BLASTX nr result
ID: Salvia21_contig00005467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00005467
(4100 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 1766 0.0
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 1766 0.0
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 1763 0.0
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 1761 0.0
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 1756 0.0
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 1766 bits (4575), Expect = 0.0
Identities = 863/1198 (72%), Positives = 1008/1198 (84%), Gaps = 3/1198 (0%)
Frame = -1
Query: 3863 MGQVG-DNDMIVTQISVGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSSTPQDSYPNYEI 3687
MG G + D++VTQISVGG + V AK+LS+YLE+ VG VWRCR+K SSTP DSYP +++
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60
Query: 3686 DTENVQRKGEYEKVEPHAFVHFAVAQSSASAMKLSGAGDLVLGRHILKVGLGPQNPYRLR 3507
D E VQR +YEKV PHAFVHFA ++S+ A+ +G +L+LG+ L V LGP+NPYRL
Sbjct: 61 DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 3506 ERRRTTTPYKVPGVTVEIGAMKSRDEFVVGWRGPRTGLDFLVDPFNGTCQILFTKDTAFS 3327
+RRRTT P+K V++E+G + S+D+FVVGWRGPRTG+DFLVDPFNG C+ILFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180
Query: 3326 IKGEARPAVIKCNFKMEFVPREINQIKRYKDFSSVVVLFQLASSPLLYYRTADDDIEESV 3147
+GEAR A+IKCNFK+EF+ REIN+IK+ KDF+S+V+L QLASSPL++YRTADDDIEESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 3146 PFDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRHLSQLEKALGYLQNRRVPVENGSP 2967
FDLLDDDD WIRTTD SGAIGR NTYRIS+RPR+ EKA+ Y RVP+
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 2966 QERLRVQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQTSKQFFDLLR 2787
++ LRV+DEPDFGV M+DPFFCFQ EG++FKVMF+VNAV+HKGI+NQHQ + +FF LLR
Sbjct: 301 RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 2786 SQPEELNLVALKHIYSYKRPVYDAYRALDSVTKWLIKNPKLLQRPDQMDDIVEVRRLVIT 2607
S EE+NL ALKH++SYK PV DA + L + KWL+KNPKLL+R ++DDIVEVRRLVIT
Sbjct: 360 SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 2606 PSKAYCLPPEVELSNRVLRNYKNISDRFLRVTFMDEAMQTLNKNVLTYYAAPIVREITSN 2427
P+KAYCLPP VELSNRVLRNYK+++DRFLRVTFMDE M+ LN+NVLTYYAA IVREITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 2426 LNPQRTTMFKRVRDILYQGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRKTSVVCIKTWM 2247
NPQRT +F+RV+ IL +GF+LCGR+YSFLAFS+NQLRDRSAWFFAED K V I +WM
Sbjct: 480 SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 2246 GKFTNRNVAKCAARMGQCFSSTYATVEVPSAQANSK-SDVERNGYIFSDGIGMISADLAK 2070
G+F+NRNVAKCAARMGQCFSSTYATVEVPS++ NS+ D+ERNGY+FSDGIGMISADLA
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAV 599
Query: 2069 EVAEKLQLRTKLPCAYQIRYAGYKGVVACWPAENNGHRLQLRPSMKKFDSDHTTLEICSW 1890
EVAEKL L P AYQIRYAG KGVVACWP +N+G RL LRPSMKKFDS+HT LEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 1889 TRFQPGFLNRQIVTLLSSLEVCDENFWRMQELMIARLDGILEDPDMAFDVLTASCSDQGN 1710
TRFQPGFLNRQIVTLLSSL+V D FW MQ+ MI+ LD +L D D+AFDV+TASC++ GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 1709 TAAMMLAAGFRSHTEPHLRGMLMSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYG 1530
TAA+ML+AGF+ +EPHLRGML SIR SQLGDLR K+RIFV SGRWLMGCLDELG LE G
Sbjct: 720 TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 1529 QCFIQVSKPSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGL 1350
QCFIQVS PSLE+CF HG +FS+ KK+L+V+KGLVVIAKNPCLHPGDVRILEAVDV GL
Sbjct: 780 QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839
Query: 1349 HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLK 1170
HHLYDCLVFPQKG+RPH+NEASGSDLDGDLYFVTWD+ LIPPSK+SW+PM+YEP EVK
