BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00008700
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   318   1e-84
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   313   6e-83
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    306   6e-81
ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana] gi|122...   305   2e-80
ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80

>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
            vinifera]
          Length = 288

 Score =  318 bits (816), Expect = 1e-84
 Identities = 172/277 (62%), Positives = 209/277 (75%), Gaps = 19/277 (6%)
 Frame = -1

Query: 1199 PQTLSFVAASSMA----PSSLKPLAMPRHFLSLSTIG-SYSHPASKFVRNVAISSXXXXX 1035
            P+TL+    +S++    P S   L +  + +SLS     +   +S+FVRNVA+SS     
Sbjct: 15   PKTLAISKPTSVSFFSLPFSCSSLKLHSNSISLSPSSRGFLTLSSRFVRNVAVSSDYEQD 74

Query: 1034 XXXXXXEGTSPQPNFSPELKLFVGNLPFNVDSSRLAGLFEQAGNVEMVEVIYDKTTGRSR 855
                  EG   +P+FSP+LKLFVGNLPFNVDS+ LAGLFEQAGNVEMVEVIYDK TGRSR
Sbjct: 75   EDVLSDEG---EPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSR 131

Query: 854  GFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSGPPPP--------------KDENFSS 717
            GFGFVTMSTVEEVEAAAQQFNGYE  GR LRV+SGPPP               + EN + 
Sbjct: 132  GFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNF 191

Query: 716  RGPRGGSSIDNTNRLYVGNLAWGVDNLTLETLFSEQGKVKEATVVYDRDSGRSRGFGFVT 537
            RGPRGG+++++TNR+YVGNL+WGVD+L LETLFSEQGKV EA V+YDR++GRSRGFGFVT
Sbjct: 192  RGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVT 251

Query: 536  YGSAQEVDNAIRSLDGMDLNGRSIRVSRAEARPKREY 426
            Y SA+EV+ AI SLDG+DLNGRSIRV+ AEARP+R++
Sbjct: 252  YNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
            Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
            29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  313 bits (802), Expect = 6e-83
 Identities = 169/257 (65%), Positives = 194/257 (75%), Gaps = 1/257 (0%)
 Frame = -1

Query: 1199 PQTLSFVAASSMAPSSLKPLAMPRHFLSLSTIGSYSHPASKFVRNVAISSXXXXXXXXXX 1020
            PQTL     +S   +SL   ++P   L+LS   S S  +S+FVR V +S           
Sbjct: 15   PQTLPLPKPTSQT-TSLSFFSLPPSSLNLSLSSSSSCFSSRFVRKVTLSDFDQIEDVEDG 73

Query: 1019 XEGTSPQPNFSPELKLFVGNLPFNVDSSRLAGLFEQAGNVEMVEVIYDKTTGRSRGFGFV 840
             +G   + NFSP+LK+FVGNLPF+ DS+ LA LFE+AGNVEMVEVIYDK TGRSRGFGFV
Sbjct: 74   DDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFV 133

Query: 839  TMSTVEEVEAAAQQFNGYEFHGRALRVSSGPPPPKDENFSSR-GPRGGSSIDNTNRLYVG 663
            TMS+ EEVEAA QQFNGYE  GRALRV+SGPPP K EN S R G RGG S D++NR+YVG
Sbjct: 134  TMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVG 193

Query: 662  NLAWGVDNLTLETLFSEQGKVKEATVVYDRDSGRSRGFGFVTYGSAQEVDNAIRSLDGMD 483
            NLAWGVD   LETLFSEQGKV +A VVYDRDSGRSRGFGFVTY SA+EV+NAI SLDG+D
Sbjct: 194  NLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVD 253

Query: 482  LNGRSIRVSRAEARPKR 432
            LNGR+IRVS AEARP R
Sbjct: 254  LNGRAIRVSPAEARPPR 270



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 39/91 (42%), Positives = 55/91 (60%)
 Frame = -1

