BLASTX nr result

ID: Salvia21_contig00005208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00005208
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [...   142   2e-31
ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [...   142   2e-31
ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...   137   6e-30
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   137   8e-30
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...   137   8e-30

>ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  142 bits (359), Expect = 2e-31
 Identities = 77/157 (49%), Positives = 89/157 (56%)
 Frame = +3

Query: 3    TTDLKYYESRLNLNWRQILKTITDNPEQFIEDGGWEFLNLEAXXXXXXXXXXXXXGYVPX 182
            TTD+KYYESRLNLNWRQILKTITD+P+ FIE GGWEFLNLEA             GY P 
Sbjct: 916  TTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEPS 975

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTWDELEREASNADKEKGNES 362
                                                  GKTW+ELEREASNAD+EKGNES
Sbjct: 976  DVEPESDSEDEASDSESLVESEDDDDDEDSEEDSEEEKGKTWEELEREASNADREKGNES 1035

Query: 363  DSEDDRKRRKMKAFGKSXXXXXXXXXXXTLPKKARFR 473
            DSE+DRKRRK K+FGKS           ++PK+++ R
Sbjct: 1036 DSEEDRKRRKAKSFGKS----RGASLSSSMPKRSKLR 1068


>ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  142 bits (358), Expect = 2e-31
 Identities = 77/157 (49%), Positives = 88/157 (56%)
 Frame = +3

Query: 3    TTDLKYYESRLNLNWRQILKTITDNPEQFIEDGGWEFLNLEAXXXXXXXXXXXXXGYVPX 182
            TTD+KYYESRLNLNWRQILKTITD+P+ FIE GGWEFLNLEA             GY P 
Sbjct: 916  TTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEPS 975

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTWDELEREASNADKEKGNES 362
                                                  GKTW+ELEREASNAD+EKGNES
Sbjct: 976  DVEPESDSEDEASDSESLVESEDDDDDEDSEEDSEEEKGKTWEELEREASNADREKGNES 1035

Query: 363  DSEDDRKRRKMKAFGKSXXXXXXXXXXXTLPKKARFR 473
            DSE+DRKRRK K FGKS           ++PK+++ R
Sbjct: 1036 DSEEDRKRRKAKGFGKS----RGASLSSSMPKRSKLR 1068


>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score =  137 bits (345), Expect = 6e-30
 Identities = 74/137 (54%), Positives = 81/137 (59%)
 Frame = +3

Query: 3    TTDLKYYESRLNLNWRQILKTITDNPEQFIEDGGWEFLNLEAXXXXXXXXXXXXXGYVPX 182
            TTD+KYYESRLNLNWRQILKTITD+P+ FIE GGWEFLNLEA             GY P 
Sbjct: 913  TTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEP- 971

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTWDELEREASNADKEKGNES 362
                                                  GKTW+ELEREASNAD+EKGNES
Sbjct: 972  SDVEPESDSEDEASDSESLVESEDDGEEDSEEDSEEEKGKTWEELEREASNADREKGNES 1031

Query: 363  DSEDDRKRRKMKAFGKS 413
            DSE+DRKRRK K+FGKS
Sbjct: 1032 DSEEDRKRRKAKSFGKS 1048


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  137 bits (344), Expect = 8e-30
 Identities = 77/157 (49%), Positives = 89/157 (56%)
 Frame = +3

Query: 3    TTDLKYYESRLNLNWRQILKTITDNPEQFIEDGGWEFLNLEAXXXXXXXXXXXXXGYVPX 182
            TTDLKYYESRLNLNWR ILKTIT++PE+FIEDGGWEFLNLE              GY P 
Sbjct: 917  TTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFLNLEVSDSDSENSQESDQGYEP- 975

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTWDELEREASNADKEKGNES 362
                                                  GKTW+ELEREASNAD+EKG+ES
Sbjct: 976  SDVQSDTGSEEEGDDSESLVESEDDVEEDSDGDSEEEQGKTWEELEREASNADREKGDES 1035

Query: 363  DSEDDRKRRKMKAFGKSXXXXXXXXXXXTLPKKARFR 473
            DSE++RKRRKMKAFGK+           +LPK+ + R
Sbjct: 1036 DSEEERKRRKMKAFGKA-RVPEKRSTRGSLPKRPKLR 1071


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score =  137 bits (344), Expect = 8e-30
 Identities = 74/138 (53%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3    TTDLKYYESRLNLNWRQILKTITDNPEQFIEDGGWEFLNLEAXXXXXXXXXXXXXGYVP- 179
            TTD+KYYESRLNLNWRQILKTITD+P+ FIE GGWEFLNLEA             GY P 
Sbjct: 916  TTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEPS 975

Query: 180  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTWDELEREASNADKEKGNE 359
                                                   GKTW+ELEREASNAD+EKGNE
Sbjct: 976  DVEPESDSEDEASDSESLVESEDDDDDDEDSEEDSEEEKGKTWEELEREASNADREKGNE 1035

Query: 360  SDSEDDRKRRKMKAFGKS 413
            SDSE+DRKRRK K+FGKS
Sbjct: 1036 SDSEEDRKRRKAKSFGKS 1053


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