BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004694
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...   448   e-123
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop...   446   e-123
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   444   e-122
ref|XP_002308933.1| predicted protein [Populus trichocarpa] gi|2...   442   e-121
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   442   e-121

>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata] gi|297328501|gb|EFH58920.1| transcription
            initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 312

 Score =  448 bits (1153), Expect = e-123
 Identities = 221/313 (70%), Positives = 262/313 (83%), Gaps = 3/313 (0%)
 Frame = +1

Query: 136  MSDTYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 315
            MSD +C DCKR+TEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 316  GPVNPLLGDAALSTVISRAANGSNVD---TSLTRLQNRGGDPDRALVLAFKTISSMADRL 486
            GP NPLL D  L+TVIS+  NGS+ D   +SL R QNRG +PDR L++AFKTI++MADRL
Sbjct: 61   GPTNPLLADGGLTTVISKP-NGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRL 119

Query: 487  SLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGAT 666
             LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GAT
Sbjct: 120  GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 179

Query: 667  KKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGN 846
            KKEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE+VQK+  
Sbjct: 180  KKEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEE 239

Query: 847  FDXXXXXXXXXXXXXFMITQLSESKKPLRDISIATTVAEGTIKNAYKDLYPHAAKIIPEW 1026
            FD             ++ITQLS+ KKPLRDIS+AT VAEGTI+N+YKDLYPH +KIIP W
Sbjct: 240  FDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAW 299

Query: 1027 YSKERDLKNLSSP 1065
            Y+KE DLKNL SP
Sbjct: 300  YAKEEDLKNLQSP 312


>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
            gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
            Full=Transcription initiation factor IIB-2; AltName:
            Full=General transcription factor TFIIB-2; Short=AtTFIIB2
            gi|6056193|gb|AAF02810.1|AC009400_6 transcription
            initiation factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
            [Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
            AT3g10330/F14P13_7 [Arabidopsis thaliana]
            gi|21593436|gb|AAM65403.1| transcription initiation
            factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
            gi|332641371|gb|AEE74892.1| transcription initiation
            factor IIB-2 [Arabidopsis thaliana]
          Length = 312

 Score =  446 bits (1147), Expect = e-123
 Identities = 220/313 (70%), Positives = 261/313 (83%), Gaps = 3/313 (0%)
 Frame = +1

Query: 136  MSDTYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 315
            MSD +C DCKR+TEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 316  GPVNPLLGDAALSTVISRAANGSNVD---TSLTRLQNRGGDPDRALVLAFKTISSMADRL 486
            GP NPLL D  L+TVIS+  NGS+ D   +SL R QNRG +PDR L++AFKTI++MADRL
Sbjct: 61   GPTNPLLADGGLTTVISKP-NGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRL 119

Query: 487  SLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGAT 666
             LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GAT
Sbjct: 120  GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 179

Query: 667  KKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGN 846
            KKEIGRAKE+IVKQL +E G+ +EMGTIHAGD++RRFCSNLGM+N+ VKA QE+VQK+  
Sbjct: 180  KKEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEE 239

Query: 847  FDXXXXXXXXXXXXXFMITQLSESKKPLRDISIATTVAEGTIKNAYKDLYPHAAKIIPEW 1026
            FD             ++ITQLS+ KKPLRDIS+AT VAEGTI+N+YKDLYPH +KIIP W
Sbjct: 240  FDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAW 299

Query: 1027 YSKERDLKNLSSP 1065
            Y+KE DLKNL SP
Sbjct: 300  YAKEEDLKNLQSP 312


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
            sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
            transcription initiation factor IIB-2-like [Cucumis
            sativus]
          Length = 312

 Score =  444 bits (1143), Expect = e-122
 Identities = 216/312 (69%), Positives = 257/312 (82%), Gaps = 2/312 (0%)
 Frame = +1

Query: 136  MSDTYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 315
            MSD +C DCKR TEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 316  GPVNPLLGDAALSTVISR--AANGSNVDTSLTRLQNRGGDPDRALVLAFKTISSMADRLS 489
            GP NPLL D  LSTVI++     G  + +SL R QNRG +PDR L+LAFKTI++M+DRL 
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 490  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 669
            LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 670  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGNF 849
            KEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+  F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 850  DXXXXXXXXXXXXXFMITQLSESKKPLRDISIATTVAEGTIKNAYKDLYPHAAKIIPEWY 1029
            D             ++ITQLS+ KKPL+DIS+AT VAEGTI+N+YKDLYPH +KI+P WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWY 300

Query: 1030 SKERDLKNLSSP 1065
            +KE DLKNL SP
Sbjct: 301  AKEEDLKNLCSP 312


>ref|XP_002308933.1| predicted protein [Populus trichocarpa] gi|222854909|gb|EEE92456.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  442 bits (1136), Expect = e-121
 Identities = 215/312 (68%), Positives = 256/312 (82%), Gaps = 2/312 (0%)
 Frame = +1

Query: 136  MSDTYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 315
            M D +C DCK++TEVVCDH+AGDTVCSECGLVLE+ SIDETSEWR FA++SGD+DP RVG
Sbjct: 1    MGDAFCSDCKKHTEVVCDHSAGDTVCSECGLVLESHSIDETSEWRIFANESGDNDPVRVG 60

Query: 316  GPVNPLLGDAALSTVISR--AANGSNVDTSLTRLQNRGGDPDRALVLAFKTISSMADRLS 489
            GP NPLL D  LSTVI++   A+G  + TSL R QNRG +PDR L+LAFKTI++M+DRL 
Sbjct: 61   GPTNPLLTDGGLSTVIAKPNGASGDFLSTSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 490  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 669
            LV TIKDRA+EIYK++EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 670  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGNF 849
            KEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMSN  VKA  E V+ +  F
Sbjct: 181  KEIGRAKEYIVKQLGLEAGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQF 240

Query: 850  DXXXXXXXXXXXXXFMITQLSESKKPLRDISIATTVAEGTIKNAYKDLYPHAAKIIPEWY 1029
            D             ++ITQLS+ KKPLRDIS+AT VAEGTI+N+YKDLYPH +KIIP WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPAWY 300

Query: 1030 SKERDLKNLSSP 1065
            + E DLKNLSSP
Sbjct: 301  ANEEDLKNLSSP 312


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|297739630|emb|CBI29812.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  442 bits (1136), Expect = e-121
 Identities = 216/312 (69%), Positives = 258/312 (82%), Gaps = 2/312 (0%)
 Frame = +1

Query: 136  MSDTYCPDCKRNTEVVCDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 315
            M+D +C DCK+NTEVV DH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 316  GPVNPLLGDAALSTVISR--AANGSNVDTSLTRLQNRGGDPDRALVLAFKTISSMADRLS 489
            GP NPLL D  LSTVI++    +G  + +SL R QNRG +PDR L+LAFKTI++M+DRL 
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 490  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 669
            LV TIKDRA+EIYK++EDQK TRGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 670  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGNF 849
            KEIGRAKE+IVKQL+ E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+  F
Sbjct: 181  KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 850  DXXXXXXXXXXXXXFMITQLSESKKPLRDISIATTVAEGTIKNAYKDLYPHAAKIIPEWY 1029
            D             ++ITQLS+ KK LRDISIAT VAEGTI+N+YKDLYPH +KIIP WY
Sbjct: 241  DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWY 300

Query: 1030 SKERDLKNLSSP 1065
            +KE DL+NL SP
Sbjct: 301  AKEEDLRNLCSP 312