BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00006010
         (2367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...  1305   0.0  
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...  1279   0.0  
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu...  1273   0.0  
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido...  1253   0.0  
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]...  1253   0.0  

>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score = 1305 bits (3378), Expect = 0.0
 Identities = 654/771 (84%), Positives = 694/771 (90%), Gaps = 6/771 (0%)
 Frame = +2

Query: 23   MGNGDKNRPSKRIKFS-KDEHRASTAEDYSSHFGEDLEDDPRDGE--GKKRDFSKLELKP 193
            MG+G+K RPSKR K S KDEH+    ED  +++GE+ EDD RDGE  GKKRDF+KLELK 
Sbjct: 1    MGHGEKGRPSKRHKSSSKDEHKNPVVEDEDAYYGEEFEDDYRDGEKEGKKRDFTKLELKV 60

Query: 194  DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 373
            DH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV
Sbjct: 61   DHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 120

Query: 374  GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 553
            GLETETII+VL+KLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YFVESPFPEVLKTLL
Sbjct: 121  GLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLL 180

Query: 554  KDDVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXXIDPT 733
            +D+VI R+RIS EGS G DGFT+ K+ GEIEG H                      +DP 
Sbjct: 181  RDEVISRSRISHEGSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPA 240

Query: 734  QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 913
            QVENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKP AQPRPYQEKSLSKMFGNGRA
Sbjct: 241  QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRA 300

Query: 914  RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEEQICRFT 1093
            RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTI++EQICRFT
Sbjct: 301  RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFT 360

Query: 1094 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEIRNREWGLLLMDEVHVVPAQMFR 1273
            SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIEEIRNREWGLLLMDEVHVVPA MFR
Sbjct: 361  SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR 420

Query: 1274 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 1453
            KVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC
Sbjct: 421  KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 480

Query: 1454 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 1633
            PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE
Sbjct: 481  PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 540

Query: 1634 YAMKLRKPMIYGATSHPERTKILEAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHA 1813
            YAMKLRKPMIYGATSH ERTKILEAFKT +DVNTIFLSKVGDNSIDIPEANVIIQISSHA
Sbjct: 541  YAMKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHA 600

Query: 1814 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 1993
            GSRRQEAQRLGRILRAKG+ QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG
Sbjct: 601  GSRRQEAQRLGRILRAKGRLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 660

Query: 1994 YSFKVITSLPPADTGAELSYHRLDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 2173
            YSFK+ITSLPP D+GA+LSYHRLD+QLALLGKVLSAGD+ VGLEQL+EDADDIALQK   
Sbjct: 661  YSFKIITSLPPPDSGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALQKARR 720

Query: 2174 XXXXXXXXXXXNGRVYMEYSTGKKLH---GQMKSKPKDPAKRHHLFKKRFG 2317
                       +G VYMEY+TG+  H   GQ+K KPKDP+KRHHLFK+RFG
Sbjct: 721  SVGSMSAMSGASGMVYMEYNTGRNKHGGQGQIKGKPKDPSKRHHLFKRRFG 771


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score = 1279 bits (3310), Expect = 0.0
 Identities = 646/769 (84%), Positives = 687/769 (89%), Gaps = 4/769 (0%)
 Frame = +2

Query: 23   MGNGDKNRPSKRIKFSKDEHRASTAEDYSSHFGEDLEDD-PRDGEGKKRDFSKLELKPDH 199
            MG+G+K RPSK+ K S D+HR++  ED   + GED+EDD P DGEGKK+DFSKLELK DH
Sbjct: 1    MGHGEKGRPSKKQKSSNDDHRSTIMEDEDVYCGEDMEDDRPDDGEGKKKDFSKLELKLDH 60

Query: 200  MNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 379
             NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL
Sbjct: 61   ANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 120

Query: 380  ETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLLKD 559
            ETETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+Y VESPFPEVLK LLKD
Sbjct: 121  ETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKD 180

Query: 560  DVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXXIDPTQV 739
            +VI RAR+ SE       FT+ K+AGEI  +H                      +DP+QV
Sbjct: 181  EVISRARLVSEAHVNGS-FTISKTAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQV 239

Query: 740  ENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRARS 919
            ENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRARS
Sbjct: 240  ENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARS 299

Query: 920  GIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEEQICRFTSD 1099
            GIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQF+LWSTI+EEQICRFTSD
Sbjct: 300  GIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSD 359

Query: 1100 SKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEIRNREWGLLLMDEVHVVPAQMFRKV 1279
            SKERF+GNAGVVVTTYNM+AFGGKRSEE+EKIIEEIRNREWGLLLMDEVHVVPA MFRKV
Sbjct: 360  SKERFQGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 419

Query: 1280 IALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM 1459
            I+LTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM
Sbjct: 420  ISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM 479

Query: 1460 TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 1639
            TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA
Sbjct: 480  TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 539

