BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00009113
         (3384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...  1403   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1358   0.0  
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]             1308   0.0  
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]             1305   0.0  
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1298   0.0  

>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 1403 bits (3632), Expect = 0.0
 Identities = 703/1104 (63%), Positives = 855/1104 (77%), Gaps = 5/1104 (0%)
 Frame = +3

Query: 45   EARPTLTVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHGRVQFESP 224
            E R T TV+V+NIP  AIAK L  F ES +GKG+VFA +IF+E +NWKSRGHGRVQFE+ 
Sbjct: 4    EKRVTATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETS 63

Query: 225  EAKIEALSLSHHRKLLFKGFYLSVTHSLEDIIIRPVDPIYRVGDGGGLVLFAGIMIRADC 404
            ++K+++LSLS   KL+FKG  L +T S +DII RP++  YR   G   +L  GI++  D 
Sbjct: 64   QSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKG---ILHTGILLENDY 120

Query: 405  MGTLESWNGMKLWFMPERKKIHFFVDHG-GESYKLEVQFGDVLESRGCCLGGGDMKVDAI 581
            M  LE+W  +K   MPERK + F+V H  GE Y+LEVQFGD++E+  C L   + +  A+
Sbjct: 121  MEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSL---EDEKTAL 177

Query: 582  LLKLRHAPKIFKKVSGPKIASRFTTDRYHICKEDYDFIWVRTTDFSSMKSIGYLSSLCWE 761
            LLKL+HAPK++++VSGP +AS+F++DRYH+C+ED +F+WVRTTDFS+MKSIG  SS CWE
Sbjct: 178  LLKLKHAPKLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWE 237

Query: 762  IEEGFSNLDLYTSLPYYTKEVTELAFEEV-QFNHASDLVPIVKNDSVFQVAYEVLFQLNS 938
            IE+G  + DL + LPY   +V +L  +EV     AS+LVP+    S  ++ YE+LFQLNS
Sbjct: 238  IEDGLLSSDLLSGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNS 297

Query: 939  LVHCQKLSLAAVNTDLFQILSRLDMDTALLILKEMHKLHSTCXXXXXXXXXXXXXXXXXX 1118
            L+H  K+SL AV TDL ++LS+L++DTA++IL++MHKL STC                  
Sbjct: 298  LIHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLH------ 351

Query: 1119 XXXXXXXXXXXXXXXXXXXXXXXXXITTHNHKNLPSA-YKRLIEHNIMSCHRVLVTPTKI 1295
                                     +   N KN PS+ Y RL+  N+MS HRVLVTP+K+
Sbjct: 352  -------------------------VLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKV 386

Query: 1296 FCLGPELESSNYIVKNFALDASDFMRVTFVDEDWGRLSPGAVSTSIMKGIFAKPYRTDIY 1475
            +CLGPELE+SNYIVKNFAL ASDF+RVTFV+EDWG+LSP A+S S+ +GIFAKPYRT IY
Sbjct: 387  YCLGPELETSNYIVKNFALHASDFLRVTFVEEDWGKLSPNAISMSVEQGIFAKPYRTKIY 446

Query: 1476 RRILSVLQDGLVIGDKKFEFLAFSASQLRSNSVWMFASNDHVKAEDIREWMGCFNKIRSI 1655
             RILS+L+DGLVIG K+F FLAFSASQLRSNSVWMFASN+HVKAEDIREWMGCFNKIRS+
Sbjct: 447  HRILSILRDGLVIGSKRFLFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSV 506

Query: 1656 SKCAARMGQLFSSSMQTLQVIPRDVELIPEIEVVSDGVKHCFSDGIGKISIPFAREVVRK 1835
            SKCAARMGQLFS+S QT++V    VE++P+IEV SDGV +CFSDGIGKIS  FA +V +K
Sbjct: 507  SKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGIGKISQAFASQVAQK 566

Query: 1836 LGLSHIPSAFQIRYGGYKGVIAVNRHSFRKLSLRSSMLKFESTNRMLNITKWSESQPCYL 2015
             GLS+ PSAFQIRYGGYKGVIAV+R+SFRKLSLR SMLKFES NRMLNITKWS++ PCYL
Sbjct: 567  CGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYL 626

