BLASTX nr result

ID: Salvia21_contig00005020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00005020
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, c...   664   0.0  
sp|Q42967.1|DCUP_TOBAC RecName: Full=Uroporphyrinogen decarboxyl...   660   0.0  
ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ri...   649   0.0  
pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Mode...   645   0.0  
ref|XP_004165424.1| PREDICTED: uroporphyrinogen decarboxylase, c...   643   0.0  

>ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like [Vitis
            vinifera] gi|297736517|emb|CBI25388.3| unnamed protein
            product [Vitis vinifera]
          Length = 392

 Score =  664 bits (1713), Expect = 0.0
 Identities = 323/369 (87%), Positives = 351/369 (95%)
 Frame = -2

Query: 1262 PSLSNHKPKFVCSLGGAVAEPKAVNATEPLLLNAARGKEVDRPPVWLMRQAGRYMKSYQL 1083
            PS SN KP+  C+LGG VAEP  +NATEPLLL A RG++V+RPPVWLMRQAGRYMKSYQ+
Sbjct: 24   PSPSNSKPRIYCALGGTVAEPIIINATEPLLLTAVRGEDVERPPVWLMRQAGRYMKSYQI 83

Query: 1082 LCEKHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLTGMNIPFDIVKGKGPI 903
            +CEK+PSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPL+GMNIPFDI+KGKGP+
Sbjct: 84   ICEKYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPV 143

Query: 902  IFDPIRTAADVEKVIEFTPDESVPYVGEALTILRKEVNNEAAVLGFVGAPFTLASYVVEG 723
            IF+P+RTA DVE+V EF P++SVPYVGEALTILRKEV+N AAVLGFVGAPFTLASYVVEG
Sbjct: 144  IFNPLRTADDVEQVREFVPEDSVPYVGEALTILRKEVDNAAAVLGFVGAPFTLASYVVEG 203

Query: 722  GSSKHFSKIKRLAFSEPKVLHALLEKFAASMAKYVQYQADKGAQAVQIFDSWATELSPVD 543
            GSSKHFSKIKRLAFS+PKVLHALL+KF  SMAKY+QYQAD GAQAVQIFDSWATELSPVD
Sbjct: 204  GSSKHFSKIKRLAFSQPKVLHALLQKFTTSMAKYIQYQADNGAQAVQIFDSWATELSPVD 263

Query: 542  FEEFSLPYLKQIVDTVKRTHPSLPLILYASGSGGLIERLPLTGVDVVSLDWTVDMAEGRR 363
            FEEFSLPYLKQIVD+VK+THP+LPLILYASGSGGL+ERLPLTGVDVVSLDWTVDMAEGRR
Sbjct: 264  FEEFSLPYLKQIVDSVKQTHPNLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMAEGRR 323

Query: 362  RLGPDVAVQGNVDPGVLFGSKEFITERINDTVRKAGKGKHILNLGHGIVVGTPEENVAHF 183
            RLG DVAVQGN+DPGVLFGSKEFIT RINDTVRKAGKGKHILNLGHGIVVGTPEENVAHF
Sbjct: 324  RLGTDVAVQGNIDPGVLFGSKEFITNRINDTVRKAGKGKHILNLGHGIVVGTPEENVAHF 383

Query: 182  FEVAKGLRY 156
            FEVA+G+RY
Sbjct: 384  FEVARGIRY 392


>sp|Q42967.1|DCUP_TOBAC RecName: Full=Uroporphyrinogen decarboxylase, chloroplastic;
            Short=UPD; Short=URO-D; Flags: Precursor
            gi|1009429|emb|CAA58040.1| uroporphyrinogen decarboxylase
            [Nicotiana tabacum]
          Length = 391

 Score =  660 bits (1704), Expect = 0.0
 Identities = 328/390 (84%), Positives = 360/390 (92%), Gaps = 3/390 (0%)
 Frame = -2

Query: 1316 MACIYXXXXXXXSTKLNFPSLSNHK--PKFVC-SLGGAVAEPKAVNATEPLLLNAARGKE 1146
            M+C Y       S+K  F S SN    P+ +C S GG VAEPKA+NAT+PLLL+A RGKE
Sbjct: 2    MSCNYSFSSISPSSKSAFTSPSNFNLNPRLICCSAGGTVAEPKAINATQPLLLDAVRGKE 61

Query: 1145 VDRPPVWLMRQAGRYMKSYQLLCEKHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSD 966
            V+RPPVWLMRQAGRYMKSYQLLCEK+P FR+RSENVDLVVEISLQPWKVF+PDGVILFSD
Sbjct: 62   VERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQPWKVFRPDGVILFSD 121

