BLASTX nr result

ID: Salvia21_contig00006184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00006184
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ST69.1|RR5_SPIOL RecName: Full=30S ribosomal protein S5, ch...    90   2e-16
ref|XP_002274092.2| PREDICTED: 30S ribosomal protein S5, chlorop...    87   1e-15
emb|CBI30587.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop...    86   3e-15
ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop...    86   3e-15

>sp|Q9ST69.1|RR5_SPIOL RecName: Full=30S ribosomal protein S5, chloroplastic; Flags:
           Precursor gi|188036206|pdb|3BBN|E Chain E, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|5725342|emb|CAA63650.1| ribosomal protein S5
           [Spinacia oleracea]
          Length = 308

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/96 (47%), Positives = 57/96 (59%)
 Frame = +3

Query: 234 DFEIPFFEGEDGEVTAAFSXXXXXXXXXXXXSFDDGPPXXXXXXXXXXXXLYGAAYSGES 413
           D +I FFE ++ +    F             + D+ P             LYGAAYSGES
Sbjct: 61  DIDITFFEQDNPDEEITFDPPEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGES 120

Query: 414 FLGNDVFEMDAKVKKATGFGSKSKKEKVRDGFDERV 521
            LGNDV+ MD+K+KKATGFGSKSKKEK+RDGF+E V
Sbjct: 121 LLGNDVYAMDSKIKKATGFGSKSKKEKIRDGFEENV 156


>ref|XP_002274092.2| PREDICTED: 30S ribosomal protein S5, chloroplastic, partial [Vitis
           vinifera]
          Length = 257

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/96 (48%), Positives = 53/96 (55%)
 Frame = +3

Query: 234 DFEIPFFEGEDGEVTAAFSXXXXXXXXXXXXSFDDGPPXXXXXXXXXXXXLYGAAYSGES 413
           D E  FFE    +    F             SFDDGP             +YG AYSG S
Sbjct: 93  DSETTFFEDPSLQEEVVFEPTPPPEGFVPPPSFDDGPMETEDEIAAAYEEIYGPAYSGVS 152

Query: 414 FLGNDVFEMDAKVKKATGFGSKSKKEKVRDGFDERV 521
            LGND F MD+K+KK+TGFGSK KKEKVRDGF+ERV
Sbjct: 153 LLGNDPFVMDSKMKKSTGFGSKVKKEKVRDGFEERV 188


>emb|CBI30587.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/96 (48%), Positives = 53/96 (55%)
 Frame = +3

Query: 234 DFEIPFFEGEDGEVTAAFSXXXXXXXXXXXXSFDDGPPXXXXXXXXXXXXLYGAAYSGES 413
           D E  FFE    +    F             SFDDGP             +YG AYSG S
Sbjct: 72  DSETTFFEDPSLQEEVVFEPTPPPEGFVPPPSFDDGPMETEDEIAAAYEEIYGPAYSGVS 131

Query: 414 FLGNDVFEMDAKVKKATGFGSKSKKEKVRDGFDERV 521
            LGND F MD+K+KK+TGFGSK KKEKVRDGF+ERV
Sbjct: 132 LLGNDPFVMDSKMKKSTGFGSKVKKEKVRDGFEERV 167


>ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine
           max]
          Length = 316

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/96 (47%), Positives = 54/96 (56%)
 Frame = +3

Query: 234 DFEIPFFEGEDGEVTAAFSXXXXXXXXXXXXSFDDGPPXXXXXXXXXXXXLYGAAYSGES 413
           D +  FF+  + +    F+            SFDDGP             LYG  YSG S
Sbjct: 69  DIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSGVS 128

Query: 414 FLGNDVFEMDAKVKKATGFGSKSKKEKVRDGFDERV 521
            LGNDV+ MDAKVKK TGFGS +KKEKVRDGF+ERV
Sbjct: 129 VLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERV 164


>ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine
           max]
          Length = 300

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/96 (47%), Positives = 54/96 (56%)
 Frame = +3

Query: 234 DFEIPFFEGEDGEVTAAFSXXXXXXXXXXXXSFDDGPPXXXXXXXXXXXXLYGAAYSGES 413
           D +  FF+  + +    F+            SFDDGP             LYG  YSG S
Sbjct: 53  DIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSGVS 112

Query: 414 FLGNDVFEMDAKVKKATGFGSKSKKEKVRDGFDERV 521
            LGNDV+ MDAKVKK TGFGS +KKEKVRDGF+ERV
Sbjct: 113 VLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERV 148


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