Query: 2016 NREIITLLSTLGVKDSVFLAMQDEQLQLLGTMLTDAKAALNVLESTGGGDMKSSMARMLL 2195
            NREI+ LLSTLGV+D VF  + D  L LLG MLT  +AAL+VLES GGGD+K  + RML 
Sbjct: 627  NREIVILLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEAALDVLESIGGGDVKKILMRMLH 686

Query: 2196 QGYDPRNEPYLLTMLQSYLENQISDIRSRCRIFVPKGRVLVGCLDESGTLEYGQVFVRLT 2375
            QGY P  EPYL  MLQS+ ENQ+SD+RSRCRIF+ KGRVLVGCLDE+G L YGQV+ R+T
Sbjct: 687  QGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIHKGRVLVGCLDETGILNYGQVYARIT 746

Query: 2376 MNTAELEGGDQPFFQRVDETTSILRGKVVVTKNPCLHPGDVRVLEAVYDIKLQEDNMVDC 2555
            M  AEL+   Q FFQ+VDETT+++RG VVVTKNPCLHPGDVRVLEAVY++ L+E   VDC
Sbjct: 747  MTKAELQSAQQSFFQKVDETTAVVRGNVVVTKNPCLHPGDVRVLEAVYEVALEEKAWVDC 806

Query: 2556 LVFPQKGERPHPNECSGGDLDGDLYFISWDVDLVPPRTVTPMDYTGRRPRIMNHEVTLEE 2735
            ++FPQKGERPHPNECSGGDLDGDLYFISWD +L+P +TVTPMDYTGRR RIM+HEVTL+E
Sbjct: 807  IIFPQKGERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPMDYTGRRTRIMDHEVTLQE 866

Query: 2736 IQTFFADYMISDTLGAISNAHLVHADREPEKALSPKCLELANLHSMAVDFAKTGAPAEMP 2915
            IQ FF DYMISDTLGAIS AHLVHADREP+KAL+PKCL+LA LHSMAVDFAKTGA AEMP
Sbjct: 867  IQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMP 926

Query: 2916 RYLKPREFPDFMERWEKPTYVSHGALGKLYRATVQFIQKMKTNPDLPDEIP--PNAFDPD 3089
            R+LKPREFPDF+ERW+KP Y+S G LGKLYRA V     +++N D    +    +A+D  
Sbjct: 927  RFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVN--SSVRSNSDDLGSVRAIQDAYDHA 984

Query: 3090 LVVDGYESFVAAAECHKEQYLDRMNALFSYYGAESEVEILTGNLHRKSAYLQYDNRRYGE 3269
            L+ DGYE+F+  A+ HKE YLDRMN+L +YYGAE EVEILTGNL +KS YLQ DNRRY E
Sbjct: 985  LLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFE 1044

Query: 3270 VKERILVSVKSLMKEVKGWFRSSC 3341
            +K+RILVS KSL KEVKGWF   C
Sbjct: 1045 LKDRILVSAKSLQKEVKGWFTGCC 1068


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1358 bits (3515), Expect = 0.0
 Identities = 688/1095 (62%), Positives = 848/1095 (77%), Gaps = 2/1095 (0%)
 Frame = +3

Query: 63   TVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHGRVQFESPEAKIEA 242
            TVKV+NIP  AIAK+L +FLES LG  T++A+EI TE +NWKSRG GRVQFE+ +AK  A
Sbjct: 8    TVKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQFETLQAKRAA 67

Query: 243  LSLSHHRKLLFKGFYLSVTHSLEDIIIRPVDPIYRVGDGGGLVLFAGIMIRADCMGTLES 422
              LS    L+F+G  LS++ + +DII+RPV+P  +V  G   VL  G ++  DCM  LES
Sbjct: 68   DLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSG---VLHVGFLVEDDCMLVLES 124

Query: 423  WNGMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGCCLGGGDMKVDAILLKLRHA 602
            W G+K   MPER ++ F+VD  GE YKLEV F DVLES  CCLGGG  KV+A+LLKL++A
Sbjct: 125  WEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGG--KVNALLLKLKYA 182

Query: 603  PKIFKKVSGPKIASRFTTDRYHICKEDYDFIWVRTTDFSSMKSIGYLSSLCWEIEEGFSN 782
            PKIF+K +GP IAS+F+ DRYHI KED +F+W+RTTDFSS+KS+G  +S CWEI+EGF  
Sbjct: 183  PKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPA 242

