BLASTX nr result

ID: Salvia21_contig00004873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004873
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534347.1| rubisco subunit binding-protein alpha subuni...   231   1e-58
emb|CAB51619.1| unnamed protein product [Ricinus communis]            231   1e-58
sp|P08824.1|RUBA_RICCO RecName: Full=RuBisCO large subunit-bindi...   231   1e-58
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2...   229   6e-58
ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding pro...   228   2e-57

>ref|XP_002534347.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis] gi|223525447|gb|EEF28034.1| rubisco
           subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
          Length = 501

 Score =  231 bits (590), Expect = 1e-58
 Identities = 118/127 (92%), Positives = 123/127 (96%)
 Frame = +2

Query: 575 KTVQGLVEELEKKARPIKGRDDIKAIASISAGNDETIGTMIADAIDKVGPDGVLSIESSS 754
           KTVQGL+EELEKKARP+KGRDDIKA+ASISAGNDE IGTMIADAIDKVGPDGVLSIESSS
Sbjct: 166 KTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSS 225

Query: 755 SFETTVDVEEGMEIDRGYISPQFVTNPEKLTVEFENTRVLVTDQKISAIKDIIPLLEKTT 934
           SFETTV+VEEGMEIDRGYISPQFVTNPEKL  EFEN RVLVTDQKI+AIKDIIPLLEKTT
Sbjct: 226 SFETTVEVEEGMEIDRGYISPQFVTNPEKLICEFENARVLVTDQKITAIKDIIPLLEKTT 285

Query: 935 QLRAPLL 955
           QLRAPLL
Sbjct: 286 QLRAPLL 292



 Score =  148 bits (373), Expect = 2e-33
 Identities = 81/109 (74%), Positives = 91/109 (83%)
 Frame = +3

Query: 123 MASANAISTASILPSSSKQDGSKNRKVNQLLQQGQRIGQKQSKNRFVVRANAKEIAFDQK 302
           MA++NAISTASIL   S + G+  R+ NQ  QQ QR+   QS  RF VRANAK+IAFDQ 
Sbjct: 1   MATSNAISTASIL--CSPKQGNLRRRTNQ--QQNQRLNYGQSSRRFTVRANAKDIAFDQN 56

Query: 303 SRSAMQSGIDKLANAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE 449
           SR+A+QSGIDKLA+AVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE
Sbjct: 57  SRTALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE 105


>emb|CAB51619.1| unnamed protein product [Ricinus communis]
          Length = 496

 Score =  231 bits (590), Expect = 1e-58
 Identities = 118/127 (92%), Positives = 123/127 (96%)
 Frame = +2

Query: 575 KTVQGLVEELEKKARPIKGRDDIKAIASISAGNDETIGTMIADAIDKVGPDGVLSIESSS 754
           KTVQGL+EELEKKARP+KGRDDIKA+ASISAGNDE IGTMIADAIDKVGPDGVLSIESSS
Sbjct: 109 KTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSS 168

Query: 755 SFETTVDVEEGMEIDRGYISPQFVTNPEKLTVEFENTRVLVTDQKISAIKDIIPLLEKTT 934
           SFETTV+VEEGMEIDRGYISPQFVTNPEKL  EFEN RVLVTDQKI+AIKDIIPLLEKTT
Sbjct: 169 SFETTVEVEEGMEIDRGYISPQFVTNPEKLICEFENARVLVTDQKITAIKDIIPLLEKTT 228

Query: 935 QLRAPLL 955
           QLRAPLL
Sbjct: 229 QLRAPLL 235



 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 44/48 (91%), Positives = 48/48 (100%)
 Frame = +3

Query: 306 RSAMQSGIDKLANAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE 449
           R+A+QSGIDKLA+AVGLTLGPRGRNVVLDEFGSPKVVN+GVTIARAIE
Sbjct: 1   RTALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNEGVTIARAIE 48


>sp|P08824.1|RUBA_RICCO RecName: Full=RuBisCO large subunit-binding protein subunit alpha;
           AltName: Full=60 kDa chaperonin subunit alpha; AltName:
           Full=CPN-60 alpha
          Length = 495

 Score =  231 bits (590), Expect = 1e-58
 Identities = 118/127 (92%), Positives = 123/127 (96%)
 Frame = +2

Query: 575 KTVQGLVEELEKKARPIKGRDDIKAIASISAGNDETIGTMIADAIDKVGPDGVLSIESSS 754
           KTVQGL+EELEKKARP+KGRDDIKA+ASISAGNDE IGTMIADAIDKVGPDGVLSIESSS
Sbjct: 109 KTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSS 168