Query: 965  ILTPLTGMNIPFDIVKGKGPIIFDPIRTAADVEKVIEFTPDESVPYVGEALTILRKEVNN 786
            ILTPL+GMNIPFDI+KGKGP+IFDP+RTAADVEKV EF P++SVPYVGEALTILRKEVNN
Sbjct: 122  ILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNN 181

Query: 785  EAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEPKVLHALLEKFAASMAKYVQYQA 606
            +AAVLGFVGAPFTLASYVVEGGSSK+F+KIKRLAF+EPKVLHALL+KFA SMAKY++YQA
Sbjct: 182  QAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQA 241

Query: 605  DKGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKRTHPSLPLILYASGSGGLIERL 426
            D GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVD+VK THP+LPLILYASGSGGL+ERL
Sbjct: 242  DSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGGLLERL 301

Query: 425  PLTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGVLFGSKEFITERINDTVRKAGKGK 246
            PLTGVDVVSLDWTVDMA+GRRRLGP+VA+QGNVDPGVLFGSKEFIT RINDTV+KAGKGK
Sbjct: 302  PLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKGK 361

Query: 245  HILNLGHGIVVGTPEENVAHFFEVAKGLRY 156
            HILNLGHGI VGTPEEN AHFFE+AKGLRY
Sbjct: 362  HILNLGHGIKVGTPEENFAHFFEIAKGLRY 391


>ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
            gi|223539973|gb|EEF41551.1| uroporphyrinogen
            decarboxylase, putative [Ricinus communis]
          Length = 389

 Score =  649 bits (1673), Expect = 0.0
 Identities = 321/375 (85%), Positives = 348/375 (92%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1277 TKLNFPSLSNHKPKFV-CSLGGAVAEPKAVNATEPLLLNAARGKEVDRPPVWLMRQAGRY 1101
            T  + P  S  KP  + CSL G VAEPK  +  EPLLLNA RG++V+RPPVWLMRQAGRY
Sbjct: 15   TLYSSPRKSVSKPPIIHCSLPGTVAEPKPASVAEPLLLNAVRGEDVERPPVWLMRQAGRY 74

Query: 1100 MKSYQLLCEKHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLTGMNIPFDIV 921
            MKSYQ++CEK+PSFRERSENVDLVVEISLQPW VFKPDGVILFSDILTPL+GMNIPFDIV
Sbjct: 75   MKSYQIICEKYPSFRERSENVDLVVEISLQPWNVFKPDGVILFSDILTPLSGMNIPFDIV 134

Query: 920  KGKGPIIFDPIRTAADVEKVIEFTPDESVPYVGEALTILRKEVNNEAAVLGFVGAPFTLA 741
            KGKGPIIF+P+RTA DV++V EF P+ESVPYVGE+LTILRKEV+N+AAVLGFVGAPFTLA
Sbjct: 135  KGKGPIIFNPLRTAEDVDQVREFVPEESVPYVGESLTILRKEVDNKAAVLGFVGAPFTLA 194

Query: 740  SYVVEGGSSKHFSKIKRLAFSEPKVLHALLEKFAASMAKYVQYQADKGAQAVQIFDSWAT 561
            SY VEGGSSKHFSKIKRLAFS+P+VLHALL+KFA SMAKYVQYQAD GAQAVQIFDSWAT
Sbjct: 195  SYCVEGGSSKHFSKIKRLAFSQPEVLHALLQKFATSMAKYVQYQADNGAQAVQIFDSWAT 254

Query: 560  ELSPVDFEEFSLPYLKQIVDTVKRTHPSLPLILYASGSGGLIERLPLTGVDVVSLDWTVD 381
            ELSPVDFE+FSLPYLKQIVDTVK+THP+LPLILYASGSGGL+ERL LTGVDVVSLDWTVD
Sbjct: 255  ELSPVDFEQFSLPYLKQIVDTVKKTHPNLPLILYASGSGGLLERLALTGVDVVSLDWTVD 314

Query: 380  MAEGRRRLGPDVAVQGNVDPGVLFGSKEFITERINDTVRKAGKGKHILNLGHGIVVGTPE 201
            MAEGRRRLGPD+AVQGNVDPGVLFGSKEFIT RIND VRKAGKGKHILNLGHGIVVGTPE
Sbjct: 315  MAEGRRRLGPDMAVQGNVDPGVLFGSKEFITNRINDVVRKAGKGKHILNLGHGIVVGTPE 374

Query: 200  ENVAHFFEVAKGLRY 156
            ENVAHFFEVAKG+RY
Sbjct: 375  ENVAHFFEVAKGIRY 389


>pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Modeling Of The
            Uroporphyrinogen-Iii Decarboxylase From Nicotiana
            Tabacum: Implications For The Catalytic Mechanism
          Length = 353

 Score =  645 bits (1665), Expect = 0.0
 Identities = 314/352 (89%), Positives = 342/352 (97%)
 Frame = -2