Query: 995 NFSPELKLFVGNLPFNVDSSRLAGLFEQAGNVEMVEVIYDKTTGRSRGFGFVTMSTVEEV 816
           +F    +++VGNL + VD   L  LF + G V   +V+YD+ +GRSRGFGFVT S+ EEV
Sbjct: 183 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 242

Query: 815 EAAAQQFNGYEFHGRALRVSSGPPPPKDENF 723
             A +  +G + +GRA+RVS     P    F
Sbjct: 243 NNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 36/83 (43%), Positives = 54/83 (65%)
 Frame = -1

Query: 677 RLYVGNLAWGVDNLTLETLFSEQGKVKEATVVYDRDSGRSRGFGFVTYGSAQEVDNAIRS 498
           +++VGNL +  D+  L  LF   G V+   V+YD+ +GRSRGFGFVT  S +EV+ A + 
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 497 LDGMDLNGRSIRVSRAEARPKRE 429
            +G +L+GR++RV+      KRE
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRE 170


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  306 bits (785), Expect = 6e-81
 Identities = 165/274 (60%), Positives = 195/274 (71%), Gaps = 16/274 (5%)
 Frame = -1

Query: 1205 FAPQTLSFVAASSMAPSSLKP---LAMPRHFLSLSTIGSYSHPASKFVRNVAISSXXXXX 1035
            F P++L F  +   + S L P     +    +S S    ++ PAS+FVRNVAI+S     
Sbjct: 13   FNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFVRNVAITSEFEVE 72

Query: 1034 XXXXXXEGTSPQPNFSPELKLFVGNLPFNVDSSRLAGLFEQAGNVEMVEVIYDKTTGRSR 855
                       + +FS +LKLFVGNLPFNVDS++LA LFE AGNVEMVEVIYDK TGRSR
Sbjct: 73   EDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSR 132

Query: 854  GFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSGPPPPKDENFSSRGPR---------- 705
            GFGFVTMS+V EVEAAAQQFNGYE  GR LRV++GPPPPK E+  SRGPR          
Sbjct: 133  GFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGY 192

Query: 704  ---GGSSIDNTNRLYVGNLAWGVDNLTLETLFSEQGKVKEATVVYDRDSGRSRGFGFVTY 534
               GGS   + NR+YVGNL+WGVD++ LE+LFSEQGKV EA V+YDRDSGRS+GFGFVTY
Sbjct: 193  GGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTY 252

Query: 533  GSAQEVDNAIRSLDGMDLNGRSIRVSRAEARPKR 432
             S+QEV NAI+SLDG DL+GR IRVS AEARP R
Sbjct: 253  DSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 44/105 (41%), Positives = 63/105 (60%)
 Frame = -1

Query: 743 PPKDENFSSRGPRGGSSIDNTNRLYVGNLAWGVDNLTLETLFSEQGKVKEATVVYDRDSG 564
           PPK+++FS+             +L+VGNL + VD+  L  LF   G V+   V+YD+ +G
Sbjct: 81  PPKEQSFSA-----------DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITG 129

Query: 563 RSRGFGFVTYGSAQEVDNAIRSLDGMDLNGRSIRVSRAEARPKRE 429
           RSRGFGFVT  S  EV+ A +  +G +L+GR +RV+     PKRE
Sbjct: 130 RSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 174


>ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
            gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
            Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
            Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
            RNA-binding protein [Arabidopsis thaliana]
            gi|4056477|gb|AAC98043.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
            At2g37220/F3G5.1 [Arabidopsis thaliana]
            gi|16323482|gb|AAL15235.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
            putative RNA-binding protein [Arabidopsis thaliana]
            gi|330254275|gb|AEC09369.1| ribonucleoprotein
            [Arabidopsis thaliana]
          Length = 289

 Score =  305 bits (781), Expect = 2e-80
 Identities = 164/274 (59%), Positives = 194/274 (70%), Gaps = 16/274 (5%)
 Frame = -1