Query: 783  LDLYTSLPYYTKEVTELAFEEVQ-FNHASDLVPIVKNDSVFQVAYEVLFQLNSLVHCQKL 959
            LD++ S PYY K++TEL  E+ + F   S LVP+VK +S  ++AYE+LFQLNSLVH QK+
Sbjct: 243  LDIFASFPYY-KDLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLVHAQKI 301

Query: 960  SLAAVNTDLFQILSRLDMDTALLILKEMHKLHSTCXXXXXXXXXXXXXXXXXXXXXXXXX 1139
            SLAAV+TDL +ILS L +DTA++IL+++HK  ST                          
Sbjct: 302  SLAAVDTDLIEILSNLPVDTAIMILQKLHKRKST-------------------------- 335

Query: 1140 XXXXXXXXXXXXXXXXXXITTHNHKNLP-SAYKRLIEHNIMSCHRVLVTPTKIFCLGPEL 1316
                              I   N KNLP S++ RL  +N+MSCHRVLVTP+KI+CLGPEL
Sbjct: 336  -----RYDPISFIKAQAHIINMNIKNLPPSSHSRLTNNNVMSCHRVLVTPSKIYCLGPEL 390

Query: 1317 ESSNYIVKNFALDASDFMRVTFVDEDWGRLSPGAVSTSIMKGIFAKPYRTDIYRRILSVL 1496
            ESSNY+VK++A  ASDF+RV+FV+EDW +L   A+S SI K  FA P+RT+IY RILS+L
Sbjct: 391  ESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSIL 450

Query: 1497 QDGLVIGDKKFEFLAFSASQLRSNSVWMFASNDHVKAEDIREWMGCFNKIRSISKCAARM 1676
            ++G+VIG K+F+FLAFSASQLRSNSVWMFASND V+ +DIREWMGCF KIRS+SKCAARM
Sbjct: 451  REGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARM 510

Query: 1677 GQLFSSSMQTLQVIPRDVELIPEIEVVSDGVKHCFSDGIGKISIPFAREVVRKLGLSHIP 1856
            GQLFSSS+QTL V  +DVE+IP+IEV SDG  +CFSDGIGKIS+ FA++V +K GL   P
Sbjct: 511  GQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTP 570

Query: 1857 SAFQIRYGGYKGVIAVNRHSFRKLSLRSSMLKFESTNRMLNITKWSESQPCYLNREIITL 2036
            SAFQIRYGGYKGVIAV+R+SFRKLSLRSSMLKFES NRMLN+TKWSES PCYLNREI++L
Sbjct: 571  SAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSL 630

Query: 2037 LSTLGVKDSVFLAMQDEQLQLLGTMLTDAKAALNVLESTGGGDMKSSMARMLLQGYDPRN 2216
            LSTLGV+D  F A+ +EQ+ LL  MLT+ +AAL+VLES GG D K+ +A+MLLQGY+P  
Sbjct: 631  LSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPNV 690

Query: 2217 EPYLLTMLQSYLENQISDIRSRCRIFVPKGRVLVGCLDESGTLEYGQVFVRLTMNTAELE 2396
            EPYL  MLQ+Y E+Q+SDIR+RCRIFVPK RVL+GCLDE+G L YGQV+VR+TM  AE +
Sbjct: 691  EPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHK 750

Query: 2397 GGDQPFFQRVDETTSILRGKVVVTKNPCLHPGDVRVLEAVYDIKLQEDNMVDCLVFPQKG 2576
              +Q FFQ+VD+TTS++ GKV+VTKNPCLHPGD+RVL+AVY+++L+E  +VDC++FPQKG
Sbjct: 751  CRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKG 810

Query: 2577 ERPHPNECSGGDLDGDLYFISWDVDLVPPRTVTPMDYTGRRPRIMNHEVTLEEIQTFFAD 2756
            ERPHPNECSGGDLDGD +FI WD  L+P +T  PMDYT RRPRIM+H+VTLEEIQ FF D
Sbjct: 811  ERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVD 870

Query: 2757 YMISDTLGAISNAHLVHADREPEKALSPKCLELANLHSMAVDFAKTGAPAEMPRYLKPRE 2936
            YMI+DTLG IS AHLVHADREPEKA S KCLELA LHSMAVDFAKTGAPAEMPR LKP+E
Sbjct: 871  YMINDTLGVISTAHLVHADREPEKARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKE 930

