BLASTX nr result

ID: Salvia21_contig00008637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00008637
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20115.3| unnamed protein product [Vitis vinifera]              335   1e-89
ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloro...   335   1e-89
ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana...   322   9e-86
ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata] g...   321   2e-85
gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides]      313   4e-83

>emb|CBI20115.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  335 bits (859), Expect = 1e-89
 Identities = 162/208 (77%), Positives = 186/208 (89%), Gaps = 3/208 (1%)
 Frame = +3

Query: 255 RTTPFLGFSL-AASTKPSVQSNRLFKICCQDKAATIPAEQQWMFD--DLTGPDVWNKTWY 425
           +TTPFLGFS+ AA+ KPS    + F++ CQDKAA +P +Q+WMF+  +++GPD+WNKTWY
Sbjct: 167 KTTPFLGFSISAANPKPSFP-RQSFRVNCQDKAAVVPLDQRWMFEQSEVSGPDIWNKTWY 225

Query: 426 PKATDHIPTSKTWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAHVIVVNAEKV 605
           PKA DHI T KTWY+VDA+DKILGRLASTIAI+IRGKNLATYTPSVDMG+ VIVVNAEKV
Sbjct: 226 PKAADHINTEKTWYIVDATDKILGRLASTIAIYIRGKNLATYTPSVDMGSFVIVVNAEKV 285

Query: 606 AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHL 785
           AVSGKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERI+EHAVRGMLPKGRLGR+LF HL
Sbjct: 286 AVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHL 345

Query: 786 KVYTGPDHPHEAQQPKELPIRDKRITKQ 869
           KVY GP HPHEAQ+P +LPIRDKRI K+
Sbjct: 346 KVYKGPHHPHEAQKPIDLPIRDKRIQKE 373


>ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Vitis
           vinifera]
          Length = 235

 Score =  335 bits (859), Expect = 1e-89
 Identities = 162/208 (77%), Positives = 186/208 (89%), Gaps = 3/208 (1%)
 Frame = +3

Query: 255 RTTPFLGFSL-AASTKPSVQSNRLFKICCQDKAATIPAEQQWMFD--DLTGPDVWNKTWY 425
           +TTPFLGFS+ AA+ KPS    + F++ CQDKAA +P +Q+WMF+  +++GPD+WNKTWY
Sbjct: 28  KTTPFLGFSISAANPKPSFP-RQSFRVNCQDKAAVVPLDQRWMFEQSEVSGPDIWNKTWY 86

Query: 426 PKATDHIPTSKTWYVVDASDKILGRLASTIAIHIRGKNLATYTPSVDMGAHVIVVNAEKV 605
           PKA DHI T KTWY+VDA+DKILGRLASTIAI+IRGKNLATYTPSVDMG+ VIVVNAEKV
Sbjct: 87  PKAADHINTEKTWYIVDATDKILGRLASTIAIYIRGKNLATYTPSVDMGSFVIVVNAEKV 146

Query: 606 AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHL 785
           AVSGKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERI+EHAVRGMLPKGRLGR+LF HL
Sbjct: 147 AVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHL 206

Query: 786 KVYTGPDHPHEAQQPKELPIRDKRITKQ 869
           KVY GP HPHEAQ+P +LPIRDKRI K+
Sbjct: 207 KVYKGPHHPHEAQKPIDLPIRDKRIQKE 234


>ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana]
           gi|75314103|sp|Q9SYL9.1|RK13_ARATH RecName: Full=50S
           ribosomal protein L13, chloroplastic; AltName:
           Full=CL13; AltName: Full=Protein EMBRYO DEFECTIVE 1473;
           Flags: Precursor gi|4836870|gb|AAD30573.1|AC007260_4 50S
           Ribosomal protein L13 [Arabidopsis thaliana]
           gi|13878111|gb|AAK44133.1|AF370318_1 putative ribosomal
           protein L13 [Arabidopsis thaliana]
           gi|7572938|emb|CAA60775.1| ribosomal protein L13
           [Arabidopsis thaliana] gi|17104781|gb|AAL34279.1|
           putative ribosomal protein L13 [Arabidopsis thaliana]
           gi|332198009|gb|AEE36130.1| 50S ribosomal protein L13
           [Arabidopsis thaliana]
          Length = 241

