BLASTX nr result

ID: Salvia21_contig00007899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00007899
         (1698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36896.3| unnamed protein product [Vitis vinifera]              444   e-122
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   437   e-120
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica...   407   e-111
ref|NP_174605.1| putative RNA helicase [Arabidopsis thaliana] gi...   406   e-110
ref|XP_002893766.1| helicase domain-containing protein [Arabidop...   405   e-110

>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  444 bits (1141), Expect = e-122
 Identities = 251/434 (57%), Positives = 298/434 (68%), Gaps = 3/434 (0%)
 Frame = +2

Query: 404  IETLEKYKIKDDVYSLMWSSRNLGQXXXXXXXXXXXXXFSKAGLELPHAEKAHTKRKRDN 583
            IETLEKYKI++D +SL+ SS+NLGQ             FSKAGLE+PH++       R  
Sbjct: 80   IETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSD-------RPF 132

Query: 584  ASQDIDIEVYEDEICIPATDVHSNTNMQSSHDEPDTSDRRDGGSFKEVA-NDDTQPSLPG 760
             SQD ++E               ++N   S  E D SD     +  E+A N    P+LP 
Sbjct: 133  KSQDGEME--------------PDSNKIQSKQEFDESD-----AITELAVNSRHSPTLPA 173

Query: 761  SE--EKSTQSCQIEEIIKPKDAMDADPIYNPEDEYNHSNCTSSRNLVTPTVVHVSRPKDV 934
             E  EK+  +   +       +  AD   N +   N  +C S + + TPTVVHVSRP +V
Sbjct: 174  KEVSEKNYDTSMQDRRNSTPTSTTADGQKNIKGTSNLPDC-SLQPITTPTVVHVSRPTEV 232

Query: 935  EKQRMGLPIVMMXXXXXXXXXXXXXXXXCGETGCGKTTQVPQFLYEAGFGSRHSNTGGGI 1114
            E  R  LPIVMM                CGETGCGKTTQVPQFLYEAGFGS+ ++   GI
Sbjct: 233  ENNRKDLPIVMMEQEIMEAINDHTAVIICGETGCGKTTQVPQFLYEAGFGSKQASVQSGI 292

Query: 1115 IGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKVGENCSIKFMTDGILLREVQN 1294
            IGVTQPRRVAVLATAKRVAFELGL LGKEVGFQVRHD+ +G++CSIKFMTDGILLREVQN
Sbjct: 293  IGVTQPRRVAVLATAKRVAFELGLSLGKEVGFQVRHDKMIGDSCSIKFMTDGILLREVQN 352

Query: 1295 DFLLKRYSVLILDEAHERSLNTDILIGMLSRVIQERQREYEMQENRILAGETIECENRIY 1474
            DF L+RYSV+ILDEAHERSLNTDILIGMLSRVIQ RQ+ YE Q+  +L+G  I  E+ + 
Sbjct: 353  DFSLRRYSVIILDEAHERSLNTDILIGMLSRVIQVRQKLYEEQQQMMLSGVRISPESMVP 412

Query: 1475 PLKLVLMSATLRVEDFVSGTKIFRNPPPVIEVPTRQYPVTTHFSKKTEIVDYIGQAYKKV 1654
             LKLVLMSATLRVEDF+SG ++F  PPPVIEVP+RQ+PVT HFSK+TEIVDYIGQAYKK+
Sbjct: 413  QLKLVLMSATLRVEDFISGRRLFHTPPPVIEVPSRQFPVTIHFSKRTEIVDYIGQAYKKI 472

Query: 1655 LSIHKRLPPGGILV 1696
            LSIHK+LP GGILV
Sbjct: 473  LSIHKKLPQGGILV 486


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  437 bits (1124), Expect = e-120
 Identities = 246/448 (54%), Positives = 300/448 (66%), Gaps = 17/448 (3%)
 Frame = +2

Query: 404  IETLEKYKIKDDVYSLMWSSRNLGQXXXXXXXXXXXXXFSKAGLELPHAE---------- 553
            IETLEKYKI++D +SL+ SS+NLGQ             FSKAGLE+PH++          
Sbjct: 159  IETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQDGEM 218