Query: 2937 FPDFMERWEKPTYVSHGALGKLYRATVQFIQKMKTNPDLPDEIPPNAFDPDLVVDGYESF 3116
            FPDFMER +KP Y+S+GALGKLYRAT+      K++      IP  A+D DL VDG+E+F
Sbjct: 931  FPDFMERVDKPMYISNGALGKLYRATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETF 990

Query: 3117 VAAAECHKEQYLDRMNALFSYYGAESEVEILTGNLHRKSAYLQYDNRRYGEVKERILVSV 3296
            +  A+ HKE Y ++M  L ++YGAESE E+LTGNL  K  YLQ DNRR+ E+K+RIL+SV
Sbjct: 991  LEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISV 1050

Query: 3297 KSLMKEVKGWFRSSC 3341
            KSL KE K W   SC
Sbjct: 1051 KSLQKEAKEWLYGSC 1065


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1308 bits (3386), Expect = 0.0
 Identities = 662/1098 (60%), Positives = 825/1098 (75%), Gaps = 1/1098 (0%)
 Frame = +3

Query: 51   RPTLTVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHGRVQFESPEA 230
            RPTL  ++T+IP  A+AKDL  F ES LG  +VFA+EI T+R NWKSRG GRVQF +P+A
Sbjct: 8    RPTL--RLTHIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQA 65

Query: 231  KIEALSLSHHRKLLFKGFYLSVTHSLEDIIIRPVDPIYRVGDGGGLVLFAGIMIRADCMG 410
            K +AL LS H  LLFK   L ++ + +DII RP+   +R+ DGG  VL AG M   DC+ 
Sbjct: 66   KSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRL-DGG--VLHAGFMSSDDCLR 122

Query: 411  TLESWNGMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGCCLGGGDMKVDAILLK 590
             LE W G++ W MPER+++ F+V   GE YKL+  F D+ E+ GCC  G     +A+LL+
Sbjct: 123  VLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGS--ACNALLLR 180

Query: 591  LRHAPKIFKKVSGPKIASRFTTDRYHICKEDYDFIWVRTTDFSSMKSIGYLSSLCWEIEE 770
            +R+AP+I++KVSGP +AS+F+TDRYHICKE +DF+WVRTTDFS +KSIG  +S  WE   
Sbjct: 181  VRYAPRIYQKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNA 240

Query: 771  GFSNLDLYTSLPYYTKEVTELAFE-EVQFNHASDLVPIVKNDSVFQVAYEVLFQLNSLVH 947
            GFS  D+ T LP Y +++   + E   +F+  S++VP+VK  S  ++AYE+LFQLN+LVH
Sbjct: 241  GFSISDMSTYLPCYREDIQSPSLEARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALVH 300

Query: 948  CQKLSLAAVNTDLFQILSRLDMDTALLILKEMHKLHSTCXXXXXXXXXXXXXXXXXXXXX 1127
             QK+S+AAV+TDL  ILS L ++TA++IL+++  L S C                     
Sbjct: 301  TQKISIAAVDTDLIGILSGLPVETAVMILQKLRLLQSPCYNPVSFVKAKLP--------- 351

Query: 1128 XXXXXXXXXXXXXXXXXXXXXXITTHNHKNLPSAYKRLIEHNIMSCHRVLVTPTKIFCLG 1307
                                   T  N++   S  +RL  HN+MSC R L+TPTKI+CLG
Sbjct: 352  -----------------------TGKNYRIPLSVSERLKNHNVMSCRRALITPTKIYCLG 388

Query: 1308 PELESSNYIVKNFALDASDFMRVTFVDEDWGRLSPGAVSTSIMKGIFAKPYRTDIYRRIL 1487
            PELE++NY+VKNF   ASDFMRVTFV+EDW +LS  A+ST +  G+F++P++T IY RIL
Sbjct: 389  PELETANYVVKNFVEYASDFMRVTFVEEDWSKLSANAISTGVHLGVFSRPFKTKIYDRIL 448

