BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004758
         (1476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   496   e-138
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   459   e-127
ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   439   e-121
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   434   e-119
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   431   e-118

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis vinifera]
            gi|296090438|emb|CBI40257.3| unnamed protein product
            [Vitis vinifera]
          Length = 476

 Score =  496 bits (1277), Expect = e-138
 Identities = 260/452 (57%), Positives = 330/452 (73%), Gaps = 24/452 (5%)
 Frame = -2

Query: 1400 IKAIYEQQCCYTAGANG-ENYEKEKNNQWLILPPFTPTADGSSIGKKLYGRTDETNT--- 1233
            I A+ +Q+ C+    +      K K  +W  LP FTP  D SS+GK L G   + NT   
Sbjct: 28   ISALDQQRSCFATSNDAVSEAHKSKKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNT 87

Query: 1232 ------TALKWILKCCPHLPRSLVQKLFRLRQVRKEC----SSD---ESKDQRPRRVGAK 1092
                  TALKW+++CCP LPRSLVQKLFRLRQVR+E     +SD   ++++ R +RV AK
Sbjct: 88   TAGASTTALKWVVRCCPQLPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVAAK 147

Query: 1091 DLMDIGDRICLPKSVDEKSHPTTAENQSFSSEEERKIVQSLELYKDSAIIVINKPPGMPV 912
            DLM++GD+I LP +V+E     + +++   ++EE   V +LELYKD AIIV+NKPPG+PV
Sbjct: 148  DLMNLGDQILLPITVEEFP---SEKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGLPV 204

Query: 911  QGGVGIRRSLDELAAKYLRYDYMEPPRLVHRLDRDSSGILVMGRTQLSTSVLHSVFREKT 732
            QGG+GI+RSLDELAA YLRYD  EPPRLVHRLDRDSSGIL+MGRTQ S ++LHS+FREKT
Sbjct: 205  QGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSIFREKT 264

Query: 731  IGASN-DVLGCKRILQKKYWALVIGSPRRRQGSVSVPLIKVVIDNGKSERITVADNSNTL 555
             GASN D+   KRILQ++YWALVIGSPRR +G +S PL KVV+D+GKSERIT+ DN  T+
Sbjct: 265  FGASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVDNVQTM 324

Query: 554  SGQHAVTDYRVIASSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHKKL 375
            S QHA+T+YRVI SS  GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYG QAH+K 
Sbjct: 325  SSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKW 384

Query: 374  GHYLES-----ASDHLKLADKDTAGLELESGSLSDEQFSLHLHCKEMVVPDISVVLQHGN 210
                +S       ++L        GL+LESGS+ D+Q  LHLHCK+MV+P++S+ LQ+  
Sbjct: 385  KQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQNLQ 444

Query: 209  IS-DLDSARIGNIVLRAPLPAHMQTSWDLLNS 117
            +S + D + + ++   APLP+HMQ SWD+LNS
Sbjct: 445  LSAECDLSELESLEFVAPLPSHMQRSWDILNS 476


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 536

 Score =  459 bits (1181), Expect = e-127
 Identities = 249/425 (58%), Positives = 306/425 (72%), Gaps = 17/425 (4%)
 Frame = -2

Query: 1340 EKEKNN-----QWLILPPFTPTADGSSIGKKLYGRTD---ETNTTALKWILKCCPHLPRS 1185
            +  KNN     ++  LPP+T T  GS++GK L         T TTALKW+L+CCP LPR+
Sbjct: 116  QTSKNNTKNTGKFFTLPPYTSTISGSALGKALSATATAKASTETTALKWVLRCCPELPRN 175

Query: 1184 LVQKLFRLRQVRKECSS--DESKDQRPRRVGAKDLMDIGDRICLPKSVDEKSHPTTAENQ 1011
            LVQKLFRLRQV++E  +  D   + + +RV AKDLM++GDRI LP SV         + +
Sbjct: 176  LVQKLFRLRQVKRELLNVGDGEMEHKTKRVAAKDLMNVGDRIFLPISVQALPFE---KQK 232

Query: 1010 SFSSEEERKIVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDYMEPPR 831
                E+E   ++ LELYKD AIIV+NKPPGMPVQGG+GI+ S DELAA  L YDY EPPR
Sbjct: 233  CHCGEKEANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFDELAASCLSYDYSEPPR 292

Query: 830  LVHRLDRDSSGILVMGRTQLSTSVLHSVFREKTIGASNDVLG-CKRILQKKYWALVIGSP 654
            LVHRLDRDSSGILVMGRTQ ST VLHSVFREKT  ASN  +G  +RILQ+KYWALVIGSP
Sbjct: 293  LVHRLDRDSSGILVMGRTQTSTMVLHSVFREKTFAASNHDIGERRRILQRKYWALVIGSP 352

Query: 653  RRRQGSVSVPLIKVVIDNGKSERITVADNSNTLSGQHAVTDYRVIASSPSGYTWLELSPL 474
            RR++G +S PL KVV+D+GKS+RITV +N+ + S QHAVT YRV+ SS  GY WLELSP+
Sbjct: 353  RRQKGIISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRVMESS-HGYAWLELSPI 411

