BLASTX nr result

ID: Salvia21_contig00004680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004680
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, ...   278   8e-73
ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloro...   271   8e-71
ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycin...   268   8e-70
gb|ACJ83880.1| unknown [Medicago truncatula] gi|388512937|gb|AFK...   263   2e-68
gb|AFK44729.1| unknown [Lotus japonicus]                              262   5e-68

>sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor gi|189096138|pdb|3BBO|P
           Chain P, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|3298443|dbj|BAA31512.1| chloroplast
           ribosomal protein L17 [Nicotiana tabacum]
          Length = 205

 Score =  278 bits (710), Expect = 8e-73
 Identities = 138/176 (78%), Positives = 154/176 (87%), Gaps = 2/176 (1%)
 Frame = +2

Query: 110 FPNGPSSSKLRLSRPKPGPTPLNSFVGLAPLHPIFS--SPDSFSFEFCFPTLDNGGRFFA 283
           F  GPS S+LR+ +PK     L+SFVGLAPLHP+ S  S DS SFE  F  +DNGGR FA
Sbjct: 30  FSCGPSPSRLRICKPKSSSRLLHSFVGLAPLHPLLSLSSQDSTSFEHSFTVIDNGGRVFA 89

Query: 284 MRHGRKVPKLNRPPDQRKALLRGLTTQLLKYGRIKTTRARASAMRKYVDKMVTLAKDGTL 463
           MRHGRKVPKLNRPPDQR+ALLRGLTTQLLK+GRIKTT+ARA A+RKYVDKM+T+AKDG+L
Sbjct: 90  MRHGRKVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTKARARAVRKYVDKMITMAKDGSL 149

Query: 464 HKRRQALGFVYEKQIVHALFAEVGERYGDREGGYTRIIRTLPRRGDNAPMAYIELV 631
           HKRRQALGF+YEKQIVHALFAEV +RYG+R GGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 150 HKRRQALGFIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 205


>ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Vitis
           vinifera]
          Length = 198

 Score =  271 bits (693), Expect = 8e-71
 Identities = 138/169 (81%), Positives = 150/169 (88%), Gaps = 2/169 (1%)
 Frame = +2

Query: 131 SKLRLSRPKPGPTPLNSFVGLAPLHPIFS--SPDSFSFEFCFPTLDNGGRFFAMRHGRKV 304
           S++ L+RPKP P  L SF GLAPL P+ S  SP+S SFE  F  +DNGGR  AMRHGR+V
Sbjct: 31  SRITLTRPKPMPI-LPSFTGLAPLSPLLSLSSPESTSFEHNFTIIDNGGRISAMRHGRRV 89

Query: 305 PKLNRPPDQRKALLRGLTTQLLKYGRIKTTRARASAMRKYVDKMVTLAKDGTLHKRRQAL 484
           PKLNRPPDQR+ALLRGLTTQLLKYGRIKTTRARASAMRKYVDKM+TLAKDG+LHKRRQAL
Sbjct: 90  PKLNRPPDQRRALLRGLTTQLLKYGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQAL 149

Query: 485 GFVYEKQIVHALFAEVGERYGDREGGYTRIIRTLPRRGDNAPMAYIELV 631
           GF+YEKQIVHALFAEV +RYGDR GGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 150 GFIYEKQIVHALFAEVPDRYGDRNGGYTRIIRTLPRRGDNAPMAYIELV 198


>ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycine max]
           gi|255629133|gb|ACU14911.1| unknown [Glycine max]
          Length = 217

 Score =  268 bits (684), Expect = 8e-70
 Identities = 139/178 (78%), Positives = 153/178 (85%), Gaps = 5/178 (2%)
 Frame = +2

Query: 113 PNGPSSS--KLRLSRPKPGPTPLNSFVGLAPLHPIFSSPDSFSFEFC---FPTLDNGGRF 277
           P+ PSSS  KLR+SR KP  + L SF GLAPL+PIF S  S  +  C   F  +DNGGR 
Sbjct: 41  PSSPSSSSTKLRISRTKP-KSLLTSFTGLAPLNPIFLSAPSSEYTGCDHSFTIIDNGGRV 99

Query: 278 FAMRHGRKVPKLNRPPDQRKALLRGLTTQLLKYGRIKTTRARASAMRKYVDKMVTLAKDG 457
            AMRHGR+VPKLNRPPDQR+AL+RGLTTQLLKYGRIKTTRARASA+RKYVDKM+TLAKDG
Sbjct: 100 TAMRHGRRVPKLNRPPDQRRALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDG 159

Query: 458 TLHKRRQALGFVYEKQIVHALFAEVGERYGDREGGYTRIIRTLPRRGDNAPMAYIELV 631
           +LHKRRQALGF+YEKQIVHALFAEV ERYG+R GGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 160 SLHKRRQALGFIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 217


>gb|ACJ83880.1| unknown [Medicago truncatula] gi|388512937|gb|AFK44530.1| unknown
           [Medicago truncatula]
          Length = 214

 Score =  263 bits (672), Expect = 2e-68
 Identities = 136/171 (79%), Positives = 149/171 (87%), Gaps = 1/171 (0%)
 Frame = +2

Query: 122 PSSSKLRLSRPKPGPTPLNSFVGLAPLHPIFSSPDSFS-FEFCFPTLDNGGRFFAMRHGR 298
           PS + LR+SR K   + L SF GL PL PIF+ P  FS F+  F  +DNGGR +AMRHGR
Sbjct: 46  PSPTTLRISRVK-SQSLLPSFTGLRPL-PIFAPPSEFSGFDHGFTVIDNGGRVYAMRHGR 103

Query: 299 KVPKLNRPPDQRKALLRGLTTQLLKYGRIKTTRARASAMRKYVDKMVTLAKDGTLHKRRQ 478
           KVPKLNRPPDQRKAL+RGLTTQLLKYGRIKTTRARASA+RKYVDKM+TLAKDG+LHKRRQ
Sbjct: 104 KVPKLNRPPDQRKALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQ 163

Query: 479 ALGFVYEKQIVHALFAEVGERYGDREGGYTRIIRTLPRRGDNAPMAYIELV 631
           ALGF+YEKQIVHALFAEV ERYG+R GGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 164 ALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 214


>gb|AFK44729.1| unknown [Lotus japonicus]
          Length = 216

 Score =  262 bits (669), Expect = 5e-68
 Identities = 135/176 (76%), Positives = 150/176 (85%), Gaps = 3/176 (1%)
 Frame = +2

Query: 113 PNGPSSSKLRLSRPKPGPTPLNSFVGLAPLHPIF---SSPDSFSFEFCFPTLDNGGRFFA 283
           P+ P S  LR+S+ KP    L SF GLAPLH +    SS +  SF  CF  +DNGGR +A
Sbjct: 44  PSSPPS--LRISKSKPQAL-LPSFTGLAPLHHLSLSSSSSEFNSFSHCFTIIDNGGRVYA 100

Query: 284 MRHGRKVPKLNRPPDQRKALLRGLTTQLLKYGRIKTTRARASAMRKYVDKMVTLAKDGTL 463
           MRHGR+VPKLNRPPDQR+AL+RGLTTQLLKYGRIKTTRARASA+RKYVDKM+TLAKDG+L
Sbjct: 101 MRHGRRVPKLNRPPDQRRALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSL 160

Query: 464 HKRRQALGFVYEKQIVHALFAEVGERYGDREGGYTRIIRTLPRRGDNAPMAYIELV 631
           HKRRQALGF+YEKQIVHALFAEV ERYG+R GGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 161 HKRRQALGFIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 216


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