BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004695
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...   453   e-125
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop...   451   e-124
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   444   e-122
ref|NP_001238343.1| transcription initiation factor IIB [Glycine...   442   e-121
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   442   e-121

>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata] gi|297328501|gb|EFH58920.1| transcription
            initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 312

 Score =  453 bits (1165), Expect = e-125
 Identities = 221/313 (70%), Positives = 263/313 (84%), Gaps = 3/313 (0%)
 Frame = +3

Query: 267  MSDSYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 446
            MSD++C DCKR+TEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 447  GPVNPLLGDGALTTVISRAANGSNAD---SSLARLQNRGGDPDRAIVLAFKAISNMADRL 617
            GP NPLL DG LTTVIS+  NGS+ D   SSL R QNRG +PDR +++AFK I+ MADRL
Sbjct: 61   GPTNPLLADGGLTTVISKP-NGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRL 119

Query: 618  SLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGAT 797
             LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GAT
Sbjct: 120  GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 179

Query: 798  KKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGD 977
            KKEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE+VQK+ +
Sbjct: 180  KKEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEE 239

Query: 978  FDXXXXXXXXXXXXXFMVTQLSESKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIPEW 1157
            FD             +++TQLS+ KKPLRDIS+AT VAEGTI+N+Y+DLYPH +KIIP W
Sbjct: 240  FDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAW 299

Query: 1158 YAKERDLKNLSSP 1196
            YAKE DLKNL SP
Sbjct: 300  YAKEEDLKNLQSP 312


>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
            gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
            Full=Transcription initiation factor IIB-2; AltName:
            Full=General transcription factor TFIIB-2; Short=AtTFIIB2
            gi|6056193|gb|AAF02810.1|AC009400_6 transcription
            initiation factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
            [Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
            AT3g10330/F14P13_7 [Arabidopsis thaliana]
            gi|21593436|gb|AAM65403.1| transcription initiation
            factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
            gi|332641371|gb|AEE74892.1| transcription initiation
            factor IIB-2 [Arabidopsis thaliana]
          Length = 312

 Score =  451 bits (1159), Expect = e-124
 Identities = 220/313 (70%), Positives = 262/313 (83%), Gaps = 3/313 (0%)
 Frame = +3

Query: 267  MSDSYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 446
            MSD++C DCKR+TEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 447  GPVNPLLGDGALTTVISRAANGSNAD---SSLARLQNRGGDPDRAIVLAFKAISNMADRL 617
            GP NPLL DG LTTVIS+  NGS+ D   SSL R QNRG +PDR +++AFK I+ MADRL
Sbjct: 61   GPTNPLLADGGLTTVISKP-NGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRL 119

Query: 618  SLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGAT 797
             LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GAT
Sbjct: 120  GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 179

Query: 798  KKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGD 977
            KKEIGRAKE+IVKQL +E G+ +EMGTIHAGD++RRFCSNLGM+N+ VKA QE+VQK+ +
Sbjct: 180  KKEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEE 239

Query: 978  FDXXXXXXXXXXXXXFMVTQLSESKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIPEW 1157
            FD             +++TQLS+ KKPLRDIS+AT VAEGTI+N+Y+DLYPH +KIIP W
Sbjct: 240  FDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAW 299

Query: 1158 YAKERDLKNLSSP 1196
            YAKE DLKNL SP
Sbjct: 300  YAKEEDLKNLQSP 312


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
            sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
            transcription initiation factor IIB-2-like [Cucumis
            sativus]
          Length = 312

 Score =  444 bits (1143), Expect = e-122
 Identities = 214/312 (68%), Positives = 257/312 (82%), Gaps = 2/312 (0%)
 Frame = +3

Query: 267  MSDSYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 446
            MSD++C DCKR TEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 447  GPVNPLLGDGALTTVISR--AANGSNADSSLARLQNRGGDPDRAIVLAFKAISNMADRLS 620
            GP NPLL DG L+TVI++     G    SSL R QNRG +PDR ++LAFK I+ M+DRL 
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 621  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 800
            LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 801  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 980
            KEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 981  DXXXXXXXXXXXXXFMVTQLSESKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIPEWY 1160
            D             +++TQLS+ KKPL+DIS+AT VAEGTI+N+Y+DLYPH +KI+P WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWY 300

Query: 1161 AKERDLKNLSSP 1196
            AKE DLKNL SP
Sbjct: 301  AKEEDLKNLCSP 312


>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
            gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
            Full=Transcription initiation factor IIB; AltName:
            Full=General transcription factor TFIIB
            gi|945087|gb|AAB09756.1| transcription factor TFIIB
            [Glycine max]
          Length = 313

 Score =  442 bits (1136), Expect = e-121
 Identities = 214/313 (68%), Positives = 257/313 (82%), Gaps = 3/313 (0%)
 Frame = +3

Query: 267  MSDSYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 446
            MSD++C DCKR TEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DPNRVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 447  GPVNPLLGDGALTTVISRAANGSNAD---SSLARLQNRGGDPDRAIVLAFKAISNMADRL 617
            GP NPLL DG L+TVI++   G   +   SSL R QNRG +PDRA++ AFK I+ M+DRL
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRL 120

Query: 618  SLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGAT 797
             LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GAT
Sbjct: 121  GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 180

Query: 798  KKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGD 977
            KKEIGRAKE+IVKQL +E G ++EMGTIHAGD++RRFCSNL M+N+ VKA QE VQK+ +
Sbjct: 181  KKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVQKSEE 240

Query: 978  FDXXXXXXXXXXXXXFMVTQLSESKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIPEW 1157
            FD             +++TQLS+ KKPL+DIS+AT VAEGTI+N+Y+DLYPH +KIIP W
Sbjct: 241  FDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNW 300

Query: 1158 YAKERDLKNLSSP 1196
            YAKE DLKNL SP
Sbjct: 301  YAKEEDLKNLCSP 313


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|297739630|emb|CBI29812.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  442 bits (1136), Expect = e-121
 Identities = 216/313 (69%), Positives = 260/313 (83%), Gaps = 3/313 (0%)
 Frame = +3

Query: 267  MSDSYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 446
            M+D++C DCK+NTEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 447  GPVNPLLGDGALTTVISRAANGSNAD---SSLARLQNRGGDPDRAIVLAFKAISNMADRL 617
            GP NPLL DG L+TVI++  NG + D   SSL R QNRG +PDR ++LAFK I+ M+DRL
Sbjct: 61   GPSNPLLTDGGLSTVIAKP-NGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRL 119

Query: 618  SLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGAT 797
             LV TIKDRA+EIYK++EDQK TRGRN +AL+AAC+YIACRQE KPRTVKEICS+  GAT
Sbjct: 120  GLVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 179

Query: 798  KKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGD 977
            KKEIGRAKE+IVKQL+ E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+ +
Sbjct: 180  KKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEE 239

Query: 978  FDXXXXXXXXXXXXXFMVTQLSESKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIPEW 1157
            FD             +++TQLS+ KK LRDISIAT VAEGTI+N+Y+DLYPH +KIIP W
Sbjct: 240  FDIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSW 299

Query: 1158 YAKERDLKNLSSP 1196
            YAKE DL+NL SP
Sbjct: 300  YAKEEDLRNLCSP 312