Query: 1488 SVLQDGLVIGDKKFEFLAFSASQLRSNSVWMFASNDHVKAEDIREWMGCFNKIRSISKCA 1667
             VLQ+G+VIGDK+FEFLAFSASQLRSNSVWMFASND VKAEDIREWMGCF KIRSISKCA
Sbjct: 449  YVLQNGIVIGDKRFEFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCA 508

Query: 1668 ARMGQLFSSSMQTLQVIPRDVELIPEIEVVSDGVKHCFSDGIGKISIPFAREVVRKLGLS 1847
            +RMGQLFSSSM TL V  +DVE+I +IEV +DG+ +CFSDGIGKIS+PFAR+V  K GL+
Sbjct: 509  SRMGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLN 568

Query: 1848 HIPSAFQIRYGGYKGVIAVNRHSFRKLSLRSSMLKFESTNRMLNITKWSESQPCYLNREI 2027
            HIPSAFQIRYGGYKGV+AV+R+SF K+SLR SMLKFES  RMLN+TKWSES PC+LNREI
Sbjct: 569  HIPSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREI 628

Query: 2028 ITLLSTLGVKDSVFLAMQDEQLQLLGTMLTDAKAALNVLESTGGGDMKSSMARMLLQGYD 2207
            +TL STLG+KD VF  MQ+EQL LLG MLT+ +AAL+ L+S GG + K+ +  ML Q Y+
Sbjct: 629  VTLFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEML-QFYE 687

Query: 2208 PRNEPYLLTMLQSYLENQISDIRSRCRIFVPKGRVLVGCLDESGTLEYGQVFVRLTMNTA 2387
            P  +PYL  MLQ++ EN +SD++SRCRIFVPKGR+L+GCLDE+GTL YGQV++ + M  A
Sbjct: 688  PNVQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKA 747

Query: 2388 ELEGGDQPFFQRVDETTSILRGKVVVTKNPCLHPGDVRVLEAVYDIKLQEDNMVDCLVFP 2567
            ELE  DQ +F++VDE T+I+ GKVVVTKNPCLHPGDVRVLEAVY+ +L+E  +VDCLVFP
Sbjct: 748  ELECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFP 807

Query: 2568 QKGERPHPNECSGGDLDGDLYFISWDVDLVPPRTVTPMDYTGRRPRIMNHEVTLEEIQTF 2747
            QKGERPHPNECSGGDLDGD +FISWD DL+P +T  PMDYTGRRPRIM+HEVTLEEIQ F
Sbjct: 808  QKGERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKF 867

Query: 2748 FADYMISDTLGAISNAHLVHADREPEKALSPKCLELANLHSMAVDFAKTGAPAEMPRYLK 2927
            F DYMI+DTLGAIS AHLVHADREP+KA S  CL LA LHSMAVDFAKTGAPAEMPR LK
Sbjct: 868  FVDYMINDTLGAISTAHLVHADREPDKACSENCLALATLHSMAVDFAKTGAPAEMPRALK 927

Query: 2928 PREFPDFMERWEKPTYVSHGALGKLYRATVQFIQKMKTNPDLPDEIPPNAFDPDLVVDGY 3107
            PREFPDFM+R  KP Y S G LGKLYRAT+    + ++      E+    +D DL V+G+
Sbjct: 928  PREFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQTRSKFVWTKEMAELVYDHDLEVNGF 987

Query: 3108 ESFVAAAECHKEQYLDRMNALFSYYGAESEVEILTGNLHRKSAYLQYDNRRYGEVKERIL 3287
            ES ++ AE HKE Y +RM+ L SYY  E E EILTGN++ K+ +L  DNRRYGE+KERI+
Sbjct: 988  ESLISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNIYNKAQFLLRDNRRYGEMKERIV 1047

Query: 3288 VSVKSLMKEVKGWFRSSC 3341
            +SVK L +E K WF+SSC
Sbjct: 1048 LSVKDLQREAKEWFKSSC 1065


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1305 bits (3376), Expect = 0.0
 Identities = 661/1098 (60%), Positives = 825/1098 (75%), Gaps = 1/1098 (0%)
 Frame = +3

Query: 51   RPTLTVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHGRVQFESPEA 230
            RPTL  ++TNIP  A+AKDL  F ES LG  +VFA+EI T+R NWKSRG GRVQF +P+A
Sbjct: 8    RPTL--RLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQA 65

