNA+KLILRIRI ND Sbjct: 1202 DKISPWLLRIELNREMMVDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRITND 1261 Query: 1801 EAPKGELNDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGFKAEN 1980 EAPKGE+ DESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIK GKVN F +++GFKA N Sbjct: 1262 EAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKVNTFYQDDGFKAAN 1321 Query: 1981 EWMLDTEGVNLLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSY 2160 EWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSY Sbjct: 1322 EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSY 1381 Query: 2161 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLR 2340 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D+LR Sbjct: 1382 VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDHLR 1441 Query: 2341 GVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPY 2520 GVTENIMLGQLAPIGTG CALY+N++ML+QAIE+ LPSY+E GL+FGMTP RSPI+GTPY Sbjct: 1442 GVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVE-GLDFGMTPARSPITGTPY 1500 Query: 2521 HDGMMSPNYMLSPNLRLSPV-SDAQFSPYVGGMAF 2622 H+GMMSP+Y+LSPN+R SP+ +DA FSPYVG MAF Sbjct: 1501 HEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1535