Sbjct: 840 HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQM 899
Query: 1169 PREVTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPK 990
R+V H DII+FF+KNMV ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 989 TGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQL-TYPA 813
TGK+VTMP DLKP+MYPDFMGKEE QSYKS KILGKLYR+V+D + + E S+ L P
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019
Query: 812 DISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMPKFSSK 633
DI YD LE+ GS FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK+S+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 632 KQGELKERLKHAYNALRKDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTYQDNWV 453
KQGELKERLKHAYN LRK++R VFE M P FD LPD EKN +YE+KASAWYQVTY +WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 452 KKSKELQELDDSGKTVLLSFAWIAADYLARIKIRRRRMENAISSKPIDSLGRYLADKI 279
+S ELQ D TV+LSFAWIAADYLARIKIR R ++ + S+KPI+SLGRYL D I
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197
>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 1766 bits (4574), Expect = 0.0
Identities = 865/1198 (72%), Positives = 1009/1198 (84%), Gaps = 3/1198 (0%)
Frame = -1
Query: 3863 MGQVG-DNDMIVTQISVGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSSTPQDSYPNYEI 3687
MG G + D++VTQISVGG + V AK+LS+YLE+ VG VWRCR+K S+TP DSYP Y+I
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60
Query: 3686 DTENVQRKGEYEKVEPHAFVHFAVAQSSASAMKLSGAGDLVLGRHILKVGLGPQNPYRLR 3507
D E V R +YEKV PHAFVHFA ++S+ A+ +G +L+LG+ L V LGP+NPYRL
Sbjct: 61 DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 3506 ERRRTTTPYKVPGVTVEIGAMKSRDEFVVGWRGPRTGLDFLVDPFNGTCQILFTKDTAFS 3327
+RRRTT P+K V+VE+G + S+D+FVVGWRGPRTG+DFLVDPFNGTC+ILFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFS 180
Query: 3326 IKGEARPAVIKCNFKMEFVPREINQIKRYKDFSSVVVLFQLASSPLLYYRTADDDIEESV 3147
+GEAR A+IKCNFK+EF+ REIN+IK+ KDF+S+V+LFQLASSPL++YRTADDDIEESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESV 240
Query: 3146 PFDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRHLSQLEKALGYLQNRRVPVENGSP 2967
FDLLDDDD WIRTTD SGAIGR NTYRIS+RPR+ EKA+ Y RRVP+
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300
Query: 2966 QERLRVQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQTSKQFFDLLR 2787
++ LRV+DEPDFGV M+DPFFCFQ EG++FKVMF+VNAV+HKGI+NQHQ + +FF LLR
Sbjct: 301 RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 2786 SQPEELNLVALKHIYSYKRPVYDAYRALDSVTKWLIKNPKLLQRPDQMDDIVEVRRLVIT 2607
S+ EE+NL ALKH++SYK PV DA + L + KWL+KNPKLL+R ++DDIVEVRRLVIT
Sbjct: 360 SRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 2606 PSKAYCLPPEVELSNRVLRNYKNISDRFLRVTFMDEAMQTLNKNVLTYYAAPIVREITSN 2427
P+KAYCLPP VELSNRVLRNYK+++DRFLRVTFMDE M+ LN+NVLTYYAA IVREITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 2426 LNPQRTTMFKRVRDILYQGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRKTSVVCIKTWM 2247
NPQRT +F+RV+ IL +GF+LCGR+YSFLAFS+NQLRDRSAWFFAED K V I +WM
Sbjct: 480 SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 2246 GKFTNRNVAKCAARMGQCFSSTYATVEVPSAQANSK-SDVERNGYIFSDGIGMISADLAK 2070
G+F+NRNVAKCAARMGQCFSSTYATVEVPS++ NS+ D+ERNGY+FSDGIGMISADLA
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2069 EVAEKLQLRTKLPCAYQIRYAGYKGVVACWPAENNGHRLQLRPSMKKFDSDHTTLEICSW 1890
EVAEKL L P AYQIRYAGYKGVVACWP +N+G L LRPSMKKFDS+HT LEICSW
Sbjct: 600 EVAEKLHLNVNPPSAYQIRYAGYKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSW 659
Query: 1889 TRFQPGFLNRQIVTLLSSLEVCDENFWRMQELMIARLDGILEDPDMAFDVLTASCSDQGN 1710