Query: 554  -----KAHTKRKRDNASQDIDIEVYEDEICIPATDVHSNTNMQSSHDEPDTSDRRDGGSF 718
                 K  +K++ D +       V  + +   +  +   + +  S +    S        
Sbjct: 219  EPDSNKIQSKQEFDESDAMWPRMVQREVLSNASISLGFTSELVCSTELAVNSRHSPTLPA 278

Query: 719  KEVA--NDDTQPSLPGSEEKSTQSCQIEEIIKPKDAMDADPIYNPEDEYNHSNCTSSRNL 892
            KEV+  N DT      +   ++ +   ++ IK KD  D +   N     N  +C S + +
Sbjct: 279  KEVSEKNYDTSMQDRRNSTPTSTTADGQKNIKSKDVPDWNLNLNFRGTSNLPDC-SLQPI 337

Query: 893  VTPTVVHVSRPKDVEKQRMGLPIVMMXXXXXXXXXXXXXXXXCGETGCGKTTQVPQFLYE 1072
             TPTVVHVSRP +VE  R  LPIVMM                CGETGCGKTTQVPQFLYE
Sbjct: 338  TTPTVVHVSRPTEVENNRKDLPIVMMEQEIMEAINDHTAVIICGETGCGKTTQVPQFLYE 397

Query: 1073 AGFGSRHSNTGGGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKVGENCSI 1252
            AGFGS+ ++   GIIGVTQPRRVAVLATAKRVAFELGL LGKEVGFQVRHD+ +G++CSI
Sbjct: 398  AGFGSKQASVQSGIIGVTQPRRVAVLATAKRVAFELGLSLGKEVGFQVRHDKMIGDSCSI 457

Query: 1253 KFMTDGILLREVQNDFLLKRYSVLILDEAHERSLNTDILIGMLSRVIQERQREYEMQENR 1432
            KFMTDGILLREVQNDF L+RYSV+ILDEAHERSLNTDILIGMLSRVIQ RQ+ YE Q+  
Sbjct: 458  KFMTDGILLREVQNDFSLRRYSVIILDEAHERSLNTDILIGMLSRVIQVRQKLYEEQQQM 517

Query: 1433 ILAGETIECENRIYPLKLVLMSATLRVEDFVSGTKIFRNPPPVIEVPTRQYPVTTHFSKK 1612
            +L+G  I  E+ +  LKLVLMSATLRVEDF+SG ++F  PPPVIEVP+RQ+PVT HFSK+
Sbjct: 518  MLSGVRISPESMVPQLKLVLMSATLRVEDFISGRRLFHTPPPVIEVPSRQFPVTIHFSKR 577

Query: 1613 TEIVDYIGQAYKKVLSIHKRLPPGGILV 1696
            TEIVDYIGQAYKK+LSIHK+LP GGILV
Sbjct: 578  TEIVDYIGQAYKKILSIHKKLPQGGILV 605


>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
            max]
          Length = 1380

 Score =  407 bits (1045), Expect = e-111
 Identities = 234/443 (52%), Positives = 285/443 (64%), Gaps = 12/443 (2%)
 Frame = +2

Query: 404  IETLEKYKIKDDVYSLMWSSRNLGQXXXXXXXXXXXXXFSKAGLEL--------PHAEKA 559
            I+TL +  + +  Y L+ SS N+ +               K GLE+        P  ++ 
Sbjct: 137  IKTLNENTLPEYAYPLLLSSCNINRDETMKEKRRRAVHLLKEGLEVSYDGLSMKPETDEI 196

Query: 560  HTKRKRDNASQDIDIEVYEDEICIPATDVHSNTNMQSSH-DEPDTSDRRDGGSFKEVAND 736
            H ++  +    DI I+    E  +  T V   ++ +  H +E +T        +K V+  
Sbjct: 197  HLEQVDEVVENDIQIQPISPEEVLNTTSVSLESSQEPVHGNEVET--------YKYVSEH 248

Query: 737  DTQPSLPGSEEK---STQSCQIEEIIKPKDAMDADPIYNPEDEYNHSNCTSSRNLVTPTV 907
             T  S+    ++   S  SC I+EI   K     +  +N  +  N    ++ R    PTV
Sbjct: 249  PTDISIDNHLDEIRSSPMSCSIDEIKGTKSKYRTNENHNSNELSNLPGYSAPRRSNVPTV 308

