BLASTX nr result
ID: Salvia21_contig00009056
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00009056
(1058 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus ... 450 e-124
ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vi... 442 e-122
gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana] 432 e-119
ref|NP_565463.1| large subunit ribosomal protein L4 [Arabidopsis... 431 e-118
emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera] 427 e-117
>ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus communis]
gi|223542267|gb|EEF43809.1| 50S ribosomal protein L4,
putative [Ricinus communis]
Length = 294
Score = 450 bits (1158), Expect = e-124
Identities = 234/307 (76%), Positives = 257/307 (83%)
Frame = +3
Query: 135 MALSISRRVLRAFAPGDVSSLPFSIYNAFRGHDCGDSLHSMRSSVLGKASLDVCRRYSTT 314
MA+SISRR+LR+F SLP + +FR H S + A+ CR+ ST+
Sbjct: 1 MAVSISRRILRSFR-----SLPSLTHQSFRAS------HESSSFIKNGAASLACRKLSTS 49
Query: 315 ILTPNSSEGTFPSHLLSSKTKSVLIPDREIGLCQDLVFPVTNFLNEDKGFMTLGGDVFDV 494
ILTP SS+ FPS LLS+KT +L P+REIGL +DLV PVTNFLNEDKGFM L GDVFDV
Sbjct: 50 ILTPGSSDDAFPSDLLSTKT--LLTPEREIGLHEDLVIPVTNFLNEDKGFMVLAGDVFDV 107
Query: 495 PIRKDIIHRVVRWQLAKRRQGTHSTKTISEVSGTGRKPWNQKGLGRARHGTLRGPQFRGG 674
PI+K IIHRVVRWQLAKR+QGTHSTKTISEVSGTG+KP+ QKG GRARHGTLRGPQFRGG
Sbjct: 108 PIKKHIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPYRQKGTGRARHGTLRGPQFRGG 167
Query: 675 AIMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLDVPTHKTKNIVNFVSQM 854
A MHGPKPRSHAIK NKKVRRLGLKIAL+ARAAEGKLLVFEDL++PTHKTKNIVN+V QM
Sbjct: 168 ATMHGPKPRSHAIKCNKKVRRLGLKIALTARAAEGKLLVFEDLEIPTHKTKNIVNYVKQM 227
Query: 855 ENAKKILLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNRIVER 1034
E KK+LLVDGGPINEKLKLA QNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNRIVER
Sbjct: 228 EETKKLLLVDGGPINEKLKLAAQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNRIVER 287
Query: 1035 MRTPINR 1055
M TPINR
Sbjct: 288 MHTPINR 294
>ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vitis vinifera]
gi|297741766|emb|CBI32995.3| unnamed protein product
[Vitis vinifera]
Length = 315
Score = 442 bits (1137), Expect = e-122
Identities = 240/317 (75%), Positives = 256/317 (80%), Gaps = 10/317 (3%)
Frame = +3
Query: 135 MALSISRRVLRAFAPGDV---SSLPFSIYNAFRGHD--CG----DSLHSMRSSVLGKASL 287
MA+SISRR+LR F P V + P + FR D CG D L S SS +S
Sbjct: 1 MAVSISRRLLRTFGPSRVFGHCNSPMIMCPLFRTSDALCGLVSQDGLFSTDSSCKTGSSF 60
Query: 288 DVCRRYSTT-ILTPNSSEGTFPSHLLSSKTKSVLIPDREIGLCQDLVFPVTNFLNEDKGF 464
R STT ILTP SS FP LLS+KT VL P+R G QDLV PVTNF NEDKGF
Sbjct: 61 LSSRSLSTTTILTPESSGVAFPPELLSTKT--VLTPERTPGHYQDLVIPVTNFHNEDKGF 118