TRFQPGFLNRQIVTLLSSL+V D FW MQ+ MI+ LD +L D D+AFDV+TASC++ GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 1709 TAAMMLAAGFRSHTEPHLRGMLMSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYG 1530
TAA+ML+AGF+ +EPHLRGML SIR SQLGDLR K+RIFV SGRWLMGCLDELG LE G
Sbjct: 720 TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 1529 QCFIQVSKPSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGL 1350
QCFIQVS PSLE+CF HG +FS+ KK+L+V+KGLVVIAKNPCLHPGDVRILEAVDV L
Sbjct: 780 QCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839
Query: 1349 HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLK 1170
HLYDCLVFPQKG+RPH+NEASGSDLDGDLYFVTWD+ LIPPSK+SW+PM+YEP EVK
Sbjct: 840 SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 1169 PREVTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPK 990
R+V H DII+FF+KNMV ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 989 TGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQL-TYPA 813
TGK+VTMP DLKP+MYPDFMGKEE QSYKS KILGKLYR+V+D + + E S+ L P
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019
Query: 812 DISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMPKFSSK 633
DI YD L + GS FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK+S+K
Sbjct: 1020 DIPYDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 632 KQGELKERLKHAYNALRKDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTYQDNWV 453
KQGELKERLKHAYN LRK++R VFE M P FD LPD EKN +YE+KASAWYQVTY +WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 452 KKSKELQELDDSGKTVLLSFAWIAADYLARIKIRRRRMENAISSKPIDSLGRYLADKI 279
+S ELQ D TV+LSFAWIAADYLARIKIR R ++ + S+KPI+SLGRYL DKI
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 1763 bits (4566), Expect = 0.0
Identities = 862/1198 (71%), Positives = 1007/1198 (84%), Gaps = 3/1198 (0%)
Frame = -1
Query: 3863 MGQVG-DNDMIVTQISVGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSSTPQDSYPNYEI 3687
MG G + +++VTQISVGG + V AK+LS+YLE+ VG VWRCR+K SSTP DSYP Y+I
Sbjct: 1 MGSEGCEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60
Query: 3686 DTENVQRKGEYEKVEPHAFVHFAVAQSSASAMKLSGAGDLVLGRHILKVGLGPQNPYRLR 3507
D E VQR YEKV PHAFVHFA ++S+ A+ +G +L+LG+ L V LGP+NPYRL
Sbjct: 61 DAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 3506 ERRRTTTPYKVPGVTVEIGAMKSRDEFVVGWRGPRTGLDFLVDPFNGTCQILFTKDTAFS 3327
+RRRTT P+K V+VE+G + S+D+FVVGWRGPRTG+DFLVDPFNGTC+ILFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFS 180
Query: 3326 IKGEARPAVIKCNFKMEFVPREINQIKRYKDFSSVVVLFQLASSPLLYYRTADDDIEESV 3147
+GEAR A+IKCNFK+EF+ REIN+IK+ KDF+S+V+LFQLASSPL++YRTADDDIEESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESV 240
Query: 3146 PFDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRHLSQLEKALGYLQNRRVPVENGSP 2967
FDLLDDDD WIRTTD SGAIGR NTYRIS+RPR+ EKA+ Y RRVP+
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300
Query: 2966 QERLRVQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQTSKQFFDLLR 2787
++ LRV+DEPDFGV M+DPFFCFQ EG++F+V+F+VNAV+HKGI+NQHQ + +FF LLR
Sbjct: 301 RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFRVLFLVNAVLHKGIVNQHQMANEFFYLLR 359
Query: 2786 SQPEELNLVALKHIYSYKRPVYDAYRALDSVTKWLIKNPKLLQRPDQMDDIVEVRRLVIT 2607
S EE+N ALKH++SYK PV DA + L + KWL+KNPKLL R ++DDIVEVRRLVIT
Sbjct: 360 SHQEEVNSAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLDRTGELDDIVEVRRLVIT 419
Query: 2606 PSKAYCLPPEVELSNRVLRNYKNISDRFLRVTFMDEAMQTLNKNVLTYYAAPIVREITSN 2427
P+KAYCLPP VELSNRVLRNYK+++DRFLRVTFMDE M+ LN+NVLTYYAA IVREITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 2426 LNPQRTTMFKRVRDILYQGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRKTSVVCIKTWM 2247
NPQRT +F+RV+ IL +GF+LCGR+YSFLAFS+NQLRDRSAWFFAED K V I +WM
