BLASTX nr result

ID: Salvia21_contig00008246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00008246
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   199   8e-49
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   189   6e-46
ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   189   1e-45
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45
ref|XP_003611125.1| General transcription factor IIE subunit [Me...   181   2e-43

>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  199 bits (506), Expect = 8e-49
 Identities = 102/169 (60%), Positives = 125/169 (73%)
 Frame = +1

Query: 1   KSQATLGNTAAKAGNPKATFSRSMPSSMXXXXXXXXXXXXXXXXENTEHLQEINSIRKAP 180
           K Q+TL + AAKAG+ K T    +P                    +TE LQ INSIRKAP
Sbjct: 16  KCQSTLTSIAAKAGSSKPT----VPQKFTPAAPTKPPTPAVKFSNDTERLQHINSIRKAP 71

Query: 181 VGAQIKRVINLLFKTREALTPDQINKACYVDANGNKAVFDSLRNNPKVRYDGERFSYKSK 360
           VGAQIKRVI+LL +TR+A TP+QIN+ACYVD N NKAVFDSLRNNPKV YDG+RF+YKSK
Sbjct: 72  VGAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSYDGKRFAYKSK 131

Query: 361 HQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQTLKGSGEIWLLS 507
           H L++++ LL L+R  PEGIAVIDLKDSY +V++DLQ LK +G++WLLS
Sbjct: 132 HDLKDRSQLLVLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQVWLLS 180



 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 45/71 (63%), Positives = 50/71 (70%)
 Frame = +3

Query: 687 RGIELPRDMLDIERDLQKNGMKPATNTAKRRAAAEIHGMPQXXXXXXXXXXXXXXXXLTN 866
           R IELPRDMLDIE+DLQKNGMKPATNTAKRRA A++HG+                  LTN
Sbjct: 209 RTIELPRDMLDIEKDLQKNGMKPATNTAKRRAMAQVHGIASKSKPKKKKHEISKRTKLTN 268

Query: 867 AHLPELFQTLR 899
           AHLPELFQ L+
Sbjct: 269 AHLPELFQNLK 279


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score =  189 bits (481), Expect = 6e-46
 Identities = 103/171 (60%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = +1

Query: 1   KSQATLGNTAAKAGNPKATFSRSM--PSSMXXXXXXXXXXXXXXXXENTEHLQEINSIRK 174
           K Q TL + AAKAG+ K + +  +  PS +                 +TE LQ I+SIRK
Sbjct: 16  KCQTTLTSIAAKAGSHKPSITPKIVAPSPIIPRTPGPAVKFS----NDTERLQHIHSIRK 71

Query: 175 APVGAQIKRVINLLFKTREALTPDQINKACYVDANGNKAVFDSLRNNPKVRYDGERFSYK 354
           APVGAQIKRVI+LLF+TR+A TP+QIN+ACYVD N NKAVFDSLRNNPKV YDG  FSYK
Sbjct: 72  APVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRHFSYK 131

Query: 355 SKHQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQTLKGSGEIWLLS 507
           SKH L++K  LL LIR   EGIAVIDLKD+Y  V++DLQ LK +G IWLLS
Sbjct: 132 SKHDLKDKKQLLYLIREFKEGIAVIDLKDAYPTVMEDLQALKAAGGIWLLS 182



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 45/71 (63%), Positives = 50/71 (70%)
 Frame = +3

Query: 687 RGIELPRDMLDIERDLQKNGMKPATNTAKRRAAAEIHGMPQXXXXXXXXXXXXXXXXLTN 866
           R IELPRDMLDIE+DLQKNGMKPATNTAKRRAAA++ G+                  LTN
Sbjct: 211 REIELPRDMLDIEKDLQKNGMKPATNTAKRRAAAQVQGISTKPKTKKKTKEISKKTKLTN 270

Query: 867 AHLPELFQTLR 899
           AHLPELFQ L+
Sbjct: 271 AHLPELFQNLK 281


>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
           sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
           general transcription factor IIE subunit 2-like [Cucumis
           sativus]
          Length = 277

 Score =  189 bits (479), Expect = 1e-45
 Identities = 90/124 (72%), Positives = 107/124 (86%)
 Frame = +1

Query: 136 NTEHLQEINSIRKAPVGAQIKRVINLLFKTREALTPDQINKACYVDANGNKAVFDSLRNN 315
           +TE LQ INSIRK+PVGAQIKRVI+LL +TR+A TP+QIN+ACYVD N NKAV+DSLRNN
Sbjct: 58  DTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNN 117