Query: 465 MTLGGDVFDVPIRKDIIHRVVRWQLAKRRQGTHSTKTISEVSGTGRKPWNQKGLGRARHG 644
M L GDVFDVPIRKDI+HRVVRWQLAKR+QGTHSTKTISEVSGTGRKPW QKG GRARHG
Sbjct: 119 MVLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHG 178
Query: 645 TLRGPQFRGGAIMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLDVPTHKT 824
TLRGPQFRGGAIMHGPKPRSHAIKLNKKVRRLGLKIALSAR AEGKLLVF+DL+VP+HKT
Sbjct: 179 TLRGPQFRGGAIMHGPKPRSHAIKLNKKVRRLGLKIALSARTAEGKLLVFDDLEVPSHKT 238
Query: 825 KNIVNFVSQMENAKKILLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMS 1004
KNIVN+V +MEN KK+LLVDGGPI EKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMS
Sbjct: 239 KNIVNYVKEMENTKKLLLVDGGPITEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMS 298
Query: 1005 RDAVNRIVERMRTPINR 1055
RDAVN+IVERM TPINR
Sbjct: 299 RDAVNKIVERMHTPINR 315
>gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
Length = 300
Score = 432 bits (1110), Expect = e-119
Identities = 224/307 (72%), Positives = 254/307 (82%)
Frame = +3
Query: 135 MALSISRRVLRAFAPGDVSSLPFSIYNAFRGHDCGDSLHSMRSSVLGKASLDVCRRYSTT 314
MA SISRR+ R F G S+L S + G+ L S+ + + +L R+ ST+
Sbjct: 1 MAASISRRIFRTF--GSFSALGRSSSPNLSANTSGNGLASLTNDLKYGMALLSNRKLSTS 58
Query: 315 ILTPNSSEGTFPSHLLSSKTKSVLIPDREIGLCQDLVFPVTNFLNEDKGFMTLGGDVFDV 494
ILTP+ S FPS LL+ KT VL PDR IG QDLV PVTNF NE+KGFM L GDVFDV
Sbjct: 59 ILTPDDS---FPSDLLTKKT--VLTPDRTIGQYQDLVIPVTNFQNEEKGFMVLAGDVFDV 113
Query: 495 PIRKDIIHRVVRWQLAKRRQGTHSTKTISEVSGTGRKPWNQKGLGRARHGTLRGPQFRGG 674
PIRKDIIH VVRWQLAKR+QGTHSTKT+SEVSGTGRKPWNQKG GRARHGTLRGPQFRGG
Sbjct: 114 PIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLRGPQFRGG 173
Query: 675 AIMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLDVPTHKTKNIVNFVSQM 854
+MHGPKPRSHAIK+NK+VRRLGLKIAL+ARAAEGKLLVF+DL +PTHKTKNIVN+ +QM
Sbjct: 174 CVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGLPTHKTKNIVNYYNQM 233
Query: 855 ENAKKILLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNRIVER 1034
EN KK+L+V+GGPI+EKLKLATQNLHYVN++PSIGLNVYSILLHDTLVMSRDAVN+IVER
Sbjct: 234 ENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLVMSRDAVNKIVER 293
Query: 1035 MRTPINR 1055
M TPINR
Sbjct: 294 MHTPINR 300
>ref|NP_565463.1| large subunit ribosomal protein L4 [Arabidopsis thaliana]
gi|18252969|gb|AAL62411.1| 50S ribosomal protein L4
[Arabidopsis thaliana] gi|20197568|gb|AAD24390.2| 50S
ribosomal protein L4 [Arabidopsis thaliana]
gi|25084070|gb|AAN72167.1| 50S ribosomal protein L4
[Arabidopsis thaliana] gi|330251866|gb|AEC06960.1| large
subunit ribosomal protein L4 [Arabidopsis thaliana]
Length = 300
