BLASTX nr result
ID: Salvia21_contig00005121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00005121
(1131 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum... 472 e-131
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 447 e-123
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 447 e-123
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu... 444 e-122
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2... 400 e-109
>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
Length = 1123
Score = 472 bits (1215), Expect = e-131
Identities = 232/378 (61%), Positives = 284/378 (75%), Gaps = 2/378 (0%)
Frame = +3
Query: 3 YNDFVKYGIQQVFDSVGEIMIEPGYDPSKRGDGEWRRATLKFGKVTLDRPTFWTGEKFSL 182
YNDF+ YGIQ+VFDSVGEI +EPGYDPSKRGDG+W+ A++KFGKVTL+RP FW GEKFS+
Sbjct: 85 YNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDWKHASVKFGKVTLERPKFWAGEKFSV 144
Query: 183 ADGAKEYLELLPRHAHLQNMTYSSRIKVQTHLQVYTEGLSRSDKFKTGVDKVVEKTMLNE 362
G KEYL+LLPRHA LQNMTYS+RI V+TH+QVYT+ L RSDKFKTGVD+ V+K E
Sbjct: 145 G-GGKEYLDLLPRHARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDRFVDKEWEVE 203
Query: 363 YQTDVNFGRLPVMVKSDLCWMSRHEPNGEEKRDCEFDQGGYFVIKGAEKTFIAQEQICLK 542
+ DV GR+PVMV S+LCWM NG +K DCEFD GGYF+ KGAEKTFIAQEQ+CLK
Sbjct: 204 GKRDVLIGRIPVMVNSELCWM-----NGVDKLDCEFDHGGYFIAKGAEKTFIAQEQLCLK 258
Query: 543 RLWVAKDPTWTIAYRPVSKRKRVYVKLVP--KVEHLIAGDKILTAYFYVTEVPVWLLFFA 716
RLWV+ +PTW + YRP KRKRVY+KL K+EH+ G+K L+ Y + E+P+W+LFFA
Sbjct: 259 RLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEKALSVYI-LAEMPIWVLFFA 317
Query: 717 LDVQNDRDVVELIGLDTDEDSAIANILVPSIYDADKKFDGFRKAGSAREHIKKLMQGCNF 896
L V +DR+VV LI +D ED+ I NILV SI++ADK + FRK A ++ +L++ C F
Sbjct: 318 LGVSSDREVVNLIDVDI-EDTTIVNILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKF 376
Query: 897 PPTETVDHLIDTYFFPNLSSRRQKAAFLAYMVKCLLEAYRGRRKVDNRDDLRNKXXXXXX 1076
PP E+V+ I+ Y FPNLS +QKA FL YMVKCLL ++ GRRKVDNRDD RNK
Sbjct: 377 PPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAG 436
Query: 1077 XXXXXXXXVHIKHAERRM 1130
HIKHAERRM
Sbjct: 437 ELLERELRAHIKHAERRM 454
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 447 bits (1150), Expect = e-123
Identities = 226/382 (59%), Positives = 280/382 (73%), Gaps = 6/382 (1%)
Frame = +3
Query: 3 YNDFVKYGIQQVFDSVGEIMIEPGYDPSKRGDGEWRRATLKFGKVTLDRPTFWTGEKFSL 182
+NDF+K GIQ+VFDS GEI +EPGYDPSKRG+G+WR A+++FGKVTL+RP W GE
Sbjct: 107 FNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGE---- 162
Query: 183 ADGAKEYLELLPRHAHLQNMTYSSRIKVQTHLQVYTEGLSRSDKFKTGVD-KVVEKTMLN 359
+DG KE L LPRHA LQNMTYSSR+K Q H QVYT+ L RSDK+KTG D K VEK ++
Sbjct: 163 SDG-KESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIF 221
Query: 360 EYQTDVNFGRLPVMVKSDLCWMSRHEPNGEEKRDCEFDQGGYFVIKGAEKTFIAQEQICL 539