Query: 231  KIEALSLSHHRKLLFKGFYLSVTHSLEDIIIRPVDPIYRVGDGGGLVLFAGIMIRADCMG 410
              +AL LS H  LLFK   L ++ + +DII RP+   +R+ DGG  VL AG M   DC+ 
Sbjct: 66   MSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRL-DGG--VLHAGFMSSDDCLR 122

Query: 411  TLESWNGMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGCCLGGGDMKVDAILLK 590
             LE W G++ W MPER+++ F+V   GE YKL+  F D+ E+ GCC  G     +A+LL+
Sbjct: 123  VLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCFDGS--ACNALLLR 180

Query: 591  LRHAPKIFKKVSGPKIASRFTTDRYHICKEDYDFIWVRTTDFSSMKSIGYLSSLCWEIEE 770
            +R+AP+ ++KVSGP +AS+F+TDRYHICKE +DF+WVRTTDFS +KSIG  +S  WE   
Sbjct: 181  VRYAPRTYRKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNA 240

Query: 771  GFSNLDLYTSLPYYTKEVTELAFE-EVQFNHASDLVPIVKNDSVFQVAYEVLFQLNSLVH 947
            GFS  D+ T LP Y +++   + E   +F+  S++VP+VK  S  ++AYE+LFQLN+LVH
Sbjct: 241  GFSISDMSTYLPCYREDIQSPSLEARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNALVH 300

Query: 948  CQKLSLAAVNTDLFQILSRLDMDTALLILKEMHKLHSTCXXXXXXXXXXXXXXXXXXXXX 1127
             QK+S+AAV+TDL  ILS L ++TA++IL+++  L S C                     
Sbjct: 301  TQKISIAAVDTDLIGILSVLPVETAVMILQKLRLLQSPCYNPVSFVKAKLP--------- 351

Query: 1128 XXXXXXXXXXXXXXXXXXXXXXITTHNHKNLPSAYKRLIEHNIMSCHRVLVTPTKIFCLG 1307
                                   T  N +   S  +RL  HN+MSCHR L+TPTKI+CLG
Sbjct: 352  -----------------------TGKNFRIPLSVSERLKNHNVMSCHRALITPTKIYCLG 388

Query: 1308 PELESSNYIVKNFALDASDFMRVTFVDEDWGRLSPGAVSTSIMKGIFAKPYRTDIYRRIL 1487
            PELE++NY+VKNFA  ASDFMRVTFV+EDW +LS  A+ST +  G+F++P++T IY RIL
Sbjct: 389  PELETANYVVKNFAEYASDFMRVTFVEEDWSKLSANAISTGVHLGVFSRPFKTKIYDRIL 448

Query: 1488 SVLQDGLVIGDKKFEFLAFSASQLRSNSVWMFASNDHVKAEDIREWMGCFNKIRSISKCA 1667
            S+LQ+G+VIGDK+F+FLAFSASQLRSNSVWMFASND VKAEDIREWMGCF KIRSISKCA
Sbjct: 449  SILQNGIVIGDKRFKFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCA 508

Query: 1668 ARMGQLFSSSMQTLQVIPRDVELIPEIEVVSDGVKHCFSDGIGKISIPFAREVVRKLGLS 1847
            +RMGQLFSSSM TL V  +DVE+I +IEV +DG+ +CFSDGIGKIS+PFAR+V  K GL+
Sbjct: 509  SRMGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLN 568

Query: 1848 HIPSAFQIRYGGYKGVIAVNRHSFRKLSLRSSMLKFESTNRMLNITKWSESQPCYLNREI 2027
            HIPSAFQIRYGGYKGV+AV+R+SF K+SLR SMLKFES  RMLN+TKWSES PC+LNREI
Sbjct: 569  HIPSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREI 628

Query: 2028 ITLLSTLGVKDSVFLAMQDEQLQLLGTMLTDAKAALNVLESTGGGDMKSSMARMLLQGYD 2207
            +TL STLG+KD VF  MQ+EQL LLG MLT+ +AAL+ L+S GG + K+ +  ML Q  +
Sbjct: 629  VTLFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEML-QFDE 687

Query: 2208 PRNEPYLLTMLQSYLENQISDIRSRCRIFVPKGRVLVGCLDESGTLEYGQVFVRLTMNTA 2387
            P  +PYL  MLQ++ EN +SD++SRCRIFVPKGR+L+GCLDE+GTL YGQV++ + M  A
Sbjct: 688  PNVQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKA 747