Score = 431 bits (1107), Expect = e-118
Identities = 223/307 (72%), Positives = 254/307 (82%)
Frame = +3
Query: 135 MALSISRRVLRAFAPGDVSSLPFSIYNAFRGHDCGDSLHSMRSSVLGKASLDVCRRYSTT 314
MA SISRR+ R F G S+L S + G+ L S+ + + +L R+ ST+
Sbjct: 1 MAASISRRIFRTF--GSFSALGRSSSPNLSANTSGNGLASLTNDLKYGMALLSNRKLSTS 58
Query: 315 ILTPNSSEGTFPSHLLSSKTKSVLIPDREIGLCQDLVFPVTNFLNEDKGFMTLGGDVFDV 494
ILTP+ S FPS LL+ KT VL PDR IG QDLV PVTNF NE+KGFM L GDVFDV
Sbjct: 59 ILTPDDS---FPSDLLTKKT--VLTPDRTIGQYQDLVIPVTNFQNEEKGFMVLAGDVFDV 113
Query: 495 PIRKDIIHRVVRWQLAKRRQGTHSTKTISEVSGTGRKPWNQKGLGRARHGTLRGPQFRGG 674
PIRKDIIH VVRWQLAKR+QGTHSTKT+SEVSGTGRKPWNQKG GRARHGTLRGPQFRGG
Sbjct: 114 PIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLRGPQFRGG 173
Query: 675 AIMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLDVPTHKTKNIVNFVSQM 854
+MHGPKPRSHAIK+NK+VRRLGLKIAL+ARAAEGKLLVF+DL +PTHKTKNIVN+ +QM
Sbjct: 174 CVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGLPTHKTKNIVNYYNQM 233
Query: 855 ENAKKILLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNRIVER 1034
EN KK+L+V+GGPI+EKLKLATQNLHYVN++PSIGLNVYSILLHDTL+MSRDAVN+IVER
Sbjct: 234 ENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLLMSRDAVNKIVER 293
Query: 1035 MRTPINR 1055
M TPINR
Sbjct: 294 MHTPINR 300
>emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]
Length = 278
Score = 427 bits (1099), Expect = e-117
Identities = 226/307 (73%), Positives = 245/307 (79%)
Frame = +3
Query: 135 MALSISRRVLRAFAPGDVSSLPFSIYNAFRGHDCGDSLHSMRSSVLGKASLDVCRRYSTT 314
MA+SISRR+L F P ++ SS L SL +TT
Sbjct: 1 MAVSISRRLLXTFGPSRLTG----------------------SSFLSSRSLS-----TTT 33
Query: 315 ILTPNSSEGTFPSHLLSSKTKSVLIPDREIGLCQDLVFPVTNFLNEDKGFMTLGGDVFDV 494
+LTP SS FP LLS+KT VL P+R G QDLV PVTNF NEDKGFM L GDVFDV
Sbjct: 34 MLTPESSGVAFPPELLSTKT--VLTPERTPGHYQDLVIPVTNFHNEDKGFMXLAGDVFDV 91
Query: 495 PIRKDIIHRVVRWQLAKRRQGTHSTKTISEVSGTGRKPWNQKGLGRARHGTLRGPQFRGG 674
PIRKDI+HRVVRWQLAKR+QGTHSTKTISEVSGTG+KPW QKG GRARHGTLRGPQFRGG
Sbjct: 92 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGG 151
Query: 675 AIMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLLVFEDLDVPTHKTKNIVNFVSQM 854
AIMHGPKPRSHAIKLNKKVRRLGLKIALSAR AEGKLLVF+DL+VP+HKTKNIVN+V +M
Sbjct: 152 AIMHGPKPRSHAIKLNKKVRRLGLKIALSARTAEGKLLVFDDLEVPSHKTKNIVNYVKEM 211
Query: 855 ENAKKILLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNRIVER 1034
EN KK+LLVDGGPI EKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSR+AVN+IVER
Sbjct: 212 ENXKKLLLVDGGPITEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRBAVNKIVER 271
Query: 1035 MRTPINR 1055
M TPINR
Sbjct: 272 MHTPINR 278