Sbjct: 480 SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 2246 GKFTNRNVAKCAARMGQCFSSTYATVEVPSAQANSK-SDVERNGYIFSDGIGMISADLAK 2070
G+F+NRNVAKCAARMGQCFSSTYATVEVPS++ NS+ D+ERNGY+FSDGIGMISADLA
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2069 EVAEKLQLRTKLPCAYQIRYAGYKGVVACWPAENNGHRLQLRPSMKKFDSDHTTLEICSW 1890
EVAEKL L P AYQIRYAG KGVVACWP +N+G RL LRPSMKKFDS+HT LEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 1889 TRFQPGFLNRQIVTLLSSLEVCDENFWRMQELMIARLDGILEDPDMAFDVLTASCSDQGN 1710
TRFQPGFLNRQIVTLLSSL+V D FW MQ+ MI+ LD +L D D+AFDV+TASC++ GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 1709 TAAMMLAAGFRSHTEPHLRGMLMSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYG 1530
TAA+ML+AGF+ +EPHLRGML SIR SQLGDLR K+RIFV SGRWLMGCLDELG LE G
Sbjct: 720 TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 1529 QCFIQVSKPSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGL 1350
QCFIQVS PSLE+CF HG +FS+ KK+L+V+KGLVVIAKNPCLHPGDVRILEAVDV L
Sbjct: 780 QCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839
Query: 1349 HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLK 1170
HLYDCLVFPQKG+RPH+NEASGSDLDGDLYFVTWD+ LIPPSK+SW+PM+YEP EVK
Sbjct: 840 SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 1169 PREVTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPK 990
R+V H DII+FF+KNMV ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 989 TGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQL-TYPA 813
TGK+VTMP DLKP+MYPDFMGKEE QSYKS KILGKLYR+V+D + + E S+ L P
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019
Query: 812 DISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMPKFSSK 633
DI YD LE+ GS FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTG+IWSMPK+++K
Sbjct: 1020 DIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAK 1079
Query: 632 KQGELKERLKHAYNALRKDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTYQDNWV 453
KQGELKERLKHAYN LRK++R VFE M P FD LPD EKN +YE+KASAWYQVTY +WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139
Query: 452 KKSKELQELDDSGKTVLLSFAWIAADYLARIKIRRRRMENAISSKPIDSLGRYLADKI 279
+S ELQ D TV+LSFAWIAADYLARIKIR RR++ + S+KPI+SLGRYL D I
Sbjct: 1140 ARSLELQLADAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 1761 bits (4560), Expect = 0.0
Identities = 864/1198 (72%), Positives = 1003/1198 (83%), Gaps = 3/1198 (0%)
Frame = -1
Query: 3863 MGQVG-DNDMIVTQISVGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSSTPQDSYPNYEI 3687
MG G + +++VTQISVGG + V AK+LS+YLE+ VG VWRCR+K SSTP DSYP Y+I
Sbjct: 1 MGSEGSEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60
Query: 3686 DTENVQRKGEYEKVEPHAFVHFAVAQSSASAMKLSGAGDLVLGRHILKVGLGPQNPYRLR 3507
D E VQR YEKV PHAFVHFA ++S+ A+ +G +LVLG+ L V LGP+NPYRL
Sbjct: 61 DAERVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELVLGKKPLIVSLGPENPYRLN 120
Query: 3506 ERRRTTTPYKVPGVTVEIGAMKSRDEFVVGWRGPRTGLDFLVDPFNGTCQILFTKDTAFS 3327
+RRRTT P+K V+VE+G + S+ +FVVGWRGPRTG+DFLVDPFNGTC+ILFTKDT FS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTVFS 180
Query: 3326 IKGEARPAVIKCNFKMEFVPREINQIKRYKDFSSVVVLFQLASSPLLYYRTADDDIEESV 3147
+GEAR A+IKCNFK+EF+ REIN+IK+ KDF S+V+L QLASSPL++YRTADDDIEESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 3146 PFDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRHLSQLEKALGYLQNRRVPVENGSP 2967
FDLLDDDD WIRTTD SGAIGR NTYRIS+RPR+ EKA+ Y RVP+
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 2966 QERLRVQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQTSKQFFDLLR 2787
++ LRV+DEPDFGV M+DPFFCFQ EG++FKV+F+ NAV+HKGI+NQHQ +FF LLR