Query: 316 PKVRYDGERFSYKSKHQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQTLKGSGEI 495
           PKV YDG RFSYKSKH L++K  LL L+R  PEGIAVIDLKD+Y +V++DLQ LK SG++
Sbjct: 118 PKVHYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQV 177

Query: 496 WLLS 507
           WLLS
Sbjct: 178 WLLS 181



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 41/68 (60%), Positives = 45/68 (66%)
 Frame = +3

Query: 687 RGIELPRDMLDIERDLQKNGMKPATNTAKRRAAAEIHGMPQXXXXXXXXXXXXXXXXLTN 866
           R IELPRDMLD+E+DLQKNGMKPATNTAKRRA A+ H                    LTN
Sbjct: 210 REIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPKPKKKKQEISKRTKLTN 268

Query: 867 AHLPELFQ 890
           AHLPELF+
Sbjct: 269 AHLPELFK 276


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  188 bits (477), Expect = 2e-45
 Identities = 93/124 (75%), Positives = 105/124 (84%)
 Frame = +1

Query: 136 NTEHLQEINSIRKAPVGAQIKRVINLLFKTREALTPDQINKACYVDANGNKAVFDSLRNN 315
           +TE LQ INSIRKAP GAQIKRVI+LL +TR+A TP+QIN  CYVD N NKAVFDSLRNN
Sbjct: 61  DTERLQHINSIRKAPAGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNN 120

Query: 316 PKVRYDGERFSYKSKHQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQTLKGSGEI 495
           PKV YDG+RFSYKSKH L++K+ LL LIR  PEGIAVIDLKDSY +V+DDLQ LK  G+I
Sbjct: 121 PKVHYDGKRFSYKSKHDLKDKSQLLVLIRKFPEGIAVIDLKDSYPSVMDDLQALKAVGQI 180

Query: 496 WLLS 507
           WLLS
Sbjct: 181 WLLS 184



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 45/70 (64%), Positives = 50/70 (71%)
 Frame = +3

Query: 687 RGIELPRDMLDIERDLQKNGMKPATNTAKRRAAAEIHGMPQXXXXXXXXXXXXXXXXLTN 866
           RGIELPRDMLDIE+DLQKNGMKPATNTAKRRAAA++ G+                  LTN
Sbjct: 213 RGIELPRDMLDIEKDLQKNGMKPATNTAKRRAAAQVQGISTKQKAKKKKHEISKRTKLTN 272

Query: 867 AHLPELFQTL 896
           AHLPELF+ L
Sbjct: 273 AHLPELFKNL 282


>ref|XP_003611125.1| General transcription factor IIE subunit [Medicago truncatula]
           gi|355512460|gb|AES94083.1| General transcription factor
           IIE subunit [Medicago truncatula]
           gi|388501522|gb|AFK38827.1| unknown [Medicago
           truncatula]
          Length = 270

 Score =  181 bits (459), Expect = 2e-43
 Identities = 90/124 (72%), Positives = 105/124 (84%)
 Frame = +1

Query: 136 NTEHLQEINSIRKAPVGAQIKRVINLLFKTREALTPDQINKACYVDANGNKAVFDSLRNN 315
           +TE LQ INSIRKAPVGAQ+KRVI+LLF+TR+ALT +QIN+ C+VD   NK VFD++R N
Sbjct: 46  DTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKN 105

Query: 316 PKVRYDGERFSYKSKHQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQTLKGSGEI 495
           PKVRYDGERFSYKSKH L++K +LL LIR  PEGIAVIDLKDSY  V++DLQ LKG  EI
Sbjct: 106 PKVRYDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKGGREI 165

Query: 496 WLLS 507
           WLLS
Sbjct: 166 WLLS 169



 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 45/70 (64%), Positives = 50/70 (71%)
 Frame = +3

Query: 687 RGIELPRDMLDIERDLQKNGMKPATNTAKRRAAAEIHGMPQXXXXXXXXXXXXXXXXLTN 866
           RGIELPRDM+DIERDLQKNGMKPATNTAKRR+AA++ G+                  LTN
Sbjct: 198 RGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTN 257

Query: 867 AHLPELFQTL 896
           AHLPELFQ L
Sbjct: 258 AHLPELFQNL 267


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