Query: 1211 VAEPKAVNATEPLLLNAARGKEVDRPPVWLMRQAGRYMKSYQLLCEKHPSFRERSENVDL 1032
            VAEPKA+NAT+PLLL+A RGKEV+RPPVWLMRQAGRYMKSYQLLCEK+P FR+RSENVDL
Sbjct: 2    VAEPKAINATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDL 61

Query: 1031 VVEISLQPWKVFKPDGVILFSDILTPLTGMNIPFDIVKGKGPIIFDPIRTAADVEKVIEF 852
            VVEISLQPWKVF+PDGVILFSDILTPL+GMNIPFDI+KGKGP+IFDP+RTAADVEKV EF
Sbjct: 62   VVEISLQPWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREF 121

Query: 851  TPDESVPYVGEALTILRKEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEP 672
             P++SVPYVGEALTILRKEVNN+AAVLGFVGAPFTLASYVVEGGSSK+F+KIKRLAF+EP
Sbjct: 122  IPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEP 181

Query: 671  KVLHALLEKFAASMAKYVQYQADKGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVK 492
            KVLHALL+KFA SMAKY++YQAD GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVD+VK
Sbjct: 182  KVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVK 241

Query: 491  RTHPSLPLILYASGSGGLIERLPLTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGVL 312
             THP+LPLILYASGSGGL+ERLPLTGVDVVSLDWTVDMA+GRRRLGP+VA+QGNVDPGVL
Sbjct: 242  LTHPNLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVL 301

Query: 311  FGSKEFITERINDTVRKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKGLRY 156
            FGSKEFIT RINDTV+KAGKGKHILNLGHGI VGTPEEN AHFFE+AKGLRY
Sbjct: 302  FGSKEFITNRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKGLRY 353


>ref|XP_004165424.1| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
            [Cucumis sativus]
          Length = 392

 Score =  643 bits (1658), Expect = 0.0
 Identities = 314/366 (85%), Positives = 346/366 (94%)
 Frame = -2

Query: 1253 SNHKPKFVCSLGGAVAEPKAVNATEPLLLNAARGKEVDRPPVWLMRQAGRYMKSYQLLCE 1074
            ++ KP+  CSLGG VAEPK   + EPLLLNA RG++V+RPPVWLMRQAGRYMKSYQ++CE
Sbjct: 27   ASFKPRIHCSLGGTVAEPKPTTSAEPLLLNAVRGEDVERPPVWLMRQAGRYMKSYQVICE 86

Query: 1073 KHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLTGMNIPFDIVKGKGPIIFD 894
            K+PSFR+RSEN DLVVEISLQPWKVFKPDGVILFSDILTPL+GMNIPFDIVKGKGPII +
Sbjct: 87   KYPSFRQRSENTDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIAN 146

Query: 893  PIRTAADVEKVIEFTPDESVPYVGEALTILRKEVNNEAAVLGFVGAPFTLASYVVEGGSS 714
            PI  AA V++V EF P+E+VPYVGEALTILRKEV+N+AAVLGFVGAPFTLASYVVEGGSS
Sbjct: 147  PISEAAQVDQVREFIPEENVPYVGEALTILRKEVDNKAAVLGFVGAPFTLASYVVEGGSS 206

Query: 713  KHFSKIKRLAFSEPKVLHALLEKFAASMAKYVQYQADKGAQAVQIFDSWATELSPVDFEE 534
            KHFSKIKRLAFS+PKVLHALL+KF +SMA+YVQYQAD+GAQAVQIFDSWATELSPVDFEE
Sbjct: 207  KHFSKIKRLAFSQPKVLHALLQKFTSSMARYVQYQADRGAQAVQIFDSWATELSPVDFEE 266

Query: 533  FSLPYLKQIVDTVKRTHPSLPLILYASGSGGLIERLPLTGVDVVSLDWTVDMAEGRRRLG 354
            FSLPYLKQIV++VK+THP+LPLILYASGSGGL+ERL  TGVDVVSLDWTVDMAEGRRRLG
Sbjct: 267  FSLPYLKQIVESVKKTHPNLPLILYASGSGGLLERLASTGVDVVSLDWTVDMAEGRRRLG 326

Query: 353  PDVAVQGNVDPGVLFGSKEFITERINDTVRKAGKGKHILNLGHGIVVGTPEENVAHFFEV 174
             D+AVQGNVDPGVLFGSKEFITERINDTV+KAGKGKHILNLGHGIVVGTPEENVAHFFEV
Sbjct: 327  ADIAVQGNVDPGVLFGSKEFITERINDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEV 386

Query: 173  AKGLRY 156
            AKG+RY
Sbjct: 387  AKGIRY 392


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