Query: 2388 ELEGGDQPFFQRVDETTSILRGKVVVTKNPCLHPGDVRVLEAVYDIKLQEDNMVDCLVFP 2567
            ELE  DQ +F++VDE T+I+ GKVVVTKNPCLHPGDVRVLEAVY+ +L+E  +VDCLVFP
Sbjct: 748  ELECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFP 807

Query: 2568 QKGERPHPNECSGGDLDGDLYFISWDVDLVPPRTVTPMDYTGRRPRIMNHEVTLEEIQTF 2747
            +KGERPHPNECSGGDLDGD +FISWD DL+P +T  PMDYTGRRPRIM+HEVTLEEIQ F
Sbjct: 808  EKGERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKF 867

Query: 2748 FADYMISDTLGAISNAHLVHADREPEKALSPKCLELANLHSMAVDFAKTGAPAEMPRYLK 2927
            F DYMI+DTLGAIS AHLVHADREP KA S  CL LA LHSMAVDFAKTGAPAEMPR LK
Sbjct: 868  FVDYMINDTLGAISTAHLVHADREPYKARSENCLALATLHSMAVDFAKTGAPAEMPRALK 927

Query: 2928 PREFPDFMERWEKPTYVSHGALGKLYRATVQFIQKMKTNPDLPDEIPPNAFDPDLVVDGY 3107
            PREFPDFM+R  KP Y S G LGKLYRAT+    ++++      E+   A+D DL V+G+
Sbjct: 928  PREFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQIRSKFVWTKEMAELAYDHDLEVNGF 987

Query: 3108 ESFVAAAECHKEQYLDRMNALFSYYGAESEVEILTGNLHRKSAYLQYDNRRYGEVKERIL 3287
            ES ++ AE HKE Y +RM+ L SYY  E E EILTGN++ K+ +L  DNRRYGE+KERI+
Sbjct: 988  ESLISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNMYNKAQFLLRDNRRYGEMKERIV 1047

Query: 3288 VSVKSLMKEVKGWFRSSC 3341
            +SVK L +E K WF+SSC
Sbjct: 1048 LSVKDLQREAKEWFKSSC 1065


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score = 1298 bits (3360), Expect = 0.0
 Identities = 645/1094 (58%), Positives = 826/1094 (75%), Gaps = 1/1094 (0%)
 Frame = +3

Query: 63   TVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHGRVQFESPEAKIEA 242
            T++V+N+P  AIA+DL  FL S LG  +VFA+EIFTER+NWKSRG GRVQF + EAK +A
Sbjct: 8    TLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKA 67

Query: 243  LSLSHHRKLLFKGFYLSVTHSLEDIIIRPVDPIYRVGDGGGLVLFAGIMIRADCMGTLES 422
            +SLS    L+F    L  +   +DI++RPV    R  +G   VL  G M++ + M  LES
Sbjct: 68   MSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENG---VLHVGFMLKEERMSVLES 124

Query: 423  WNGMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGCCLGGGDMKVDAILLKLRHA 602
            W G+K W MPER++I F++ H  E YKLEV F ++LE+ G CLG  + K++A+LLKL++A
Sbjct: 125  WEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLG--EEKLNALLLKLKYA 182

Query: 603  PKIFKKVSGPKIASRFTTDRYHICKEDYDFIWVRTTDFSSMKSIGYLSSLCWEIEEGFSN 782
            P+I+KK+SG  +ASRF++ RY +C EDYD++WVRTT+FS M+S+G  +S CWE+EE    
Sbjct: 183  PRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQA 242

Query: 783  LDLYTSLPYYTKEVTELAFEE-VQFNHASDLVPIVKNDSVFQVAYEVLFQLNSLVHCQKL 959
             D+++  P+Y +   ++  E+  +F   S++VP++K+     +AYEV +QLNSLVH QK+
Sbjct: 243  SDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKI 302

Query: 960  SLAAVNTDLFQILSRLDMDTALLILKEMHKLHSTCXXXXXXXXXXXXXXXXXXXXXXXXX 1139
            SL+A N DL   L  LD+DTAL +L+ +H+L   C                         
Sbjct: 303  SLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLH------------- 349