Query: 908  VHVSRPKDVEKQRMGLPIVMMXXXXXXXXXXXXXXXXCGETGCGKTTQVPQFLYEAGFGS 1087
            VHV RP +VE +R  LPIVMM                CGETGCGKTTQVPQFLYEAG+GS
Sbjct: 309  VHVYRPTEVEDKRKDLPIVMMEQEIMEAINDRSSVIICGETGCGKTTQVPQFLYEAGYGS 368

Query: 1088 RHSNTGGGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKVGENCSIKFMTD 1267
                   GIIGVTQPRRVAVLATAKRVA+ELGL LGKEVGFQVR+D+K+GE+CSIKFMTD
Sbjct: 369  SK-----GIIGVTQPRRVAVLATAKRVAYELGLHLGKEVGFQVRYDKKIGESCSIKFMTD 423

Query: 1268 GILLREVQNDFLLKRYSVLILDEAHERSLNTDILIGMLSRVIQERQREYEMQENRILAGE 1447
            GILLREVQND LL+RYSVLILDEAHERSLNTDILIGMLSRVI+ RQ  Y  Q+  IL+GE
Sbjct: 424  GILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIKTRQMIYNEQQKMILSGE 483

Query: 1448 TIECENRIYPLKLVLMSATLRVEDFVSGTKIFRNPPPVIEVPTRQYPVTTHFSKKTEIVD 1627
             I  E  ++PLKLVLMSATLRV+DF SG K+F  PPPVIEVPTRQ+PVT +FSKKTE  D
Sbjct: 484  NISPEKMVFPLKLVLMSATLRVQDFTSG-KLFHTPPPVIEVPTRQFPVTAYFSKKTEKTD 542

Query: 1628 YIGQAYKKVLSIHKRLPPGGILV 1696
            YIG+AYKKVL+IHKRLPPGGILV
Sbjct: 543  YIGEAYKKVLAIHKRLPPGGILV 565


>ref|NP_174605.1| putative RNA helicase [Arabidopsis thaliana]
            gi|12322388|gb|AAG51220.1|AC051630_17 RNA helicase,
            putative; 27866-23496 [Arabidopsis thaliana]
            gi|332193467|gb|AEE31588.1| putative RNA helicase
            [Arabidopsis thaliana]
          Length = 1237

 Score =  406 bits (1043), Expect = e-110
 Identities = 228/430 (53%), Positives = 286/430 (66%)
 Frame = +2

Query: 407  ETLEKYKIKDDVYSLMWSSRNLGQXXXXXXXXXXXXXFSKAGLELPHAEKAHTKRKRDNA 586
            E L+KYKI +DV SL+ SS+ +G+              SKAG+E  H++++  +   D+ 
Sbjct: 81   ELLDKYKISEDVSSLLQSSKVIGRSATKLEKRRRAMQLSKAGVETEHSDESVEQNDNDDD 140

Query: 587  SQDIDIEVYEDEICIPATDVHSNTNMQSSHDEPDTSDRRDGGSFKEVANDDTQPSLPGSE 766
            S  +D     + + I      +++  Q  H +   S      S  ++  DDT   +P + 
Sbjct: 141  SC-MDEPTTPEHVEIETPTFVTDSEQQLVHADLMISAEE---SSSKLEVDDTVDMIPLTT 196

Query: 767  EKSTQSCQIEEIIKPKDAMDADPIYNPEDEYNHSNCTSSRNLVTPTVVHVSRPKDVEKQR 946
             +      ++ +I+ +D     P                   V   VVHVSRP +VE+ R
Sbjct: 197  CRDDDEDSMDGLIENEDVTVQGP------------------RVPAFVVHVSRPAEVEETR 238

Query: 947  MGLPIVMMXXXXXXXXXXXXXXXXCGETGCGKTTQVPQFLYEAGFGSRHSNTGGGIIGVT 1126
              LPIVMM                 G+TGCGKTTQVPQFLYEAGFGS+  ++  GIIG+T
Sbjct: 239  KDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGIT 298