Sbjct: 301 RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVLFLANAVLHKGIVNQHQMINEFFYLLR 359
Query: 2786 SQPEELNLVALKHIYSYKRPVYDAYRALDSVTKWLIKNPKLLQRPDQMDDIVEVRRLVIT 2607
S EE+NL ALKH++SYK PV DA + L + KWL+KNPKLL+R ++DDIVEVRRLVIT
Sbjct: 360 SHQEEVNLAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 2606 PSKAYCLPPEVELSNRVLRNYKNISDRFLRVTFMDEAMQTLNKNVLTYYAAPIVREITSN 2427
P+KAYCLPP VELSNRVLRNYK+++DRFLRVTFMDE M+ LN+NVLTYYAA IVREITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 2426 LNPQRTTMFKRVRDILYQGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRKTSVVCIKTWM 2247
NPQRT +F+RV+ IL +GF+LCGR+YSFLAFS+NQLRDRSAWFFAED K V I +WM
Sbjct: 480 SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 2246 GKFTNRNVAKCAARMGQCFSSTYATVEVPSAQANSK-SDVERNGYIFSDGIGMISADLAK 2070
G+F+NRNVAKCAARMGQCFSSTYATVEVPS++ NS+ D+ERNGY+FSDGIGMISADLA
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2069 EVAEKLQLRTKLPCAYQIRYAGYKGVVACWPAENNGHRLQLRPSMKKFDSDHTTLEICSW 1890
EVAEKL L P AYQIRYAG KGVVACWP +N+G RL LRPSMKKFDS+HT LEICSW
Sbjct: 600 EVAEKLHLSVNPPAAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 1889 TRFQPGFLNRQIVTLLSSLEVCDENFWRMQELMIARLDGILEDPDMAFDVLTASCSDQGN 1710
TRFQPGFLNRQIVTLLSSL+V D FW MQ+ MIA LD +L D D+AFDV+TASC++ GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 1709 TAAMMLAAGFRSHTEPHLRGMLMSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYG 1530
TAA+ML+AGF+ +EPHLRGML SIR SQLGDLR K+RIFV SGRWLMGCLDELG LE G
Sbjct: 720 TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 1529 QCFIQVSKPSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGL 1350
QCFIQVS PSLE+CF HGS+FS+ KK+L+V+KGLVVIAKNPCLHPGDVRILEAVDV L
Sbjct: 780 QCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839
Query: 1349 HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLK 1170
HLYDCLVFPQKG+RPH+NEASGSDLDGDLYFVTWD+ +IPPSK+SW+PM+YEP EVK
Sbjct: 840 SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQL 899
Query: 1169 PREVTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPK 990
R+V H DII+FF+KNMV ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 989 TGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQL-TYPA 813
TGK+VTMP DLKP+MYPDFMGKEE QSYKS KILGKLYR+V+D + + E S+ L P
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019
Query: 812 DISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMPKFSSK 633
DI YD LE+ GS FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK+S+K
Sbjct: 1020 DIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 632 KQGELKERLKHAYNALRKDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTYQDNWV 453
KQGELKERLKHAYN LRK++R VFE M P FD LPD EKN +YE+KASAWYQVTY +WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139
Query: 452 KKSKELQELDDSGKTVLLSFAWIAADYLARIKIRRRRMENAISSKPIDSLGRYLADKI 279
+S ELQ D TV+LSFAWIAADYLARIKIR R + + S+KPI+SLGRYLADKI
Sbjct: 1140 ARSLELQIPDAVSSTVMLSFAWIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197
>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 1756 bits (4549), Expect = 0.0
Identities = 861/1198 (71%), Positives = 1003/1198 (83%), Gaps = 3/1198 (0%)
Frame = -1
Query: 3863 MGQVG-DNDMIVTQISVGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSSTPQDSYPNYEI 3687
MG G + +++VTQIS GG + V AK+LS+YLE+ VG VWRCR+K SSTP DSYP Y+I
Sbjct: 1 MGSEGSEKELVVTQISGGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60
Query: 3686 DTENVQRKGEYEKVEPHAFVHFAVAQSSASAMKLSGAGDLVLGRHILKVGLGPQNPYRLR 3507
D E VQR YEKV PHAFVHFA ++S+ A+ +G +L+LG+ L V LGP+NPYRL
Sbjct: 61 DAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 3506 ERRRTTTPYKVPGVTVEIGAMKSRDEFVVGWRGPRTGLDFLVDPFNGTCQILFTKDTAFS 3327
