BLASTX nr result

ID: Salvia21_contig00005765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00005765
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272014.2| PREDICTED: transcription elongation regulato...   169   5e-40
ref|XP_003538973.1| PREDICTED: transcription elongation regulato...   162   3e-38
ref|XP_003538971.1| PREDICTED: transcription elongation regulato...   162   3e-38
ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative ...   161   8e-38
ref|XP_003540642.1| PREDICTED: transcription elongation regulato...   160   1e-37

>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis vinifera]
            gi|297738259|emb|CBI27460.3| unnamed protein product
            [Vitis vinifera]
          Length = 1046

 Score =  169 bits (427), Expect = 5e-40
 Identities = 98/211 (46%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
 Frame = +2

Query: 5    ALQAPSVSVTITNIITEKGSDLVSLSTPAANTGGRDXXXXXXXXXXXXXXXLDLIKKKLQ 184
            AL+  ++    TN+ TEKG   ++LS PA  TGGRD               LD+IKKKLQ
Sbjct: 516  ALKEHAMLAPNTNVSTEKGPSPIALSAPAVTTGGRDATPLRTSAVPGSASALDMIKKKLQ 575

Query: 185  XXXXXXXXXXXXXXXXXXLELNGSKPMEATTKSLQNDN-----KDKNRXXXXXXXXXXXX 349
                               ELNGS+ +E T K LQ++N     KD N             
Sbjct: 576  DSGAPATSSPVHSSGPIASELNGSRVIEPTVKGLQSENSKDKLKDTNGDGNMSDSSSDSE 635

Query: 350  XXXXXPTMEDCLVQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPDQSTRRALFEHYV 529
                 PT E+C++QFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIP  S RR+LFEHYV
Sbjct: 636  DVDSGPTKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPGYSARRSLFEHYV 695

Query: 530  RTXXXXXXXXXXXXXXXXXXGFKQLLEEAKE 622
            RT                  GFKQLLEEA E
Sbjct: 696  RTRAEEERKEKRAAQRAAIEGFKQLLEEASE 726


>ref|XP_003538973.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 857

 Score =  162 bits (411), Expect = 3e-38
 Identities = 94/206 (45%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
 Frame = +2

Query: 23  VSVTITNIITEKGSDLVSLSTPAANTGGRDXXXXXXXXXXXXXXXLDLIKKKLQXXXXXX 202
           +SV+ TN+++++GS +V+L+ PA NTGGRD               LDLIKKKLQ      
Sbjct: 332 MSVSNTNVLSDRGSGMVTLNAPAINTGGRDAAALKPSSLQNSPSALDLIKKKLQDSGTPV 391

Query: 203 XXXXXXXXXXXX-LELNGSKPMEATTKSLQNDN-----KDKNRXXXXXXXXXXXXXXXXX 364
                         E NGSK +++T K LQ DN     KD N                  
Sbjct: 392 ASSSIPAPSVQTGPESNGSKTVDSTAKGLQVDNNKDKAKDTNGDANVSDTSSDSEDEDNG 451

Query: 365 PTMEDCLVQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPDQSTRRALFEHYVRTXXX 544
           P+ E+C++QFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIP  S RR+LFEHYV+T   
Sbjct: 452 PSKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAE 511

Query: 545 XXXXXXXXXXXXXXXGFKQLLEEAKE 622
                          GFK+LL+EA E
Sbjct: 512 EERKEKRAALKAAIEGFKRLLDEASE 537


>ref|XP_003538971.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 1007

 Score =  162 bits (411), Expect = 3e-38
 Identities = 94/206 (45%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
 Frame = +2

Query: 23   VSVTITNIITEKGSDLVSLSTPAANTGGRDXXXXXXXXXXXXXXXLDLIKKKLQXXXXXX 202
            +SV+ TN+++++GS +V+L+ PA NTGGRD               LDLIKKKLQ      
Sbjct: 482  MSVSNTNVLSDRGSGMVTLNAPAINTGGRDAAALKPSSLQNSPSALDLIKKKLQDSGTPV 541

