BLASTX nr result

ID: Salvia21_contig00004555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004555
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   209   2e-52
gb|AAQ54512.1| chlorophyll a/b-binding protein type I [Malus x d...   209   2e-52
ref|XP_002533251.1| chlorophyll A/B binding protein, putative [R...   207   7e-52
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b...   206   2e-51
emb|CAL07974.1| chlorophyll a/b-binding protein, photosystem I [...   205   3e-51

>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
           PREDICTED: chlorophyll a-b binding protein 6A,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  209 bits (532), Expect = 2e-52
 Identities = 102/125 (81%), Positives = 109/125 (87%), Gaps = 2/125 (1%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASVTFGTNAT--TSRFTMSAEWMPGEPRPPYLDGSA 176
           +MSCG+A  A  PSVLSSSKSKFA  V     A   +SRF+MSAEWMPG+PRPPYLDGSA
Sbjct: 6   LMSCGIATTAF-PSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSA 64

Query: 177 PGDFGFDPLGLGAVPENLERFKESEIYHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIP 356
           PGDFGFDPLGLG VPENLERFKESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAA+P
Sbjct: 65  PGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVP 124

Query: 357 GGQAT 371
           GGQAT
Sbjct: 125 GGQAT 129


>gb|AAQ54512.1| chlorophyll a/b-binding protein type I [Malus x domestica]
          Length = 147

 Score =  209 bits (532), Expect = 2e-52
 Identities = 104/127 (81%), Positives = 111/127 (87%), Gaps = 4/127 (3%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASV----TFGTNATTSRFTMSAEWMPGEPRPPYLDG 170
           +MSCG+A  A  PSVLSSSKSKFA S     + G NA+ SRF+MSAEWMPGEPRPPYLDG
Sbjct: 6   LMSCGIATTAF-PSVLSSSKSKFATSAVQLPSIGANAS-SRFSMSAEWMPGEPRPPYLDG 63

Query: 171 SAPGDFGFDPLGLGAVPENLERFKESEIYHCRWAMLAVPGILVPEALGLGNWVKAQEWAA 350
           SAPGDFGFDPL LG VPENLERFKESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAA
Sbjct: 64  SAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAA 123

Query: 351 IPGGQAT 371
           +PGGQAT
Sbjct: 124 VPGGQAT 130


>ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223526931|gb|EEF29136.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 244

 Score =  207 bits (527), Expect = 7e-52
 Identities = 101/124 (81%), Positives = 110/124 (88%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASVTFG-TNATTSRFTMSAEWMPGEPRPPYLDGSAP 179
           +MSCG+A A   PS+LSSSKSKFA+SV     N ++SR TMSA+WMPG+PRPPYLDGSAP
Sbjct: 6   LMSCGIATAF--PSLLSSSKSKFASSVPLPCVNGSSSRITMSADWMPGQPRPPYLDGSAP 63

Query: 180 GDFGFDPLGLGAVPENLERFKESEIYHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPG 359
           GDFGFDPL LG VPENLERFKESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPG
Sbjct: 64  GDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPG 123

Query: 360 GQAT 371
           GQAT
Sbjct: 124 GQAT 127


>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
           [Nicotiana tabacum]
          Length = 245

 Score =  206 bits (523), Expect = 2e-51
 Identities = 101/125 (80%), Positives = 109/125 (87%), Gaps = 2/125 (1%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASVTFGTNATT--SRFTMSAEWMPGEPRPPYLDGSA 176
           +MSCG+AA  V PSVLSSS SKFA +V     A +  SRF+MSAEWMPG+PRPPYLDGSA
Sbjct: 6   LMSCGIAA--VSPSVLSSSYSKFAVAVPVCVGAVSGNSRFSMSAEWMPGQPRPPYLDGSA 63

Query: 177 PGDFGFDPLGLGAVPENLERFKESEIYHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIP 356
           PGDFGFDPLGLG VP NLER+KESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAAIP
Sbjct: 64  PGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIP 123

Query: 357 GGQAT 371
           GGQAT
Sbjct: 124 GGQAT 128


>emb|CAL07974.1| chlorophyll a/b-binding protein, photosystem I [Platanus x
           acerifolia]
          Length = 167

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/126 (81%), Positives = 112/126 (88%), Gaps = 3/126 (2%)
 Frame = +3

Query: 3   IMSCGVAAAAVCPSVLSSSKSKFAASVTFG---TNATTSRFTMSAEWMPGEPRPPYLDGS 173
           + SCGVAA  V PS+LSSSKSKFA +V      +NA+T RFTMSA+WMPG+PRPPYLDGS
Sbjct: 6   LRSCGVAA--VFPSLLSSSKSKFATAVALPGACSNAST-RFTMSADWMPGQPRPPYLDGS 62

Query: 174 APGDFGFDPLGLGAVPENLERFKESEIYHCRWAMLAVPGILVPEALGLGNWVKAQEWAAI 353
           APGDFGFDPL LGAVPENLERFKESE+ HCRWAMLAVPGILVPEALGLGNWVKAQEWAA+
Sbjct: 63  APGDFGFDPLLLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAV 122

Query: 354 PGGQAT 371
           PGGQAT
Sbjct: 123 PGGQAT 128


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