+RRRTT P+K V+VE+G + S+D+FVVGWRGPRTG+DF VDPFNGTC+ILFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDTAFS 180
Query: 3326 IKGEARPAVIKCNFKMEFVPREINQIKRYKDFSSVVVLFQLASSPLLYYRTADDDIEESV 3147
+GEAR A+IKCNFK+EF+ REIN+IK+ KDF+S+V+L QLASSPL++YRTADDDIEESV
Sbjct: 181 FRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 3146 PFDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRHLSQLEKALGYLQNRRVPVENGSP 2967
FDLLDDDD WIRTTD SGAIGR NTYRIS+RPR+ EKA+ Y RVP+
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 2966 QERLRVQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQTSKQFFDLLR 2787
++ LRV+DEPDFGV M+DPFFCFQ EG++FKVMF+VNAV+HKGI+NQHQ + +FF LLR
Sbjct: 301 RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 2786 SQPEELNLVALKHIYSYKRPVYDAYRALDSVTKWLIKNPKLLQRPDQMDDIVEVRRLVIT 2607
S+ EE+N ALKH++SYK PV DA + L + KWL+KNPKLL R ++DDIVEVRRLVIT
Sbjct: 360 SRQEEVNSAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLDRTGELDDIVEVRRLVIT 419
Query: 2606 PSKAYCLPPEVELSNRVLRNYKNISDRFLRVTFMDEAMQTLNKNVLTYYAAPIVREITSN 2427
P+KAYCLPP VELSNRVLRNYK+++DRFLRVTFMDE M+ LN+NVLTYYAA IVREITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 2426 LNPQRTTMFKRVRDILYQGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRKTSVVCIKTWM 2247
NPQRT +F+RV+ IL +GF+LCGR+YSFLAFS+NQLRDRSAWFFAED K V I +WM
Sbjct: 480 SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 2246 GKFTNRNVAKCAARMGQCFSSTYATVEVPSAQANSK-SDVERNGYIFSDGIGMISADLAK 2070
G+F+NRNVAKCAARMGQCFSSTYATVEVPS + NS+ D+ERNGY+FSDGIGMISADLA
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2069 EVAEKLQLRTKLPCAYQIRYAGYKGVVACWPAENNGHRLQLRPSMKKFDSDHTTLEICSW 1890
EVAEKL L P AYQIRYAG KGVVACWP +N+G RL LRPSMKKFDS+HT LEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 1889 TRFQPGFLNRQIVTLLSSLEVCDENFWRMQELMIARLDGILEDPDMAFDVLTASCSDQGN 1710
TRFQPGFLNRQIVTLLSSL+V D FW MQ+ MI+ LD +L D D+AFDV+TASC++ GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 1709 TAAMMLAAGFRSHTEPHLRGMLMSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYG 1530
TAA+ML+AGF+ +EPHLRGML SIR SQLGDLR K+RIFV SGRWLMGCLDELG LE G
Sbjct: 720 TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 1529 QCFIQVSKPSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGL 1350
QCFIQVS PSLE+CF HG +FS+ K++L+V+KGLVVIAKNPCLHPGDVRILEAVDV L
Sbjct: 780 QCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839
Query: 1349 HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLK 1170
HLYDCLVFPQKG+RPH+NEASGSDLDGDLYFVTWD+ LIPPSK+SW+PM+YEP EVK
Sbjct: 840 SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 1169 PREVTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPK 990
R+V H DII+FF+KNMV ESLG ICNAHVVHADLSE+GALDEKC+KLAELAA+AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 989 TGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQL-TYPA 813
TGK+VTMP DLKP+MYPDFMGKEE QSYKS KILGKLYR+V+D + + E S+ L P
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019
Query: 812 DISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMPKFSSK 633
DI YD LE+ GS FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK+S+K
Sbjct: 1020 DIPYDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 632 KQGELKERLKHAYNALRKDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTYQDNWV 453
KQGELKERLKHAYN LRK++R VFE M P FD LPD EKN +YE+KASAWYQVTY +WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139
Query: 452 KKSKELQELDDSGKTVLLSFAWIAADYLARIKIRRRRMENAISSKPIDSLGRYLADKI 279
+S ELQ D TV+LSFAWIAADYLARIKIR RR++ + S+KPI+SLGRYL D I
Sbjct: 1140 ARSLELQLPDAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197