BLASTX nr result

ID: Salvia21_contig00004553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004553
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, ch...   166   6e-39
sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, ch...   164   2e-38
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin...   164   2e-38
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl...   161   1e-37
ref|XP_002311451.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37

>ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
           putative [Ricinus communis] gi|223531409|gb|EEF33243.1|
           Plastid-specific 30S ribosomal protein 3, chloroplast
           precursor, putative [Ricinus communis]
          Length = 180

 Score =  166 bits (419), Expect = 6e-39
 Identities = 75/126 (59%), Positives = 101/126 (80%)
 Frame = +2

Query: 209 PTPQNPSICSYPNKKPLTIPSSSSAATQAIGNEEREKMKVVVKAIERPRLLLKFIWMEKN 388
           P  +N  + ++ + + LT+   +S   + I ++  EK++V VK +E+PRL+LKFIWMEKN
Sbjct: 51  PISRNERLTTFASPEALTVEDKTSETEEPISDDIIEKVEVAVKQVEKPRLVLKFIWMEKN 110

Query: 389 IGIAIDQLIPGGHGTIPVSPYYFWPRKDAWEELKLMIETKTWISQKQKVILLNQATDIIN 568
           IG+A+DQ+IPG HGTIP+SPY+FWPRKDAWEELK  +E+K WISQK+ +ILLNQATDIIN
Sbjct: 111 IGLALDQVIPG-HGTIPLSPYFFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIIN 169

Query: 569 LWQQTG 586
           LWQQ+G
Sbjct: 170 LWQQSG 175


>sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 3;
           Short=PSRP-3; Flags: Precursor
           gi|7578871|gb|AAF64163.1|AF239218_1 plastid-specific
           ribosomal protein 3 precursor [Spinacia oleracea]
          Length = 179

 Score =  164 bits (414), Expect = 2e-38
 Identities = 85/152 (55%), Positives = 107/152 (70%), Gaps = 13/152 (8%)
 Frame = +2

Query: 170 SLVPAKTPQIGISPTP--QNPSICSYPNKK--PLTIPSSSSAATQAIGNE---------E 310
           SL P KTP    +P P   +PS      K    L +   + +    +GNE          
Sbjct: 25  SLKPFKTPAFA-NPKPFFSSPSFSQLKKKNNWSLFVAPETISDVAIMGNEVDIDDDLLVN 83

Query: 311 REKMKVVVKAIERPRLLLKFIWMEKNIGIAIDQLIPGGHGTIPVSPYYFWPRKDAWEELK 490
           +EK+KV+VK +++PRL+LKFIWMEKNIG+A+DQ IPG HGT+P+SPYYFWPRKDAWEELK
Sbjct: 84  KEKLKVLVKPMDKPRLVLKFIWMEKNIGLALDQTIPG-HGTVPLSPYYFWPRKDAWEELK 142

Query: 491 LMIETKTWISQKQKVILLNQATDIINLWQQTG 586
           +++E K WISQKQ +ILLNQATDIINLWQQ+G
Sbjct: 143 VLLENKPWISQKQMIILLNQATDIINLWQQSG 174


>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
           gi|255628049|gb|ACU14369.1| unknown [Glycine max]
          Length = 158

 Score =  164 bits (414), Expect = 2e-38
 Identities = 79/125 (63%), Positives = 98/125 (78%), Gaps = 4/125 (3%)
 Frame = +2

Query: 224 PSICSYPNKKP----LTIPSSSSAATQAIGNEEREKMKVVVKAIERPRLLLKFIWMEKNI 391
           PS+   P+  P    L++ ++ + A  A    + EK+ VVVK  E+PRL+LKFIWMEKNI
Sbjct: 31  PSLSHVPSPTPTRFSLSVSAAETTAFAAPPTPQPEKLGVVVKPTEKPRLVLKFIWMEKNI 90

Query: 392 GIAIDQLIPGGHGTIPVSPYYFWPRKDAWEELKLMIETKTWISQKQKVILLNQATDIINL 571
           GIA+DQ++PG HGTIP+SPYYFWPRKDAWEELK ++E K WISQKQ +ILLNQATDIINL
Sbjct: 91  GIALDQMVPG-HGTIPLSPYYFWPRKDAWEELKELLENKPWISQKQMIILLNQATDIINL 149

Query: 572 WQQTG 586
           WQQ+G
Sbjct: 150 WQQSG 154


>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
           sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
           ribosomal protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 192

 Score =  161 bits (407), Expect = 1e-37
 Identities = 73/100 (73%), Positives = 90/100 (90%)
 Frame = +2

Query: 287 TQAIGNEEREKMKVVVKAIERPRLLLKFIWMEKNIGIAIDQLIPGGHGTIPVSPYYFWPR 466
           + ++ +  +EK+ VVVK +E+PRL+LKFIWMEKNIGIA+DQ+IPG HGTIP+SPYYFWPR
Sbjct: 90  SDSVSSPVKEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPG-HGTIPLSPYYFWPR 148

Query: 467 KDAWEELKLMIETKTWISQKQKVILLNQATDIINLWQQTG 586
           KDAWEELK+++E+K WISQKQ +ILLNQATDIINLWQQ G
Sbjct: 149 KDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGG 188


>ref|XP_002311451.1| predicted protein [Populus trichocarpa] gi|222851271|gb|EEE88818.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  160 bits (405), Expect = 2e-37
 Identities = 72/104 (69%), Positives = 93/104 (89%)
 Frame = +2

Query: 275 SSAATQAIGNEEREKMKVVVKAIERPRLLLKFIWMEKNIGIAIDQLIPGGHGTIPVSPYY 454
           S+AA ++I  +E EK ++VVK +E+PRL+LKF+WMEKNIG+A+DQ+IPG HGT+P+SPY+
Sbjct: 81  SNAAGESIPIQETEKAELVVKQVEKPRLVLKFVWMEKNIGLALDQVIPG-HGTVPLSPYF 139

Query: 455 FWPRKDAWEELKLMIETKTWISQKQKVILLNQATDIINLWQQTG 586
           FWPRKDAWEELK  +E+K WISQK+ +ILLNQATDIINLWQQ+G
Sbjct: 140 FWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSG 183


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