Query: 1640 MKLRKPMIYGATSHPERTKILEAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGS 1819
            MKLRKPMIYGATSH ERTKIL+AFKTS+DVNT+FLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 540  MKLRKPMIYGATSHAERTKILQAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 599

Query: 1820 RRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 1999
            RRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS
Sbjct: 600  RRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 659

Query: 2000 FKVITSLPPADTGAELSYHRLDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXXXX 2179
            FKVITSLPP D+G +LSY+ LD+QLALL KVL+AGD+ VGLEQLEEDADDIAL K     
Sbjct: 660  FKVITSLPPLDSGPDLSYYHLDEQLALLAKVLNAGDDAVGLEQLEEDADDIALHKARRSM 719

Query: 2180 XXXXXXXXXNGRVYMEYSTGK-KLHGQ--MKSKPKDPAKRHHLFKKRFG 2317
                      G VYMEYSTG+ KL GQ  +KSKPKDPAKRH+LFK+R+G
Sbjct: 720  GSMSAMSGAKGMVYMEYSTGRNKLAGQGHIKSKPKDPAKRHYLFKRRYG 768


>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
          Length = 768

 Score = 1273 bits (3295), Expect = 0.0
 Identities = 645/768 (83%), Positives = 682/768 (88%), Gaps = 4/768 (0%)
 Frame = +2

Query: 23   MGNGDKNRPSKRIKFSKDEHRASTAEDYSSHFGEDLEDDPR--DGEGKKRDFSKLELKPD 196
            MG+GDK RP+K+ KF K++++ +  ED   +  +D +DD R  D EG KRDFSKLELKPD
Sbjct: 1    MGHGDKGRPNKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRYGDKEGGKRDFSKLELKPD 60

Query: 197  HMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 376
            H NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61   HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 377  LETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLLK 556
            LETETII+VL+KLSK KLPKEMIDFI+ ST NYGKVKLVLKKN+Y VESPFPEVL+ LLK
Sbjct: 121  LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180

Query: 557  DDVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXXIDPTQ 736
            D+VIGRAR+  E S G   FTV K+AGE+   H                      IDP+Q
Sbjct: 181  DEVIGRARVVHEDS-GNGEFTVSKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 239

Query: 737  VENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRAR 916
            VENVKQRCLPNALNYPMLEEYDFRND +NPDL++ELKP AQPRPYQEKSLSKMFGNGRAR
Sbjct: 240  VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 299

Query: 917  SGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEEQICRFTS 1096
            SGIIVLPCGAGKSLVGVSAA RIRKSCLCLATNAVSVDQWAFQFKLWSTI+++QICRFTS
Sbjct: 300  SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 359

Query: 1097 DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEIRNREWGLLLMDEVHVVPAQMFRK 1276
            DSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIEEIRNREWGLLLMDEVHVVPA MFRK
Sbjct: 360  DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 419

Query: 1277 VIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 1456
            VI+LTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 420  VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 479

Query: 1457 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 1636
            MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 480  MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 539

Query: 1637 AMKLRKPMIYGATSHPERTKILEAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAG 1816
            AMKLRKPMIYGATSH ERTKILEAFKTSRDVNT+FLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 540  AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 599

Query: 1817 SRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 1996
            SRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 600  SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 659

Query: 1997 SFKVITSLPPADTGAELSYHRLDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXXX 2176
            SFKVITSLPPAD GAELSYHRLDDQLALLGKVL+AGD+ VGLEQLE+DAD IAL      
Sbjct: 660  SFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDAARRS 719

Query: 2177 XXXXXXXXXXNGRVYMEYSTGKKL--HGQMKSKPKDPAKRHHLFKKRF 2314
                      NG VYMEYSTG+KL   GQ+KSKPKDPAKRHHLFKKRF
Sbjct: 720  KGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 767


>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
          Length = 767

 Score = 1253 bits (3243), Expect = 0.0
 Identities = 626/767 (81%), Positives = 678/767 (88%), Gaps = 3/767 (0%)
 Frame = +2

Query: 23   MGNGDKNRPSKRIKFS-KDEHRASTAEDYSSHFGEDLEDDPRDGEG--KKRDFSKLELKP 193
            MGNG++ RP+K++K+  KD+ +    ++   ++ +D ++D RDGEG  KKRDF+KLELKP
Sbjct: 1    MGNGERGRPNKKMKYGGKDDQKMKNIQNAEDYY-DDADEDSRDGEGEEKKRDFTKLELKP 59

Query: 194  DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 373
            DH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV
Sbjct: 60   DHGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 119

Query: 374  GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 553
            GLETETIISVLNKLSKTKLPKEMI+FIH STANYGKVKLVLKKN+YF+ESPFPEVLK LL
Sbjct: 120  GLETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLL 179