Query: 473  TGRKHQLRVHCAEVLGTPIVGDYKYGRQAHKKLGHY----LESASDHLKLADKDTA-GLE 309
            TGRKHQLRVHCAEVLGTPIVGDYKYG Q H+K        LE  S+   L  K    G++
Sbjct: 412  TGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKISNENALCKKILPFGID 471

Query: 308  LESGSLSDEQFSLHLHCKEMVVPDISVVLQH-GNISDLDSARIGNIVLRAPLPAHMQTSW 132
            LESGS+S++   LHLHCK+MV+PD+S  L+     S+ D + + +I L APLP++MQ SW
Sbjct: 472  LESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLKSIELDAPLPSYMQRSW 531

Query: 131  DLLNS 117
            D+LNS
Sbjct: 532  DILNS 536


>ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Glycine
            max]
          Length = 427

 Score =  439 bits (1130), Expect = e-121
 Identities = 229/407 (56%), Positives = 294/407 (72%), Gaps = 5/407 (1%)
 Frame = -2

Query: 1325 NQWLILPPFTPTADGSSIGKKLYGRTDETNTTALKWILKCCPHLPRSLVQKLFRLRQVRK 1146
            ++WL LPP + ++  S    +L      T TTALKW+++CCPHLPR+LV KLFRLRQVR 
Sbjct: 29   DKWLTLPPVSASSSASVELNQL----SSTPTTALKWVVRCCPHLPRALVHKLFRLRQVRI 84

Query: 1145 ECSSDESKDQRPRRVGAKDLMDIGDRICLPKSVDEKSHPTTAENQSFSSEEERKIVQSLE 966
              ++   + Q  +RV AKD ++ GDRI LP+SV  K  PT     S  + ++   +++L 
Sbjct: 85   HPAT-VIQQQTFKRVAAKDTLNTGDRILLPQSVKVKQTPT----HSHLTPQQINFIRTLV 139

Query: 965  LYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDYMEPPRLVHRLDRDSSGILVM 786
            +YKD AI+V+NKPPGMPVQGG+ I+RSLD +AA  L Y Y +PPRLVHRLDRD SGILVM
Sbjct: 140  IYKDPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVM 199

Query: 785  GRTQLSTSVLHSVFREKTIGASNDVLGCKRILQKKYWALVIGSPRRRQGSVSVPLIKVVI 606
            GRT  ST+VLHS+FREKT  AS+D+   KRILQ++YWALV+G PRR +G V+  L KVV+
Sbjct: 200  GRTHTSTTVLHSIFREKTSRASDDIGKEKRILQRRYWALVLGCPRRPKGLVTASLGKVVV 259

Query: 605  DNGKSERITVADNSNTLSGQHAVTDYRVIASSPSGYTWLELSPLTGRKHQLRVHCAEVLG 426
            DNG+S+RIT+ DNS  +S QHA+T+YRVIASS  GYTWLEL+PLTGRKHQLRVHCAEVLG
Sbjct: 260  DNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLG 319

Query: 425  TPIVGDYKYGRQAHKKLGHY----LESASDHLKLADKDTAGLELESGSLSDEQFSLHLHC 258
            TPIVGDYKYG QAH+K GH+    +E + + L   +K   GL L  GS+S+    LHLHC
Sbjct: 320  TPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHC 379

Query: 257  KEMVVPDISVVLQH-GNISDLDSARIGNIVLRAPLPAHMQTSWDLLN 120
            K+MV+P+IS  LQ+  + S  D + +  + L A LP +MQ SWD+ N
Sbjct: 380  KQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 426


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
            gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
            pseudourine synthase 4, mitochondrial; AltName: Full=RNA
            pseudouridylate synthase 4; AltName: Full=RNA-uridine
            isomerase 4; Flags: Precursor gi|11994467|dbj|BAB02469.1|
            unnamed protein product [Arabidopsis thaliana]
            gi|110737723|dbj|BAF00800.1| hypothetical protein
            [Arabidopsis thaliana] gi|134031916|gb|ABO45695.1|
            At3g19440 [Arabidopsis thaliana]
            gi|332642719|gb|AEE76240.1| RNA pseudourine synthase 4
            [Arabidopsis thaliana]
          Length = 477

 Score =  434 bits (1115), Expect = e-119
 Identities = 236/426 (55%), Positives = 304/426 (71%), Gaps = 17/426 (3%)
 Frame = -2

Query: 1334 EKNNQWLILPPFTPTADGSSIGKKLYG-------RTDETNTTALKWILKCCPHLPRSLVQ 1176
            +   +WL LPPF+PT DG+++GK L          TD + TTAL+WIL+C P LPR+LVQ
Sbjct: 50   DSRGKWLTLPPFSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQ 109

Query: 1175 KLFRLRQVRKECS----SDESKDQRPRRVGAKDLMDIGDRICLPKSVDEKSHPTT-AENQ 1011
            KLFRLRQVR+E S     DE +  + +RV AK+ +++GDRI LP SVD  +  T  A+ +
Sbjct: 110  KLFRLRQVRREMSMSVDGDELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKE 169