Query: 1140 XXXXXXXXXXXXXXXXXXITTHNHKNLPSAYKRLIEHNIMSCHRVLVTPTKIFCLGPELE 1319
                              +   N K+LP + ++ + +N+M+C+RVLVTP++I+CLGPELE
Sbjct: 350  ------------------VYKRNCKSLPPSSQKRLSNNVMNCYRVLVTPSRIYCLGPELE 391

Query: 1320 SSNYIVKNFALDASDFMRVTFVDEDWGRLSPGAVSTSIMKGIFAKPYRTDIYRRILSVLQ 1499
            +SNY+VKNF+  ASDFMRVTFV+EDW +L  GAV+TSI +GI +KPYRT+IY RI++VL+
Sbjct: 392  TSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLR 451

Query: 1500 DGLVIGDKKFEFLAFSASQLRSNSVWMFASNDHVKAEDIREWMGCFNKIRSISKCAARMG 1679
            DG+VIG K+FEFLAFSASQLRSNSVWMFAS+D++KAE+IR+WMGCF KIRSISKCAARMG
Sbjct: 452  DGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMG 511

Query: 1680 QLFSSSMQTLQVIPRDVELIPEIEVVSDGVKHCFSDGIGKISIPFAREVVRKLGLSHIPS 1859
            QLFSSS QTL V  RDVE+IP+IEV +DG+ +CFSDGIGKIS+ FAR+V  K G++HIPS
Sbjct: 512  QLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPS 571

Query: 1860 AFQIRYGGYKGVIAVNRHSFRKLSLRSSMLKFESTNRMLNITKWSESQPCYLNREIITLL 2039
            AFQIRYGGYKGVIAV+R+SFRKLSLR SMLKFES N+MLN+TK  +S PCYLNREI TLL
Sbjct: 572  AFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLL 631

Query: 2040 STLGVKDSVFLAMQDEQLQLLGTMLTDAKAALNVLESTGGGDMKSSMARMLLQGYDPRNE 2219
            STLGVKD  F A+Q EQL LL  MLTD   ALNVLE+  G D  + + +ML  GY+P  E
Sbjct: 632  STLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIE 691

Query: 2220 PYLLTMLQSYLENQISDIRSRCRIFVPKGRVLVGCLDESGTLEYGQVFVRLTMNTAELEG 2399
            PYL  MLQ++  N  SD+RSRCRIFVPKGR+L+GCLDE+G L YGQV+  +T+  +EL+ 
Sbjct: 692  PYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQN 751

Query: 2400 GDQPFFQRVDETTSILRGKVVVTKNPCLHPGDVRVLEAVYDIKLQEDNMVDCLVFPQKGE 2579
             +Q +F  +DET SIL GKVVVTKNPCLHPGDVRVLEA++ ++L+E  +VDCL+FPQKG 
Sbjct: 752  RNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGA 811

Query: 2580 RPHPNECSGGDLDGDLYFISWDVDLVPPRTVTPMDYTGRRPRIMNHEVTLEEIQTFFADY 2759
            RPH NECSGGDLDGDLYFISWD +L+PP+T  PMDYTGRRPRIM+H+V LEEIQ FF DY
Sbjct: 812  RPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDY 871

Query: 2760 MISDTLGAISNAHLVHADREPEKALSPKCLELANLHSMAVDFAKTGAPAEMPRYLKPREF 2939
            MI+DTLGAIS AHLVHADREP+KALS KCLELA LHSMAVDFAKTGAPAEMPR LKPREF
Sbjct: 872  MINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREF 931

Query: 2940 PDFMERWEKPTYVSHGALGKLYRATVQFIQKMKTNPDLPDEIPPNAFDPDLVVDGYESFV 3119
            PDFMER++KP Y+S   LGKLYRA V+ I++ ++     +E     +D DL VDG+E+F+
Sbjct: 932  PDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFL 991

Query: 3120 AAAECHKEQYLDRMNALFSYYGAESEVEILTGNLHRKSAYLQYDNRRYGEVKERILVSVK 3299
              AE +KE Y+++M+ L +YYGAE E EIL G+L  +++YLQ DNR+YG++K+RIL+SVK
Sbjct: 992  EIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVK 1051

Query: 3300 SLMKEVKGWFRSSC 3341
            +L KEVK WF +SC
Sbjct: 1052 NLRKEVKEWFENSC 1065