Query: 1205 FAPQTLSFVAASSMAPSSLKP---LAMPRHFLSLSTIGSYSHPASKFVRNVAISSXXXXX 1035
            F P++L F  +   + S L P     +    +S S    ++ PAS+F RNVAI+S     
Sbjct: 13   FNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVE 72

Query: 1034 XXXXXXEGTSPQPNFSPELKLFVGNLPFNVDSSRLAGLFEQAGNVEMVEVIYDKTTGRSR 855
                       + +FS +LKLFVGNLPFNVDS++LA LFE AGNVEMVEVIYDK TGRSR
Sbjct: 73   EDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSR 132

Query: 854  GFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSGPPPPKDENFSSRGPR---------- 705
            GFGFVTMS+V EVEAAAQQFNGYE  GR LRV++GPPPPK E+  SRGPR          
Sbjct: 133  GFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGY 192

Query: 704  ---GGSSIDNTNRLYVGNLAWGVDNLTLETLFSEQGKVKEATVVYDRDSGRSRGFGFVTY 534
               GGS   + NR+YVGNL+WGVD++ LE+LFSEQGKV EA V+YDRDSGRS+GFGFVTY
Sbjct: 193  GGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTY 252

Query: 533  GSAQEVDNAIRSLDGMDLNGRSIRVSRAEARPKR 432
             S+QEV NAI+SLDG DL+GR IRVS AEARP R
Sbjct: 253  DSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 44/105 (41%), Positives = 63/105 (60%)
 Frame = -1

Query: 743 PPKDENFSSRGPRGGSSIDNTNRLYVGNLAWGVDNLTLETLFSEQGKVKEATVVYDRDSG 564
           PPK+++FS+             +L+VGNL + VD+  L  LF   G V+   V+YD+ +G
Sbjct: 81  PPKEQSFSA-----------DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITG 129

Query: 563 RSRGFGFVTYGSAQEVDNAIRSLDGMDLNGRSIRVSRAEARPKRE 429
           RSRGFGFVT  S  EV+ A +  +G +L+GR +RV+     PKRE
Sbjct: 130 RSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 174


>ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|222868100|gb|EEF05231.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  305 bits (780), Expect = 2e-80
 Identities = 163/258 (63%), Positives = 199/258 (77%)
 Frame = -1

Query: 1199 PQTLSFVAASSMAPSSLKPLAMPRHFLSLSTIGSYSHPASKFVRNVAISSXXXXXXXXXX 1020
            P +L F++ SS   SSLKP++     L LS        +S+F++NVAISS          
Sbjct: 27   PNSLFFLSPSST--SSLKPVS-----LLLSFQHQQQPLSSRFLKNVAISSEFGQEEDFL- 78

Query: 1019 XEGTSPQPNFSPELKLFVGNLPFNVDSSRLAGLFEQAGNVEMVEVIYDKTTGRSRGFGFV 840
                  + +FS +LKLFVGNLPFNVDS+RLAGLFE AGNVEMVEVIYDK TGRSRGFGFV
Sbjct: 79   --SDGDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFV 136

Query: 839  TMSTVEEVEAAAQQFNGYEFHGRALRVSSGPPPPKDENFSSRGPRGGSSIDNTNRLYVGN 660
            TM+T+EEVEAA++QFNGYE  GR LRV+ GPPP K+ +FS RGPRGG + D+ NR+YVGN
Sbjct: 137  TMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFS-RGPRGGETFDSGNRVYVGN 195

Query: 659  LAWGVDNLTLETLFSEQGKVKEATVVYDRDSGRSRGFGFVTYGSAQEVDNAIRSLDGMDL 480
            L+W VDNL LETLF E+G+V +A VVYDRDSGRSRGFGFVTY SA+EVDNAI SL+G +L
Sbjct: 196  LSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAEL 255

Query: 479  NGRSIRVSRAEARPKREY 426
            +GR+IRVS AEA+P+R++
Sbjct: 256  DGRAIRVSVAEAKPRRQF 273