BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00005870
         (1756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK29467.1| polyprotein-like [Solanum chilense]                    186   1e-44
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   185   3e-44
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...   162   3e-37
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...   162   3e-37
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]        159   2e-36

>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  186 bits (473), Expect = 1e-44
 Identities = 116/285 (40%), Positives = 167/285 (58%), Gaps = 21/285 (7%)
 Frame = +1

Query: 508  MKFDVEKFDGIIN-FGLWQVQVKDVLIQSGLHKALKGSPGAVKKPGADDDANIKSGMSDE 684
            +K++V KF+G    F +WQ ++KD+LIQ GLHKAL G     KKP           M  E
Sbjct: 4    VKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKS---KKP---------ESMKLE 51

Query: 685  DWEDLDLKAASTIRLCLAKNVLANVHGISSAKELWEKLEALYQAKGISNRLYLKEQFHTL 864
            DWE+LD KAAS IRL L  +V+ N+    SA  +W KLE LY +K ++N+LYLK+Q +TL
Sbjct: 52   DWEELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTL 111

Query: 865  RMDEGVKISDHLSILNGIISELESIGAKIEDEDKALRLILSLPRSYEHMKPILVYGKETL 1044
             MDEG     HL++LNG+I++L ++G KIE+EDK + L+ SLP SY+ +   +++GK+++
Sbjct: 112  HMDEGTNFLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYDTLSTTILHGKDSI 171

Query: 1045 VFAEVTGKLLLEERR------------LMSEGRTSSENSAMVAFS--RGRKK---DSKGV 1173
               +VT  LLL E+               S GR+   +S+    S  RG+ K    SK  
Sbjct: 172  QLKDVTSALLLNEKMRKKPENHGQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSKAR 231

Query: 1174 VCWRCGKPGHTKRNCPGGACQGGADSAE-SSEQTANIV--FDDVL 1299
             C+ C +PGH KR+CP      G  S + + + TA +V   DDV+
Sbjct: 232  NCYNCDQPGHFKRDCPNPKRGKGESSGQKNDDNTAAMVQNNDDVV 276


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  185 bits (470), Expect = 3e-44
 Identities = 104/270 (38%), Positives = 161/270 (59%), Gaps = 17/270 (6%)
 Frame = +1

Query: 508  MKFDVEKFDGIINFGLWQVQVKDVLIQSGLHKALKGSPGAVKKPGADDDANIKSGMSDED 687
            +K++V KF+G   F  WQ +++D+LIQ GLHK L            D D+     M  ED
Sbjct: 4    VKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVL------------DVDSKKPDTMKAED 51

Query: 688  WEDLDLKAASTIRLCLAKNVLANVHGISSAKELWEKLEALYQAKGISNRLYLKEQFHTLR 867
            W DLD +AAS IRL L+ +V+ N+    +A+ +W +LE+LY +K ++N+LYLK+Q + L 
Sbjct: 52   WADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALH 111

Query: 868  MDEGVKISDHLSILNGIISELESIGAKIEDEDKALRLILSLPRSYEHMKPILVYGKETLV 1047
            M EG     HL++ NG+I++L ++G KIE+EDKA+ L+ SLP SY+++   +++GK T+ 
Sbjct: 112  MSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIE 171

Query: 1048 FAEVTGKLLLEER----------RLMSEGR----TSSENSAMVAFSRGRKKD-SKGVV-- 1176
              +VT  LLL E+           L++EGR      S N+   + +RG+ K+ SK  V  
Sbjct: 172  LKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRN 231

Query: 1177 CWRCGKPGHTKRNCPGGACQGGADSAESSE 1266
            C+ C +PGH KR+CP      G  S + ++
Sbjct: 232  CYNCNQPGHFKRDCPNPRKGKGETSGQKND 261


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 424

 Score =  162 bits (409), Expect = 3e-37
 Identities = 87/248 (35%), Positives = 139/248 (56%), Gaps = 8/248 (3%)
 Frame = +1

Query: 502  VQMKFDVEKFDGIINFGLWQVQVKDVLIQSGLHKALKGSPGAVKKPGADDDANIKSGMSD 681
            V  KF+V KFDG  NF LWQ+++KD+L Q G+ KAL              +  +   M  
Sbjct: 5    VVSKFEVVKFDGTGNFVLWQMRLKDLLAQQGISKAL--------------EETMPEKMDA 50

Query: 682  EDWEDLDLKAASTIRLCLAKNVLANVHGISSAKELWEKLEALYQAKGISNRLYLKEQFHT 861
              WE++  +AA+TIRL L+ +V+  V    ++KE+W KL +LY +K ++++LYLK+Q + 
Sbjct: 51   GKWEEMKAQAAATIRLSLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYG 110

