BLASTX nr result

ID: Salvia21_contig00008245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00008245
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   186   1e-45
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-45
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   182   2e-44
ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   178   4e-43
ref|XP_003525408.1| PREDICTED: general transcription factor IIE ...   176   2e-42

>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  186 bits (473), Expect = 1e-45
 Identities = 100/157 (63%), Positives = 119/157 (75%), Gaps = 1/157 (0%)
 Frame = -1

Query: 468 KSQATLGT-AAKAGNPKATFXXXXXXXXXSLANTKSAAGPAKFSENTEHLQEINSIRKAP 292
           K Q+TL + AAKAG+ K T            A TK      KFS +TE LQ INSIRKAP
Sbjct: 16  KCQSTLTSIAAKAGSSKPTVPQKFTPA----APTKPPTPAVKFSNDTERLQHINSIRKAP 71

Query: 291 VGAQIKRVINLLFKTREALTPDQINKACYVDVNGNKAVFDSLRNNPKVRYDGERFSYKSK 112
           VGAQIKRVI+LL +TR+A TP+QIN+ACYVD N NKAVFDSLRNNPKV YDG+RF+YKSK
Sbjct: 72  VGAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSYDGKRFAYKSK 131

Query: 111 HQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQ 1
           H L++++ LL L+R  PEGIAVIDLKDSY +V++DLQ
Sbjct: 132 HDLKDRSQLLVLVRKFPEGIAVIDLKDSYPSVMEDLQ 168


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  184 bits (466), Expect = 9e-45
 Identities = 97/157 (61%), Positives = 117/157 (74%), Gaps = 1/157 (0%)
 Frame = -1

Query: 468 KSQATLGTAAKAGNPKATFXXXXXXXXXSLANTKSAAGPA-KFSENTEHLQEINSIRKAP 292
           K Q+TL + AK+   K++          + + +     PA KFS +TE LQ INSIRKAP
Sbjct: 16  KCQSTLTSIAKSRPSKSSLTQKTVAVAPAPSTSARTPAPAVKFSNDTERLQHINSIRKAP 75

Query: 291 VGAQIKRVINLLFKTREALTPDQINKACYVDVNGNKAVFDSLRNNPKVRYDGERFSYKSK 112
            GAQIKRVI+LL +TR+A TP+QIN  CYVD+N NKAVFDSLRNNPKV YDG+RFSYKSK
Sbjct: 76  AGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNNPKVHYDGKRFSYKSK 135

Query: 111 HQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQ 1
           H L++K+ LL LIR  PEGIAVIDLKDSY +V+DDLQ
Sbjct: 136 HDLKDKSQLLVLIRKFPEGIAVIDLKDSYPSVMDDLQ 172


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score =  182 bits (463), Expect = 2e-44
 Identities = 101/158 (63%), Positives = 117/158 (74%), Gaps = 2/158 (1%)
 Frame = -1

Query: 468 KSQATLGT-AAKAGNPKATFXXXXXXXXXSLANTKSAAGPA-KFSENTEHLQEINSIRKA 295
           K Q TL + AAKAG+ K +           +  T    GPA KFS +TE LQ I+SIRKA
Sbjct: 16  KCQTTLTSIAAKAGSHKPSITPKIVAPSPIIPRTP---GPAVKFSNDTERLQHIHSIRKA 72

Query: 294 PVGAQIKRVINLLFKTREALTPDQINKACYVDVNGNKAVFDSLRNNPKVRYDGERFSYKS 115
           PVGAQIKRVI+LLF+TR+A TP+QIN+ACYVDVN NKAVFDSLRNNPKV YDG  FSYKS
Sbjct: 73  PVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRHFSYKS 132

Query: 114 KHQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQ 1
           KH L++K  LL LIR   EGIAVIDLKD+Y  V++DLQ
Sbjct: 133 KHDLKDKKQLLYLIREFKEGIAVIDLKDAYPTVMEDLQ 170


>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
           sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
           general transcription factor IIE subunit 2-like [Cucumis
           sativus]
          Length = 277

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/120 (71%), Positives = 102/120 (85%)
 Frame = -1

Query: 360 AGPAKFSENTEHLQEINSIRKAPVGAQIKRVINLLFKTREALTPDQINKACYVDVNGNKA 181
           A   KFS +TE LQ INSIRK+PVGAQIKRVI+LL +TR+A TP+QIN+ACYVD+N NKA
Sbjct: 50  APAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKA 109

Query: 180 VFDSLRNNPKVRYDGERFSYKSKHQLQNKTDLLQLIRTRPEGIAVIDLKDSYTAVLDDLQ 1
           V+DSLRNNPKV YDG RFSYKSKH L++K  LL L+R  PEGIAVIDLKD+Y +V++DLQ
Sbjct: 110 VYDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQ 169


>ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 279

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/126 (68%), Positives = 106/126 (84%)
 Frame = -1

Query: 378 ANTKSAAGPAKFSENTEHLQEINSIRKAPVGAQIKRVINLLFKTREALTPDQINKACYVD 199
           AN ++AA   KFS +TE LQ INSIRKAPVGAQ+KRVI+LL +TR+A TP+QIN ACYVD
Sbjct: 41  ANGRNAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINGACYVD 100

Query: 198 VNGNKAVFDSLRNNPKVRYDGERFSYKSKHQLQNKTDLLQLIRTRPEGIAVIDLKDSYTA 19
           +  NK VF++LR NPKV YDG+RFSYKSK+ L++KT+LLQLIR  PEG+AVIDLKD+Y  
Sbjct: 101 MKANKDVFENLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPT 160

Query: 18  VLDDLQ 1
           V++DLQ
Sbjct: 161 VMEDLQ 166


Top