BLASTX nr result

ID: Salvia21_contig00008474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00008474
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282394.1| PREDICTED: uncharacterized protein LOC100264...   154   4e-38
emb|CCH47177.1| similar to signal recognition particle 54 kDa pr...   142   6e-35
ref|NP_567560.2| Nucleic acid-binding, OB-fold-like protein [Ara...   144   6e-35
gb|AFK38432.1| unknown [Lotus japonicus]                              142   8e-35
ref|XP_002870036.1| hypothetical protein ARALYDRAFT_329677 [Arab...   141   4e-34

>ref|XP_002282394.1| PREDICTED: uncharacterized protein LOC100264936 [Vitis vinifera]
           gi|297740124|emb|CBI30306.3| unnamed protein product
           [Vitis vinifera]
          Length = 107

 Score =  154 bits (389), Expect(2) = 4e-38
 Identities = 76/99 (76%), Positives = 89/99 (89%), Gaps = 1/99 (1%)
 Frame = +1

Query: 46  MDTSNPAVFVNAELLRMHIGKRVRAVIQVLRNDGGSIIGKSTDEQQLVVKGHPSS-PPTT 222
           MDTSNPAVFVN ELLRM++G++VRAVIQV+R++GG IIGKSTDEQQLV+KG P S P TT
Sbjct: 1   MDTSNPAVFVNMELLRMYVGRKVRAVIQVIRSEGGVIIGKSTDEQQLVIKGTPPSFPLTT 60

Query: 223 FLEVIGIADTNQSIQAEIWTNFGDDFDISSYNAVCQLAN 339
           F+EVIGIAD+NQSI+AEIWTNFGD FD  +YN +CQLAN
Sbjct: 61  FVEVIGIADSNQSIRAEIWTNFGDTFDTYAYNQLCQLAN 99



 Score = 29.6 bits (65), Expect(2) = 4e-38
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 396 VCQLANGDFKHLFI 437
           +CQLANG++KHLF+
Sbjct: 94  LCQLANGEYKHLFL 107


>emb|CCH47177.1| similar to signal recognition particle 54 kDa protein [Lupinus
           angustifolius]
          Length = 731

 Score =  142 bits (358), Expect(2) = 6e-35
 Identities = 69/101 (68%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
 Frame = +1

Query: 40  KKMDTSNPAVFVNAELLRMHIGKRVRAVIQVLRNDGGSIIGKSTDEQQLVVKGHPSSPP- 216
           + MDTSNPAVFVNAELL  ++G+RVRAV+QV+R+DGG++IGKSTDE+QLVVKG P S P 
Sbjct: 623 QNMDTSNPAVFVNAELLHFYVGRRVRAVMQVIRSDGGAVIGKSTDEKQLVVKGSPPSVPF 682

Query: 217 TTFLEVIGIADTNQSIQAEIWTNFGDDFDISSYNAVCQLAN 339
           T F+EVIGI D  + I+AE WTNFGD  D+ SYN +CQLAN
Sbjct: 683 TNFVEVIGIVDNEKCIRAETWTNFGDAIDMFSYNKLCQLAN 723



 Score = 30.8 bits (68), Expect(2) = 6e-35
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = +3

Query: 396 VCQLANGDFKHLFI 437
           +CQLANG+FKHLF+
Sbjct: 718 LCQLANGEFKHLFL 731


>ref|NP_567560.2| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
           gi|45773776|gb|AAS76692.1| At4g18590 [Arabidopsis
           thaliana] gi|46359785|gb|AAS88756.1| At4g18590
           [Arabidopsis thaliana] gi|332658664|gb|AEE84064.1|
           Nucleic acid-binding, OB-fold-like protein [Arabidopsis
           thaliana]
          Length = 106

 Score =  144 bits (363), Expect(2) = 6e-35
 Identities = 66/98 (67%), Positives = 85/98 (86%)
 Frame = +1

Query: 46  MDTSNPAVFVNAELLRMHIGKRVRAVIQVLRNDGGSIIGKSTDEQQLVVKGHPSSPPTTF 225
           MDTS+PA FVN  LLR +IG++VRAVIQV+R+D GS+IGKSTD+QQ+VVKG P  P TT+
Sbjct: 1   MDTSSPAAFVNGALLRRYIGQKVRAVIQVIRSDVGSVIGKSTDDQQIVVKGSPQPPLTTY 60

Query: 226 LEVIGIADTNQSIQAEIWTNFGDDFDISSYNAVCQLAN 339
           LEVIGIA+T+ +I+AE+WTNFGD FD+ +YN +C+LAN
Sbjct: 61  LEVIGIAETDNTIRAEVWTNFGDSFDVQNYNELCKLAN 98



 Score = 28.9 bits (63), Expect(2) = 6e-35
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 396 VCQLANGDFKHLFI 437
           +C+LANG+F+HLFI
Sbjct: 93  LCKLANGEFRHLFI 106


>gb|AFK38432.1| unknown [Lotus japonicus]
          Length = 107

 Score =  142 bits (357), Expect(2) = 8e-35
 Identities = 68/99 (68%), Positives = 86/99 (86%), Gaps = 1/99 (1%)
 Frame = +1

Query: 46  MDTSNPAVFVNAELLRMHIGKRVRAVIQVLRNDGGSIIGKSTDEQQLVVKGH-PSSPPTT 222
           MDTSNPAVFVNAELL+ H+G+RVRAV+QV+R+DG  +IGKSTD++QLVVKG  P +P TT
Sbjct: 1   MDTSNPAVFVNAELLQFHVGRRVRAVMQVVRSDGAVVIGKSTDDKQLVVKGSPPPAPLTT 60

Query: 223 FLEVIGIADTNQSIQAEIWTNFGDDFDISSYNAVCQLAN 339
           F+EVIGI D+++SI+AE+WTNFGD  D+ SY  +CQLAN
Sbjct: 61  FVEVIGIVDSDKSIRAEMWTNFGDSIDMVSYQKLCQLAN 99



 Score = 30.8 bits (68), Expect(2) = 8e-35
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = +3

Query: 396 VCQLANGDFKHLFI 437
           +CQLANG+FKHLF+
Sbjct: 94  LCQLANGEFKHLFL 107


>ref|XP_002870036.1| hypothetical protein ARALYDRAFT_329677 [Arabidopsis lyrata subsp.
           lyrata] gi|297315872|gb|EFH46295.1| hypothetical protein
           ARALYDRAFT_329677 [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score =  141 bits (356), Expect(2) = 4e-34
 Identities = 65/98 (66%), Positives = 84/98 (85%)
 Frame = +1

Query: 46  MDTSNPAVFVNAELLRMHIGKRVRAVIQVLRNDGGSIIGKSTDEQQLVVKGHPSSPPTTF 225
           MDTS+PA FVN  LLR +IG++VRAVIQV+R+D GS+IGKSTD+QQ+VVKG P+ P TT+
Sbjct: 1   MDTSSPAAFVNGALLRRYIGQKVRAVIQVIRSDIGSVIGKSTDDQQIVVKGSPNPPLTTY 60

Query: 226 LEVIGIADTNQSIQAEIWTNFGDDFDISSYNAVCQLAN 339
           +EVIGIA+T  +I+AE+WTNFGD FD  +YN +C+LAN
Sbjct: 61  IEVIGIAETENTIRAEVWTNFGDSFDAQNYNELCKLAN 98



 Score = 28.9 bits (63), Expect(2) = 4e-34
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 396 VCQLANGDFKHLFI 437
           +C+LANG+F+HLFI
Sbjct: 93  LCKLANGEFRHLFI 106


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