E D+ GR+PVMVKS+LCWM NG E+ DCE+D GGYF+IKGAEKTFIAQEQICL
Sbjct: 222 EDNRDILIGRIPVMVKSELCWM-----NGVERGDCEYDHGGYFLIKGAEKTFIAQEQICL 276
Query: 540 KRLWVAKDPTWTIAYRPVSKRKRVYVKLVP-KVEHLIAGDKILTAYFYVTEVPVWLLFFA 716
KRLWV+ +PTW +AYRP+ KRKRVYVKL P K E+ G+K+LT YF TE+P+W+LFFA
Sbjct: 277 KRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWILFFA 336
Query: 717 LDVQNDRDVVELIGLDTDEDSAIANILVPSIYDADKKFDG----FRKAGSAREHIKKLMQ 884
L +D++VV+LI + D D+ I+NILV SI++AD++ + FR+ G+A + KL++
Sbjct: 337 LGASSDKEVVDLIDFNID-DAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVK 395
Query: 885 GCNFPPTETVDHLIDTYFFPNLSSRRQKAAFLAYMVKCLLEAYRGRRKVDNRDDLRNKXX 1064
C FPP E++ I Y FPN S +QKA FL YMVKCLL+AY GRRK DNRDD RNK
Sbjct: 396 SCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRL 455
Query: 1065 XXXXXXXXXXXXVHIKHAERRM 1130
VHI+HAERRM
Sbjct: 456 ELAGELLERELRVHIRHAERRM 477
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 447 bits (1150), Expect = e-123
Identities = 226/382 (59%), Positives = 280/382 (73%), Gaps = 6/382 (1%)
Frame = +3
Query: 3 YNDFVKYGIQQVFDSVGEIMIEPGYDPSKRGDGEWRRATLKFGKVTLDRPTFWTGEKFSL 182
+NDF+K GIQ+VFDS GEI +EPGYDPSKRG+G+WR A+++FGKVTL+RP W GE
Sbjct: 71 FNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGE---- 126
Query: 183 ADGAKEYLELLPRHAHLQNMTYSSRIKVQTHLQVYTEGLSRSDKFKTGVD-KVVEKTMLN 359
+DG KE L LPRHA LQNMTYSSR+K Q H QVYT+ L RSDK+KTG D K VEK ++
Sbjct: 127 SDG-KESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIF 185
Query: 360 EYQTDVNFGRLPVMVKSDLCWMSRHEPNGEEKRDCEFDQGGYFVIKGAEKTFIAQEQICL 539
E D+ GR+PVMVKS+LCWM NG E+ DCE+D GGYF+IKGAEKTFIAQEQICL
Sbjct: 186 EDNRDILIGRIPVMVKSELCWM-----NGVERGDCEYDHGGYFLIKGAEKTFIAQEQICL 240
Query: 540 KRLWVAKDPTWTIAYRPVSKRKRVYVKLVP-KVEHLIAGDKILTAYFYVTEVPVWLLFFA 716
KRLWV+ +PTW +AYRP+ KRKRVYVKL P K E+ G+K+LT YF TE+P+W+LFFA
Sbjct: 241 KRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWILFFA 300
Query: 717 LDVQNDRDVVELIGLDTDEDSAIANILVPSIYDADKKFDG----FRKAGSAREHIKKLMQ 884
L +D++VV+LI + D D+ I+NILV SI++AD++ + FR+ G+A + KL++
Sbjct: 301 LGASSDKEVVDLIDFNID-DAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVK 359
Query: 885 GCNFPPTETVDHLIDTYFFPNLSSRRQKAAFLAYMVKCLLEAYRGRRKVDNRDDLRNKXX 1064
C FPP E++ I Y FPN S +QKA FL YMVKCLL+AY GRRK DNRDD RNK
Sbjct: 360 SCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRL 419
Query: 1065 XXXXXXXXXXXXVHIKHAERRM 1130
VHI+HAERRM
Sbjct: 420 ELAGELLERELRVHIRHAERRM 441
>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
Length = 1018
Score = 444 bits (1142), Expect = e-122
Identities = 224/378 (59%), Positives = 278/378 (73%), Gaps = 2/378 (0%)
Frame = +3
Query: 3 YNDFVKYGIQQVFDSVGEIMIEPGYDPSKRGDGEWRRATLKFGKVTLDRPTFWTGEKFSL 182
YNDF++YGIQ+VFDSVGEI +EPGYDPSK+G+G+W+ A++KFGKVTLDRP FW GEKFS