Query: 755 SFETTVDVEEGMEIDRGYISPQFVTNPEKLTVEFENTRVLVTDQKISAIKDIIPLLEKTT 934
           SFETTV+VEEGMEIDRGYISPQFVTNPEKL  EFEN RVLVTDQKI+AIKDIIPLLEKTT
Sbjct: 169 SFETTVEVEEGMEIDRGYISPQFVTNPEKLICEFENARVLVTDQKITAIKDIIPLLEKTT 228

Query: 935 QLRAPLL 955
           QLRAPLL
Sbjct: 229 QLRAPLL 235



 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 44/48 (91%), Positives = 48/48 (100%)
 Frame = +3

Query: 306 RSAMQSGIDKLANAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE 449
           R+A+QSGIDKLA+AVGLTLGPRGRNVVLDEFGSPKVVN+GVTIARAIE
Sbjct: 1   RTALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNEGVTIARAIE 48


>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  229 bits (585), Expect = 6e-58
 Identities = 117/127 (92%), Positives = 122/127 (96%)
 Frame = +2

Query: 575 KTVQGLVEELEKKARPIKGRDDIKAIASISAGNDETIGTMIADAIDKVGPDGVLSIESSS 754
           KTVQGLVEELEKKARP+KGRDDIKA+ASISAGNDE IGTMIADAIDKVGPDGVLSIESSS
Sbjct: 166 KTVQGLVEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSS 225

Query: 755 SFETTVDVEEGMEIDRGYISPQFVTNPEKLTVEFENTRVLVTDQKISAIKDIIPLLEKTT 934
           SFET V+VEEGMEIDRGYISPQFVTNPEKL  EFEN RVL+TDQKI+AIKDIIPLLEKTT
Sbjct: 226 SFETVVEVEEGMEIDRGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTT 285

Query: 935 QLRAPLL 955
           QLRAPLL
Sbjct: 286 QLRAPLL 292



 Score =  140 bits (353), Expect = 4e-31
 Identities = 78/109 (71%), Positives = 88/109 (80%)
 Frame = +3

Query: 123 MASANAISTASILPSSSKQDGSKNRKVNQLLQQGQRIGQKQSKNRFVVRANAKEIAFDQK 302
           MA++NA+STASIL   S + G   R+ NQ  Q   R+    S  RF VRANAK+IAFDQK
Sbjct: 1   MATSNALSTASIL--CSPKQGGLRRRGNQ--QNNSRLNYGLSSRRFSVRANAKDIAFDQK 56

Query: 303 SRSAMQSGIDKLANAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE 449
           SR+A+QSGIDKLA+AVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE
Sbjct: 57  SRAALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE 105


>ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Glycine max]
          Length = 584

 Score =  228 bits (581), Expect = 2e-57
 Identities = 117/127 (92%), Positives = 122/127 (96%)
 Frame = +2

Query: 575 KTVQGLVEELEKKARPIKGRDDIKAIASISAGNDETIGTMIADAIDKVGPDGVLSIESSS 754
           KTVQGLVEELEKKARP+KG DDIKA+ASISAGNDE IG MIA+AIDKVGPDGVLSIESSS
Sbjct: 164 KTVQGLVEELEKKARPVKGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSS 223

Query: 755 SFETTVDVEEGMEIDRGYISPQFVTNPEKLTVEFENTRVLVTDQKISAIKDIIPLLEKTT 934
           SFETTV+VEEGMEIDRGYISPQFVTNPEKL VEFEN RVL+TDQKISAIKDIIPLLEKTT
Sbjct: 224 SFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTT 283

Query: 935 QLRAPLL 955
           QLRAPLL
Sbjct: 284 QLRAPLL 290



 Score =  137 bits (345), Expect = 4e-30
 Identities = 76/109 (69%), Positives = 88/109 (80%)
 Frame = +3

Query: 123 MASANAISTASILPSSSKQDGSKNRKVNQLLQQGQRIGQKQSKNRFVVRANAKEIAFDQK 302
           MAS NA+S+ASIL S ++Q  S  R+ N       R+  ++  NRF V+A+AKEIAFDQ 
Sbjct: 1   MASTNALSSASILRSPNRQ--SLTRRANH----NGRVNYRKPNNRFSVKASAKEIAFDQH 54

Query: 303 SRSAMQSGIDKLANAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE 449
           SRSAMQ+GIDKLA+AVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE
Sbjct: 55  SRSAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIE 103


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