Query: 1010 SFS-SEEERKIVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDYMEPP 834
            SF  S+EERK V SL LYKD AIIV+NKP G+ VQGG GI+ S+DELAA  L++D  E P
Sbjct: 170  SFQCSDEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESP 229

Query: 833  RLVHRLDRDSSGILVMGRTQLSTSVLHSVFREKTIGASNDVLGCKR---ILQKKYWALVI 663
            RLVHRLDRD SG+LV+ RTQ + +VLHS+FREKT GAS    G K+    L++KY ALVI
Sbjct: 230  RLVHRLDRDCSGLLVLARTQTAATVLHSIFREKTTGAS--AYGVKKNVKSLKRKYMALVI 287

Query: 662  GSPRRRQGSVSVPLIKVVIDNGKSERITVADNSNTLSGQHAVTDYRVIASSPSGYTWLEL 483
            G P R++G +S PL KVV+D+GKSERITV DN   +S QHA+T+YRVI SSP GYTWLEL
Sbjct: 288  GCPPRQRGQISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLEL 347

Query: 482  SPLTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHKKLGHYLESASDHLKLADKDTAGLELE 303
             PLTGRKHQLRVHCAEVLGTPIVGDYKYG QAHK    ++ S ++  K       GL+L+
Sbjct: 348  RPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVSSENNPTK-QSSSPFGLDLD 406

Query: 302  SGSLSDEQFSLHLHCKEMVVPDISVVLQHGNI-SDLDSARIGNIVLRAPLPAHMQTSWDL 126
             G +S +Q  LHLH K++ +P+IS +L+   + SD D + + ++   APLP+HMQ S++L
Sbjct: 407  GGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDSDISDLDSLKFDAPLPSHMQLSFNL 466

Query: 125  LNSELQ 108
            L S ++
Sbjct: 467  LKSRVE 472


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  431 bits (1107), Expect = e-118
 Identities = 231/459 (50%), Positives = 305/459 (66%), Gaps = 20/459 (4%)
 Frame = -2

Query: 1436 PNAAVPSCKIKLIKAIYEQQCCYTAGANGENYEKEKN----NQWLILPPFTPTADGSSIG 1269
            P+   PS +I      +  +         E   ++KN    N+W  LPP+T T +GS +G
Sbjct: 17   PSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRWFTLPPYTATVNGSILG 76

Query: 1268 KKLYGRTDETNT-------TALKWILKCCPHLPRSLVQKLFRLRQVRKECSSDESKD--- 1119
             ++     +          TALKW+++CCP LPRSLVQKLFRLR+VR+  S  E+ +   
Sbjct: 77   NRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLRKVRRGSSMIENSEYNL 136

Query: 1118 ---QRPRRVGAKDLMDIGDRICLPKSVDEKSHPTTAENQSFSSEEERKIVQSLELYKDSA 948
                + +RV AKD++++GD+I LP SV   S   T + + + ++EE   + SL L+KD A
Sbjct: 137  EARDQLKRVAAKDILNVGDQIFLPMSVQVFS---TEKTRDYCNKEEETFMHSLVLHKDPA 193

Query: 947  IIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDYMEPPRLVHRLDRDSSGILVMGRTQLS 768
            I+VINKPPG+PVQGG+G++RSLDELAA  L Y Y EPPRLVHRLDRDSSGIL+MGRT  S
Sbjct: 194  ILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRTSTS 253

Query: 767  TSVLHSVFREKTIGAS---NDVLGCKRILQKKYWALVIGSPRRRQGSVSVPLIKVVIDNG 597
            TS+LHSVFREKT  AS   N V   K+IL K+YWALVIGSPRR +G ++ PL K+V+D+G
Sbjct: 254  TSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLITAPLGKIVLDDG 313

Query: 596  KSERITVADNSNTLSGQHAVTDYRVIASSPSGYTWLELSPLTGRKHQLRVHCAEVLGTPI 417
            +SE+I V DN+  +  Q A+T Y+VI  S  GYTWLEL PLTGRKHQLRVHCAEVLGTPI
Sbjct: 314  RSEQIMVIDNAEPMPFQQAITQYKVI-KSHHGYTWLELCPLTGRKHQLRVHCAEVLGTPI 372

Query: 416  VGDYKYGRQAHKKLGHYLESASDHLKLADKDTAGLELESGSLSDEQFSLHLHCKEMVVPD 237
            VGDYKYG QAHK    +  +   +         GL+ ESGS+++    LHLHCK++ +PD
Sbjct: 373  VGDYKYGWQAHKNWKPFCSNFHKNQGKKQFLPFGLDFESGSIAENSPRLHLHCKQLTLPD 432

Query: 236  ISVVLQHGNISDLDSARIGNIVLRAPLPAHMQTSWDLLN 120
            +S  L H +  D D +R+  + L APLP++MQ SWD++N
Sbjct: 433  VSFAL-HNDSLDRDCSRLECLELDAPLPSYMQKSWDIIN 470