Sbjct: 93 YNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGDWKHASVKFGKVTLDRPKFWAGEKFSA 152
Query: 183 ADGAKEYLELLPRHAHLQNMTYSSRIKVQTHLQVYTEGLSRSDKFKTGVDKVVEKTMLNE 362
+G +EYL L PRHA LQNMTYS+RI V+TH V+T+ L RSDKFKTGV++ V+K + E
Sbjct: 153 YNG-EEYLNLWPRHARLQNMTYSARIIVETH--VFTKKLVRSDKFKTGVEQFVDKECVME 209
Query: 363 YQTDVNFGRLPVMVKSDLCWMSRHEPNGEEKRDCEFDQGGYFVIKGAEKTFIAQEQICLK 542
+ DV GR+PVMV S+LCWMS G ++ DCEFD GGYF++KGAEK FIAQEQICLK
Sbjct: 210 DKRDVFIGRIPVMVNSELCWMS-----GADRPDCEFDHGGYFIVKGAEKIFIAQEQICLK 264
Query: 543 RLWVAKDPTWTIAYRPVSKRKRVYVKLVP--KVEHLIAGDKILTAYFYVTEVPVWLLFFA 716
RLWV+ TW +AYR KR RVY+KL K EH+ K L+ YF+ E+P+W+LFFA
Sbjct: 265 RLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGEAKALSVYFFA-EMPIWVLFFA 323
Query: 717 LDVQNDRDVVELIGLDTDEDSAIANILVPSIYDADKKFDGFRKAGSAREHIKKLMQGCNF 896
L V +DR+VV+LI +D +D+ I NILV SI+DADK + FRK A ++ +L++ C F
Sbjct: 324 LGVSSDREVVDLIDVDI-KDTNIINILVASIHDADKNCEDFRKGKKALAYVDRLVKSCKF 382
Query: 897 PPTETVDHLIDTYFFPNLSSRRQKAAFLAYMVKCLLEAYRGRRKVDNRDDLRNKXXXXXX 1076
PP E+V+ I Y FPNLS +QKA FL YMVKCLL +Y GRRKVDNRDD RNK
Sbjct: 383 PPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAG 442
Query: 1077 XXXXXXXXVHIKHAERRM 1130
VH+KHAERRM
Sbjct: 443 ELLERELRVHVKHAERRM 460
>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
predicted protein [Populus trichocarpa]
Length = 1160
Score = 400 bits (1027), Expect = e-109
Identities = 194/378 (51%), Positives = 262/378 (69%), Gaps = 2/378 (0%)
Frame = +3
Query: 3 YNDFVKYGIQQVFDSVGEIMIEPGYDPSKRGDGEWRRATLKFGKVTLDRPTFWTGEKFSL 182
YN F+ G+Q+VFDS GE+ +EPGYD SK+ DGEWRRA+++FGKVTLDRP+FW G
Sbjct: 48 YNSFINSGLQRVFDSFGEVAVEPGYDSSKQKDGEWRRASVRFGKVTLDRPSFWGGTSSDA 107
Query: 183 ADGAKEYLELLPRHAHLQNMTYSSRIKVQTHLQVYTEGLSRSDKFKTGVDKVVEKTMLNE 362
+ PRHA LQNMTYS+R+K+ ++QVYT+ + RSDKFKTG+DKVV+K +++
Sbjct: 108 EHN------MFPRHARLQNMTYSARMKIHVNVQVYTQTVGRSDKFKTGIDKVVQKNVVHT 161
Query: 363 YQTDVNFGRLPVMVKSDLCWMSRHEPNGEEKRDCEFDQGGYFVIKGAEKTFIAQEQICLK 542
++ GR+PVMVKSDLCW++ EK DC+FD GGYF+IKGAEK FIAQEQIC+K
Sbjct: 162 ENREIIIGRIPVMVKSDLCWLTT-----VEKGDCDFDHGGYFLIKGAEKVFIAQEQICMK 216
Query: 543 RLWVAKDPTWTIAYRPVSKRKRVYVKLVP--KVEHLIAGDKILTAYFYVTEVPVWLLFFA 716
RLW++ WT++Y+ KR R+ V+LV K+E++ K L YF TE+P+W+LFFA
Sbjct: 217 RLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGLCVYFLSTEIPLWILFFA 276
Query: 717 LDVQNDRDVVELIGLDTDEDSAIANILVPSIYDADKKFDGFRKAGSAREHIKKLMQGCNF 896
L V++D++V++LI ++ D++I NI SI+DAD+K + FR+ A +++ KL++ F
Sbjct: 277 LGVRSDKEVIDLIDYASN-DASIVNIFFASIHDADEKCEHFRREDRALDYVDKLLKKTRF 335
Query: 897 PPTETVDHLIDTYFFPNLSSRRQKAAFLAYMVKCLLEAYRGRRKVDNRDDLRNKXXXXXX 1076
PP E+++ I Y FP L+SRR KA FL YMVKCLLEAY G RK DNRD RNK
Sbjct: 336 PPKESIEDAISAYLFPRLNSRRHKARFLGYMVKCLLEAYTGHRKCDNRDSFRNKRFELAS 395
Query: 1077 XXXXXXXXVHIKHAERRM 1130
VH+ HA RRM
Sbjct: 396 ELLERELKVHVSHALRRM 413