Query: 1127 QPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKVGENCSIKFMTDGILLREVQNDFLL 1306
            QPRRVAVLATAKRVAFELG+RLGKEVGFQVR+D+K+GEN SIKFMTDGILLRE+QNDFLL
Sbjct: 299  QPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLL 358

Query: 1307 KRYSVLILDEAHERSLNTDILIGMLSRVIQERQREYEMQENRILAGETIECENRIYPLKL 1486
            +RYSV+ILDEAHERSLNTDILIGML+RVI+ RQ  YE Q+  + +G T+  E +I PLKL
Sbjct: 359  RRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKL 418

Query: 1487 VLMSATLRVEDFVSGTKIFRNPPPVIEVPTRQYPVTTHFSKKTEIVDYIGQAYKKVLSIH 1666
            +LMSATLRVEDFVSG ++F N PP+IEVPTRQYPVT HFSKKTEIVDYIG+AYKKV+SIH
Sbjct: 419  ILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIH 478

Query: 1667 KRLPPGGILV 1696
            K+LP GGILV
Sbjct: 479  KKLPQGGILV 488


>ref|XP_002893766.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297339608|gb|EFH70025.1| helicase domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1245

 Score =  405 bits (1042), Expect = e-110
 Identities = 231/431 (53%), Positives = 284/431 (65%), Gaps = 1/431 (0%)
 Frame = +2

Query: 407  ETLEKYKIKDDVYSLMWSSRNLGQXXXXXXXXXXXXXFSKAGLELPHAEKAHTKRKRDNA 586
            E L+ YKI +DV SL+ SS+ +G+              SKAG+E  H++++  +   D++
Sbjct: 79   ELLDTYKISEDVSSLLQSSKVIGRSATKLEKRRRAMQLSKAGVETEHSDESVERNDDDDS 138

Query: 587  SQDIDIEVYEDEICIPATDVHSNTNMQSSHD-EPDTSDRRDGGSFKEVANDDTQPSLPGS 763
              D        EI IP    +S   +   H+   D     +  S K V +D+    L   
Sbjct: 139  CMDKPTTPEHVEIEIPTFVTYSEQQLVHEHELGSDLMFSAEETSSKLVVDDNVDMILQ-- 196

Query: 764  EEKSTQSCQIEEIIKPKDAMDADPIYNPEDEYNHSNCTSSRNLVTPTVVHVSRPKDVEKQ 943
                  +C+ +E    +D+   D     ED       T     V   VVHV RP +VE+ 
Sbjct: 197  -----TTCRDDE----EDSQRMDGTIENED------VTVQGPRVPAFVVHVLRPAEVEET 241

Query: 944  RMGLPIVMMXXXXXXXXXXXXXXXXCGETGCGKTTQVPQFLYEAGFGSRHSNTGGGIIGV 1123
            R  LPIVMM                 G+TGCGKTTQVPQFLYEAGFGS+  ++  GIIG+
Sbjct: 242  RKDLPIVMMEQEIMEAINRHPTVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGI 301

Query: 1124 TQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKVGENCSIKFMTDGILLREVQNDFL 1303
            TQPRRVAVLATAKRVAFELG+RLGKEVGFQVR+D+K+GEN SIKFMTDGILLRE+QNDFL
Sbjct: 302  TQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFL 361

Query: 1304 LKRYSVLILDEAHERSLNTDILIGMLSRVIQERQREYEMQENRILAGETIECENRIYPLK 1483
            L+RYSV+ILDEAHERSLNTDILIGML+RVI+ RQ  YE Q+  + +G T+  E +I PLK
Sbjct: 362  LRRYSVVILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQTSLQSGGTVTSEYQITPLK 421

Query: 1484 LVLMSATLRVEDFVSGTKIFRNPPPVIEVPTRQYPVTTHFSKKTEIVDYIGQAYKKVLSI 1663
            L+LMSATLRVEDFVSG ++F   PP+IEVPTRQYPVT HFS+KTEIVDYIGQAYKKV+SI
Sbjct: 422  LILMSATLRVEDFVSGKRLFPKIPPLIEVPTRQYPVTIHFSRKTEIVDYIGQAYKKVMSI 481

Query: 1664 HKRLPPGGILV 1696
            HK+LP GGILV
Sbjct: 482  HKKLPQGGILV 492


Top