Query: 203  XXXXXXXXXXXX-LELNGSKPMEATTKSLQNDN-----KDKNRXXXXXXXXXXXXXXXXX 364
                          E NGSK +++T K LQ DN     KD N                  
Sbjct: 542  ASSSIPAPSVQTGPESNGSKTVDSTAKGLQVDNNKDKAKDTNGDANVSDTSSDSEDEDNG 601

Query: 365  PTMEDCLVQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPDQSTRRALFEHYVRTXXX 544
            P+ E+C++QFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIP  S RR+LFEHYV+T   
Sbjct: 602  PSKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAE 661

Query: 545  XXXXXXXXXXXXXXXGFKQLLEEAKE 622
                           GFK+LL+EA E
Sbjct: 662  EERKEKRAAQKAAIEGFKRLLDEASE 687


>ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative [Ricinus communis]
           gi|223545064|gb|EEF46576.1| Pre-mRNA-processing protein
           PRP40, putative [Ricinus communis]
          Length = 886

 Score =  161 bits (408), Expect = 8e-38
 Identities = 94/211 (44%), Positives = 115/211 (54%), Gaps = 6/211 (2%)
 Frame = +2

Query: 8   LQAPSVSVTITNIITEKGSDLVSLSTPAANTGGRDXXXXXXXXXXXXXXXLDLIKKKLQX 187
           L+   +SV+ ++++ EKGS  +SLS PA NTGGRD               LDLIKKKLQ 
Sbjct: 355 LKEQEMSVSSSSVLNEKGSVQISLSAPAINTGGRDATALRASNALGASSALDLIKKKLQD 414

Query: 188 XXXXXXXXXXXXXXXXXL-ELNGSKPMEATTKSLQNDN-----KDKNRXXXXXXXXXXXX 349
                              E NGS+ MEAT+K L ++N     KD N             
Sbjct: 415 SGTPVTSSPAPVSLGITTPESNGSRAMEATSKGLPSENSKEKLKDANGDANASDSSSDSE 474

Query: 350 XXXXXPTMEDCLVQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPDQSTRRALFEHYV 529
                PT E+C++QFK+MLKERG+APFSKWEK LPKIVFDPRF+AIP  S RR+LFEHYV
Sbjct: 475 EEDNGPTKEECIIQFKDMLKERGIAPFSKWEKVLPKIVFDPRFQAIPSHSARRSLFEHYV 534

Query: 530 RTXXXXXXXXXXXXXXXXXXGFKQLLEEAKE 622
           +T                  GF+QLLEEA E
Sbjct: 535 KTRAEEERKEKRAAQKAAIEGFRQLLEEASE 565


>ref|XP_003540642.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 930

 Score =  160 bits (406), Expect = 1e-37
 Identities = 93/206 (45%), Positives = 114/206 (55%), Gaps = 6/206 (2%)
 Frame = +2

Query: 23   VSVTITNIITEKGSDLVSLSTPAANTGGRDXXXXXXXXXXXXXXXLDLIKKKLQXXXXXX 202
            +SV  TN+++++GS +V+L+ PA NTGGRD               LDLIKKKLQ      
Sbjct: 405  MSVPNTNVLSDRGSGMVTLNAPAINTGGRDAAALKPSTLQNSSSALDLIKKKLQDSGTPI 464

Query: 203  XXXXXXXXXXXX-LELNGSKPMEATTKSLQNDN-----KDKNRXXXXXXXXXXXXXXXXX 364
                          E NGSK +++T K +Q DN     KD N                  
Sbjct: 465  TPSSIHAPSVQIGPESNGSKTVDSTAKGVQVDNNKDKQKDTNGDADVSDTSSDSEDEDNG 524

Query: 365  PTMEDCLVQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPDQSTRRALFEHYVRTXXX 544
            P+ E+C++QFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIP  S RR+LFEHYV+T   
Sbjct: 525  PSKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAE 584

Query: 545  XXXXXXXXXXXXXXXGFKQLLEEAKE 622
                           GFK+LL+EA E
Sbjct: 585  EERKEKRAAQKAAIEGFKRLLDEASE 610


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