BLASTX nr result

ID: Salvia21_contig00006036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00006036
         (1578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36847.3| unnamed protein product [Vitis vinifera]              223   8e-56
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   223   8e-56
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   223   8e-56
ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   219   2e-54
ref|XP_002523079.1| arginine/serine-rich splicing factor, putati...   216   1e-53

>emb|CBI36847.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  223 bits (569), Expect = 8e-56
 Identities = 111/142 (78%), Positives = 118/142 (83%), Gaps = 2/142 (1%)
 Frame = +1

Query: 1   YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGNASSTDRQTXXXXXXXXXXXX 180
           YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRG++SS DR +            
Sbjct: 47  YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGAS 106

Query: 181 X--EYRVLVTGLPHSASWQDLKDHMRRAGDVCFSQVFHEGSGKTGIVDYTNFDDMKYAIK 354
              EYRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFH+G G  GIVDYTN+DDMK+AI+
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIR 166

Query: 355 KLDGSEFRNAFSRARVHVKEYD 420
           KLD SEFRNAFSRA V VKEYD
Sbjct: 167 KLDDSEFRNAFSRAYVRVKEYD 188


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score =  223 bits (569), Expect = 8e-56
 Identities = 111/142 (78%), Positives = 118/142 (83%), Gaps = 2/142 (1%)
 Frame = +1

Query: 1   YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGNASSTDRQTXXXXXXXXXXXX 180
           YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRG++SS DR +            
Sbjct: 47  YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGAS 106

Query: 181 X--EYRVLVTGLPHSASWQDLKDHMRRAGDVCFSQVFHEGSGKTGIVDYTNFDDMKYAIK 354
              EYRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFH+G G  GIVDYTN+DDMK+AI+
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIR 166

Query: 355 KLDGSEFRNAFSRARVHVKEYD 420
           KLD SEFRNAFSRA V VKEYD
Sbjct: 167 KLDDSEFRNAFSRAYVRVKEYD 188


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  223 bits (569), Expect = 8e-56
 Identities = 111/142 (78%), Positives = 118/142 (83%), Gaps = 2/142 (1%)
 Frame = +1

Query: 1   YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGNASSTDRQTXXXXXXXXXXXX 180
           YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRG++SS DR +            
Sbjct: 47  YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGAS 106

Query: 181 X--EYRVLVTGLPHSASWQDLKDHMRRAGDVCFSQVFHEGSGKTGIVDYTNFDDMKYAIK 354
              EYRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFH+G G  GIVDYTN+DDMK+AI+
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIR 166

Query: 355 KLDGSEFRNAFSRARVHVKEYD 420
           KLD SEFRNAFSRA V VKEYD
Sbjct: 167 KLDDSEFRNAFSRAYVRVKEYD 188


>ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
           gi|449498497|ref|XP_004160553.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 309

 Score =  219 bits (557), Expect = 2e-54
 Identities = 108/142 (76%), Positives = 118/142 (83%), Gaps = 2/142 (1%)
 Frame = +1

Query: 1   YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGNASSTDRQTXXXXXXXXXXXX 180
           YAFVEFE++ DA+DAIRGRDGYDFDGHRLRVELAHGGRG++SS DR +            
Sbjct: 47  YAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSNDRYSSHGGSRGGRGVS 106

Query: 181 X--EYRVLVTGLPHSASWQDLKDHMRRAGDVCFSQVFHEGSGKTGIVDYTNFDDMKYAIK 354
              +YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVF +GSG TGIVDYTN+DDMKYAIK
Sbjct: 107 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIK 166

Query: 355 KLDGSEFRNAFSRARVHVKEYD 420
           KLD SEFRNAFSRA V V+EYD
Sbjct: 167 KLDDSEFRNAFSRAYVRVREYD 188


>ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537641|gb|EEF39264.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 292

 Score =  216 bits (550), Expect = 1e-53
 Identities = 110/142 (77%), Positives = 119/142 (83%), Gaps = 2/142 (1%)
 Frame = +1

Query: 1   YAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGNASSTDRQTXXXXXXXXXXXX 180
           YAFVEFEE+RDAEDAIRGRDGYDFDGH+LRVELAHGGRG++SS DR +            
Sbjct: 47  YAFVEFEEARDAEDAIRGRDGYDFDGHQLRVELAHGGRGHSSS-DRHSSHSGGGRGRGVS 105

Query: 181 X--EYRVLVTGLPHSASWQDLKDHMRRAGDVCFSQVFHEGSGKTGIVDYTNFDDMKYAIK 354
              EYRVLVTGLP SASWQDLKDHMRRAGDVCFSQVF +GSG TGIVDYTN++DMK+AIK
Sbjct: 106 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIK 165

Query: 355 KLDGSEFRNAFSRARVHVKEYD 420
           KLD SEFRNAFSRA V VKEYD
Sbjct: 166 KLDDSEFRNAFSRAYVRVKEYD 187


Top