 Score =  322 bits (826), Expect = 9e-86
 Identities = 167/242 (69%), Positives = 188/242 (77%), Gaps = 12/242 (4%)
 Frame = +3

Query: 180 MAVNCATSSSLFIXXXXXXXXXXXLRTTPFLGFSLAASTKPSVQ------SNRLFKICCQ 341
           MAV C  SSS  I            R +PFLGFSL A +KPSV+      S R  ++ C+
Sbjct: 1   MAVLC--SSSTVILSSSSVKSSGSERKSPFLGFSLTAISKPSVRVGIYANSKRGLQVKCE 58

Query: 342 DKAAT----IPAEQQWMFDD--LTGPDVWNKTWYPKATDHIPTSKTWYVVDASDKILGRL 503
            +  T    +PA Q+WMFD+    GPD+WN TWYPKA+DH+ T K W+VVDA+DKILGRL
Sbjct: 59  AEPTTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRL 118

Query: 504 ASTIAIHIRGKNLATYTPSVDMGAHVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVET 683
           ASTIA HIRGKNLA+YTPSVDMGA VIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVET
Sbjct: 119 ASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVET 178

Query: 684 FDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQQPKELPIRDKRIT 863
           FDQLQ+RIPERI+EHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQ+P +LPIRDKRI 
Sbjct: 179 FDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRIQ 238

Query: 864 KQ 869
            Q
Sbjct: 239 LQ 240


>ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata]
           gi|297333589|gb|EFH64007.1| EMB1473 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 242

 Score =  321 bits (822), Expect = 2e-85
 Identities = 166/243 (68%), Positives = 187/243 (76%), Gaps = 13/243 (5%)
 Frame = +3

Query: 180 MAVNCATSSSLFIXXXXXXXXXXXLRTTPFLGFSLAASTKPSVQ------SNRLFKICCQ 341
           M V C  SSS  I            R +PFLGFSL A +KPSV+      S R  ++ C+
Sbjct: 1   MTVLC--SSSTVILPSSSVKPSGSERKSPFLGFSLTAFSKPSVRVGIYANSKRGLQVKCE 58

Query: 342 -----DKAATIPAEQQWMFDD--LTGPDVWNKTWYPKATDHIPTSKTWYVVDASDKILGR 500
                 K + +PA Q+WMFD+    GPD+WN TWYPKA+DH+ T K W+VVDA+DKILGR
Sbjct: 59  AEETTTKTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGR 118

Query: 501 LASTIAIHIRGKNLATYTPSVDMGAHVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVE 680
           LASTIA HIRGKNLA+YTPSVDMGA VIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVE
Sbjct: 119 LASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVE 178

Query: 681 TFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQQPKELPIRDKRI 860
           TFDQLQ+RIPERI+EHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQ+P +LPIRDKRI
Sbjct: 179 TFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRI 238

Query: 861 TKQ 869
             Q
Sbjct: 239 QLQ 241


>gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 241

 Score =  313 bits (803), Expect = 4e-83
 Identities = 162/237 (68%), Positives = 185/237 (78%), Gaps = 10/237 (4%)
 Frame = +3

Query: 180 MAVNCATSS---SLFIXXXXXXXXXXXLRTTPFL-GFSLAASTKPSVQSNRLFKICCQDK 347
           MA+ CA+SS   S              +  +PF+ GFS + S      S R F++ C+ K
Sbjct: 1   MAMLCASSSFTTSTKPSSSYSTKNGTSISPSPFVVGFSFSQSWFSLSNSRRGFEVRCEKK 60

Query: 348 ----AATIPAEQQWMFDD--LTGPDVWNKTWYPKATDHIPTSKTWYVVDASDKILGRLAS 509
                  +P +Q+W+F++  + GPD+WN TWYPKA DHI T KTWY+VDA+DKILGRLAS
Sbjct: 61  DKSVVTRVPLDQRWLFEESEINGPDIWNTTWYPKAADHINTEKTWYIVDATDKILGRLAS 120

Query: 510 TIAIHIRGKNLATYTPSVDMGAHVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFD 689
           TIAI+IRGKNLATYTPSVDMGA VIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFD
Sbjct: 121 TIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFD 180

Query: 690 QLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQQPKELPIRDKRI 860
           QLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVYTGP HPHEAQ+P ELPIRDKRI
Sbjct: 181 QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYTGPTHPHEAQKPIELPIRDKRI 237


Top