Query: 554  KDDVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXXIDPT 733
             DDVI RAR SSE   G DGF+VG+++GE+E                         IDP 
Sbjct: 180  SDDVINRARFSSEPYYGGDGFSVGRTSGELEAGPGELLNEAEFAAAAEEKETHSFEIDPA 239

Query: 734  QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 913
            QVENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRA
Sbjct: 240  QVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRA 299

Query: 914  RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEEQICRFT 1093
            RSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTI+++QICRFT
Sbjct: 300  RSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFT 359

Query: 1094 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEIRNREWGLLLMDEVHVVPAQMFR 1273
            SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIEE+RNREWGLLLMDEVHVVPA MFR
Sbjct: 360  SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFR 419

Query: 1274 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 1453
            KVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC
Sbjct: 420  KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 479

Query: 1454 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 1633
            PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE
Sbjct: 480  PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 539

Query: 1634 YAMKLRKPMIYGATSHPERTKILEAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHA 1813
            YAMKLRKPMIYGATSH ERTKILEAFKTS+DVNT+FLSKVGDNSIDIPEANVIIQISSHA
Sbjct: 540  YAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHA 599

Query: 1814 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 1993
            GSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG
Sbjct: 600  GSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 659

Query: 1994 YSFKVITSLPPADTGAELSYHRLDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 2173
            YSFKVITSLPP D G+ LSYH  ++QL+LLGKV++AGD+ VGLEQLEED D +ALQK   
Sbjct: 660  YSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARR 719

Query: 2174 XXXXXXXXXXXNGRVYMEYSTGKKLHGQMKSKPKDPAKRHHLFKKRF 2314
                        G VYMEY++G+   GQ   KPKDP KRH+LFKKR+
Sbjct: 720  SMGSMSVMSGSKGMVYMEYNSGRHKSGQQFKKPKDPTKRHNLFKKRY 766


>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
            gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
            repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
            AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog
            1; Short=AtXPB1; AltName: Full=XPB homolog 1
            gi|11771735|gb|AAC49987.2| putative DNA repair protein
            and transcription factor [Arabidopsis thaliana]
            gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
            thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
            [Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
            repair helicase XPB1 [Arabidopsis thaliana]
          Length = 767

 Score = 1253 bits (3242), Expect = 0.0
 Identities = 626/767 (81%), Positives = 677/767 (88%), Gaps = 3/767 (0%)
 Frame = +2

Query: 23   MGNGDKNRPSKRIKFS-KDEHRASTAEDYSSHFGEDLEDDPRDGEG--KKRDFSKLELKP 193
            MGNG++ RP+K++K+  KD+ +    ++   ++ +D ++D RDGEG  KKRDF+KLELKP
Sbjct: 1    MGNGERGRPNKKMKYGGKDDQKMKNIQNAEDYY-DDADEDSRDGEGEEKKRDFTKLELKP 59

Query: 194  DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 373
            DH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV
Sbjct: 60   DHGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 119

Query: 374  GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 553
            GLETETIISVLNKLSKTKLPKEMI+FIH STANYGKVKLVLKKN+YF+ESPFPEVLK LL
Sbjct: 120  GLETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLL 179

Query: 554  KDDVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXXIDPT 733
             DDVI RAR SSE   G DGF+VG++ GE+E                         IDP 
Sbjct: 180  SDDVINRARFSSEPYYGGDGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPA 239

Query: 734  QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 913
            QVENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRA
Sbjct: 240  QVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRA 299

Query: 914  RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEEQICRFT 1093
            RSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTI+++QICRFT
Sbjct: 300  RSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFT 359

Query: 1094 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEIRNREWGLLLMDEVHVVPAQMFR 1273
            SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIEE+RNREWGLLLMDEVHVVPA MFR
Sbjct: 360  SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFR 419

Query: 1274 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 1453
            KVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC
Sbjct: 420  KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 479

Query: 1454 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 1633
            PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE
Sbjct: 480  PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 539

Query: 1634 YAMKLRKPMIYGATSHPERTKILEAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHA 1813
            YAMKLRKPMIYGATSH ERTKILEAFKTS+DVNT+FLSKVGDNSIDIPEANVIIQISSHA
Sbjct: 540  YAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHA 599

Query: 1814 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 1993
            GSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG
Sbjct: 600  GSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 659

Query: 1994 YSFKVITSLPPADTGAELSYHRLDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 2173
            YSFKVITSLPP D G+ LSYH  ++QL+LLGKV++AGD+ VGLEQLEED D +ALQK   
Sbjct: 660  YSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARR 719

Query: 2174 XXXXXXXXXXXNGRVYMEYSTGKKLHGQMKSKPKDPAKRHHLFKKRF 2314
                        G VYMEY++G+   GQ   KPKDP KRH+LFKKR+
Sbjct: 720  SMGSMSVMSGSKGMVYMEYNSGRHKSGQQFKKPKDPTKRHNLFKKRY 766