Query: 862  LRMDEGVKISDHLSILNGIISELESIGAKIEDEDKALRLILSLPRSYEHMKPILVYGKET 1041
            L+M E   +  H+ + N ++ +L  +  K++DEDKA+ L+ SLP SYEH+  IL +GK+T
Sbjct: 111  LQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSYEHVVTILTHGKDT 170

Query: 1042 LVFAEVTGKLLLEERRLMSEGRTSSENSAMVAFSRGR--------KKDSKGVVCWRCGKP 1197
             +  E+   LL  + R   +      + A     + +        K   KG  C++C + 
Sbjct: 171  -IKTEIISSLLARDLRRSKKNEAMEASQAESLLVKAKHDHEAGVSKSKEKGARCYKCHEF 229

Query: 1198 GHTKRNCP 1221
            GH +RNCP
Sbjct: 230  GHIRRNCP 237


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 425

 Score =  162 bits (409), Expect = 3e-37
 Identities = 93/277 (33%), Positives = 148/277 (53%), Gaps = 17/277 (6%)
 Frame = +1

Query: 502  VQMKFDVEKFDGIINFGLWQVQVKDVLIQSGLHKALKGSPGAVKKPGADDDANIKSGMSD 681
            V  KF+V KFDG  NF LWQ+++KD+L Q G+ KAL              +  +   M  
Sbjct: 5    VVSKFEVVKFDGTGNFILWQMRLKDLLAQQGISKAL--------------EETMPEKMDA 50

Query: 682  EDWEDLDLKAASTIRLCLAKNVLANVHGISSAKELWEKLEALYQAKGISNRLYLKEQFHT 861
              WE++  +AA+TIRL L+ +V+  V    + KE+W+KL +LY +K ++++LYLK+Q + 
Sbjct: 51   GKWEEMKAQAAATIRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYG 110

Query: 862  LRMDEGVKISDHLSILNGIISELESIGAKIEDEDKALRLILSLPRSYEHMKPILVYGKET 1041
            L+M E   +  H+ + N ++ +L  +  K++DED A+ L+ SLP SYEH+   L++GK+T
Sbjct: 111  LQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDMAIILLCSLPPSYEHVVTTLMHGKDT 170

Query: 1042 LVFAEVTGKLLLEERRLMSEGRTSSENSAMVAFSRGR--------KKDSKGVVCWRCGKP 1197
            +   E    LL  + R  ++      + A     + +        K   KG  C++C + 
Sbjct: 171  VKTEEKISSLLARDLRRSNKNEAMEASQAESLLVKAKHDHEAGVSKSKDKGARCYKCHEF 230

Query: 1198 GHTKRNCP------GGACQ---GGADSAESSEQTANI 1281
            GH +RNCP      GG       G DS  SS +T  +
Sbjct: 231  GHIRRNCPLLKKRKGGIASLAARGDDSDSSSHETLTV 267


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score =  159 bits (403), Expect = 2e-36
 Identities = 93/260 (35%), Positives = 141/260 (54%), Gaps = 5/260 (1%)
 Frame = +1

Query: 508  MKFDVEKFDGIINFGLWQVQVKDVLIQSGLHKALKGSPGAVKKPGADDDANIKSGMSDED 687
            MKFD+ KFDG  NFGLWQ +VKD+L Q  + KALKG      KP           M D+D
Sbjct: 88   MKFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGV-----KPAK---------MEDDD 133

Query: 688  WEDLDLKAASTIRLCLAKNVLANVHGISSAKELWEKLEALYQAKGISNRLYLKEQFHTLR 867
             E++ L+AA+TIR CL+  ++ +V   +S K +WEKLEA + +K ++N+ YLK++ + L+
Sbjct: 134  CEEMQLQAAATIRRCLSDQIMYHVMEETSPKIIWEKLEAQFMSKTLTNKRYLKQKLYGLK 193

Query: 868  MDEGVKISDHLSILNGIISELESIGAKIEDEDKALRLILSLPRSYEHMKPILVYGKETLV 1047
            M EG  ++ H+++ N ++++L  +  +++DEDKA+ L+ SLP SYEH+            
Sbjct: 194  MQEGADLTAHVNVFNQLVTDLVKMDVEVDDEDKAIVLLCSLPESYEHV------------ 241

Query: 1048 FAEVTGKLLLEERRLMSEGRTSSENSAMVAFSRG-----RKKDSKGVVCWRCGKPGHTKR 1212
                         R   EG TS     +V          + K  K V C+RC + GH +R
Sbjct: 242  ------------MRKNKEGETSQAEGLLVKEDHAGHKVKKNKKKKMVKCFRCDEWGHIRR 289

Query: 1213 NCPGGACQGGADSAESSEQT 1272
             CP    +  A+ A SS  +
Sbjct: 290  ECPTLKGKAKANVATSSNDS 309