BLASTX nr result

ID: Salvia21_contig00007849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00007849
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ...   206   4e-51
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]      202   8e-50
ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro...   201   2e-49
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com...   199   9e-49
ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloro...   197   3e-48

>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
           Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
           ribosomal protein L27 [Nicotiana tabacum]
           gi|170326|gb|AAA34115.1| ribosomal protein L27
           [Nicotiana tabacum]
          Length = 179

 Score =  206 bits (525), Expect = 4e-51
 Identities = 100/113 (88%), Positives = 104/113 (92%)
 Frame = +2

Query: 131 VGQNAAVLLPMKPPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKAGSIIVRQRG 310
           V    +V  P+K PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAK GSIIVRQRG
Sbjct: 33  VAPKFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGSIIVRQRG 92

Query: 311 TKFHPGNNVGLGRDHTIFSLIDGLVKFEKFGPDKKKISVYPREVQPENPNSYR 469
           TKFHPG NVGLG+DHTIFSLIDGLVKFEKFGPD+KKISVYPREVQPENPNSYR
Sbjct: 93  TKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYPREVQPENPNSYR 145


>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 197

 Score =  202 bits (514), Expect = 8e-50
 Identities = 109/187 (58%), Positives = 124/187 (66%), Gaps = 6/187 (3%)
 Frame = +2

Query: 23  MAAVSLSFNLAGAXXXXXXXXXXXXXXXXXXXXXIHVGQNAAVLLPMKPP------LTIE 184
           MA +++SFNL G+                     +  G  ++ LLP K P      LTI+
Sbjct: 1   MALMAVSFNLIGSFKGLSLSSSSSSSFFKGDAGSLKFGLKSSALLPFKAPVKAPLPLTIQ 60

Query: 185 SAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKAGSIIVRQRGTKFHPGNNVGLGRDHTIF 364
            AHKKGAGSTKNGRDS G+RLGVKI+GDQ AK G+IIVRQRGTKFHPG NVG+G+DHTIF
Sbjct: 61  MAHKKGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFHPGKNVGIGKDHTIF 120

Query: 365 SLIDGLVKFEKFGPDKKKISVYPREVQPENPNSYRAXXXXXXXXXXXXXXXXXXXXXGIV 544
           SLIDGLVKFEKFGPD+KKISVYPRE+QPENPNSYRA                     GIV
Sbjct: 121 SLIDGLVKFEKFGPDRKKISVYPREIQPENPNSYRA---RKRENFRLQRERKKARKEGIV 177

Query: 545 TQPQLVL 565
            QPQLVL
Sbjct: 178 AQPQLVL 184


>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
           [Cucumis sativus] gi|449441698|ref|XP_004138619.1|
           PREDICTED: 50S ribosomal protein L27, chloroplastic-like
           isoform 2 [Cucumis sativus]
           gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
           ribosomal protein L27, chloroplastic-like isoform 1
           [Cucumis sativus] gi|449518797|ref|XP_004166422.1|
           PREDICTED: 50S ribosomal protein L27, chloroplastic-like
           isoform 2 [Cucumis sativus]
          Length = 183

 Score =  201 bits (510), Expect = 2e-49
 Identities = 104/147 (70%), Positives = 111/147 (75%)
 Frame = +2

Query: 125 IHVGQNAAVLLPMKPPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKAGSIIVRQ 304
           IH     +V  P   PLTIE+AHKKGAGSTKNGRDS GQRLGVKIFGDQVAK GSIIVRQ
Sbjct: 28  IHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQ 87

Query: 305 RGTKFHPGNNVGLGRDHTIFSLIDGLVKFEKFGPDKKKISVYPREVQPENPNSYRAXXXX 484
           RGTKFH G NVGLG+DHTIFSLIDGLVKFEK+GPDKKK+SVYPREVQPENPNSYRA    
Sbjct: 88  RGTKFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRA---R 144

Query: 485 XXXXXXXXXXXXXXXXXGIVTQPQLVL 565
                            GI+ QPQL+L
Sbjct: 145 KREYFRLQRERKKARKEGIIAQPQLLL 171


>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
           gi|223549405|gb|EEF50893.1| ribosomal protein L27,
           putative [Ricinus communis]
          Length = 195

 Score =  199 bits (505), Expect = 9e-49
 Identities = 102/141 (72%), Positives = 111/141 (78%), Gaps = 2/141 (1%)
 Frame = +2

Query: 149 VLLPMKPP--LTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKAGSIIVRQRGTKFH 322
           V LP+K P  LTIE AHKKGAGSTKNGRDSPGQRLGVKIFG+Q AK G+IIVRQRGTKFH
Sbjct: 45  VSLPLKAPFPLTIEMAHKKGAGSTKNGRDSPGQRLGVKIFGNQAAKPGAIIVRQRGTKFH 104

Query: 323 PGNNVGLGRDHTIFSLIDGLVKFEKFGPDKKKISVYPREVQPENPNSYRAXXXXXXXXXX 502
           PG NVGLG+DHTIFSLIDGLVKFEKFGPD+KK+SVYPREVQPENPNSYRA          
Sbjct: 105 PGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKVSVYPREVQPENPNSYRA---RKREYFR 161

Query: 503 XXXXXXXXXXXGIVTQPQLVL 565
                      G++ +PQLVL
Sbjct: 162 LQRERKKARKEGLIAEPQLVL 182


>ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Glycine
           max]
          Length = 194

 Score =  197 bits (500), Expect = 3e-48
 Identities = 98/149 (65%), Positives = 114/149 (76%)
 Frame = +2

Query: 26  AAVSLSFNLAGAXXXXXXXXXXXXXXXXXXXXXIHVGQNAAVLLPMKPPLTIESAHKKGA 205
           A++ +SFNLA A                     +  G  + V LP + PLTIE+AHKKGA
Sbjct: 5   ASMCMSFNLATAFKGLSFSSSSSSFFAGSGSYSLRAGPTSVVSLPRRCPLTIENAHKKGA 64

Query: 206 GSTKNGRDSPGQRLGVKIFGDQVAKAGSIIVRQRGTKFHPGNNVGLGRDHTIFSLIDGLV 385
           GSTKNGRDS G+RLGVKI+GDQVAK GSIIVRQRGTKFH G NVGLG+D+TIFSLIDG+V
Sbjct: 65  GSTKNGRDSQGKRLGVKIYGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDYTIFSLIDGVV 124

Query: 386 KFEKFGPDKKKISVYPREVQPENPNSYRA 472
           KFEK+GPD+KK+SVYP+EVQPENPNSYRA
Sbjct: 125 KFEKYGPDRKKVSVYPQEVQPENPNSYRA 153


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