BLASTX nr result

ID: Salvia21_contig00004476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004476
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38395.1| Photosystem II, 22 kDa Protein [Plantago major]       315   1e-83
sp|Q9FPP4.1|PSBS_SOLSG RecName: Full=Photosystem II 22 kDa prote...   313   7e-83
gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nico...   312   9e-83
gb|ABF72923.2| chloroplast chlorophyll a/b-binding protein [Sola...   309   8e-82
gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nico...   309   1e-81

>emb|CAJ38395.1| Photosystem II, 22 kDa Protein [Plantago major]
          Length = 262

 Score =  315 bits (808), Expect = 1e-83
 Identities = 187/268 (69%), Positives = 197/268 (73%), Gaps = 5/268 (1%)
 Frame = -3

Query: 973 MAQTMLLTANPL--LKGEQPSLIQRLKPQPFSQIC---RINTASPLSSSTTTVALFXXXX 809
           MAQTMLL+AN    LK EQP LI+  KP+ FS      R N +  L    TT ALF    
Sbjct: 1   MAQTMLLSANVSAHLKSEQP-LIKTFKPKAFSNFVLPPRTNVSRSLPF--TTYALFKSKT 57

Query: 808 XXXXXXXXXXXXXXXVEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEAITGKGIL 629
                           ED           TKQNELFVGRVAMIGFAASLLGEAITGKGIL
Sbjct: 58  KAPTKAPVVKEKPKV-EDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGIL 116

Query: 628 QQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGRFVDDAPATGLDKAVIAPGKGLR 449
            QLNLETGIPI+EAEP          LGAIGALGDRGRFVD+   TGLDKAVIAPGKG R
Sbjct: 117 AQLNLETGIPIFEAEPLLLFFILFNLLGAIGALGDRGRFVDEP--TGLDKAVIAPGKGFR 174

Query: 448 AALGLGDGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGVPIGELEP 269
           AALGLG GPLFGFTKANELFVGRLAQLGIAFS+IGEI+TGKGALAQLN+ETGVPIGELEP
Sbjct: 175 AALGLGSGPLFGFTKANELFVGRLAQLGIAFSIIGEIVTGKGALAQLNVETGVPIGELEP 234

Query: 268 LLLFNIVFFFVAAINPGTGKFVTDDEED 185
           LLLFNIVFFFVAAINPGTGKFVTD+EED
Sbjct: 235 LLLFNIVFFFVAAINPGTGKFVTDEEED 262


>sp|Q9FPP4.1|PSBS_SOLSG RecName: Full=Photosystem II 22 kDa protein, chloroplastic;
           AltName: Full=CP22; Flags: Precursor
           gi|12082782|gb|AAG48610.1|AF311720_1 photosystem II 22
           kDa protein precursor [Solanum sogarandinum]
          Length = 276

 Score =  313 bits (801), Expect = 7e-83
 Identities = 182/276 (65%), Positives = 198/276 (71%), Gaps = 13/276 (4%)
 Frame = -3

Query: 973 MAQTMLLTANPLLK-GEQPSLIQRLKPQPFSQICRINTASPLSSSTT----------TVA 827
           MAQTMLLTAN  +    + SL++RLKP+P S +   +     SSSTT          TVA
Sbjct: 1   MAQTMLLTANAKVDLRSKESLVERLKPKPLSSLFLPSLPLRFSSSTTNFSSSKFTSTTVA 60

Query: 826 LFXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEAI 647
           LF                   VED           TKQNELFVGRVAMIGFAASLLGEAI
Sbjct: 61  LFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120

Query: 646 TGKGILQQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGRFVDD-APATGLDKAVI 470
           TGKGIL QLNLETGIPIYEAEP          LGAIGALGDRGRF+DD APATGL+KAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVI 180

Query: 469 APGKGLRAALGLGDG-PLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETG 293
            PGK  ++ALGL +G PLFGFTKANELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG
Sbjct: 181 PPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETG 240

Query: 292 VPIGELEPLLLFNIVFFFVAAINPGTGKFVTDDEED 185
           VPI E+EPLLLFNI FFF AAINPGTGKF+TD+EED
Sbjct: 241 VPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276


>gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
          Length = 274

 Score =  312 bits (800), Expect = 9e-83
 Identities = 185/276 (67%), Positives = 203/276 (73%), Gaps = 13/276 (4%)
 Frame = -3

Query: 973 MAQTMLLTANPL--LKGEQPSLIQRLKPQPFSQI------CRINTASPLSSS---TTTVA 827
           MAQTMLLTAN    L+ ++P L++RLKP+P S         +  +AS  SSS   +TTVA
Sbjct: 1   MAQTMLLTANAKVDLRNKEP-LVERLKPKPLSSFFLPSLPLKYPSASSSSSSHFTSTTVA 59

Query: 826 LFXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEAI 647
           LF                    ED           TKQNELFVGRVAMIGFAASLLGEAI
Sbjct: 60  LFKSKAKAPAKKVVPKPKEKV-EDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 118

Query: 646 TGKGILQQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGRFVDD-APATGLDKAVI 470
           TGKGIL QLNLETGIPIYEAEP          LGAIGALGDRG+F+DD  PATGLDKAVI
Sbjct: 119 TGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAVI 178

Query: 469 APGKGLRAALGLGDG-PLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETG 293
            PGKG ++ALGL +G PLFGFTKANELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG
Sbjct: 179 PPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETG 238

Query: 292 VPIGELEPLLLFNIVFFFVAAINPGTGKFVTDDEED 185
           VPI E+EPLLLFNIVFFFVAAINPGTGKFVTD+EE+
Sbjct: 239 VPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274


>gb|ABF72923.2| chloroplast chlorophyll a/b-binding protein [Solanum nigrum]
           gi|295824591|gb|ABF72924.2| chloroplast chlorophyll
           a/b-binding protein [Solanum nigrum]
          Length = 276

 Score =  309 bits (792), Expect = 8e-82
 Identities = 180/276 (65%), Positives = 201/276 (72%), Gaps = 13/276 (4%)
 Frame = -3

Query: 973 MAQTMLLTANPLLK-GEQPSLIQRLKPQPFSQI------CRINTASPLSSST----TTVA 827
           MAQTMLLTAN  +    + SL++RLKP+P S +       R +++S  +SS+    TTVA
Sbjct: 1   MAQTMLLTANAKVDLRSKESLVERLKPKPLSSLFLPSLPLRFSSSSTNASSSKFTSTTVA 60

Query: 826 LFXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEAI 647
           LF                   VED           TKQNELFVGRVAMIGFAASLLGEAI
Sbjct: 61  LFKSKAKAPPKKVAPPKQKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120

Query: 646 TGKGILQQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGRFVDD-APATGLDKAVI 470
           TGKGIL QLNLETGIPIYEAEP          LGAIGALGDRG+FVDD AP TGL+KAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPAPPTGLEKAVI 180

Query: 469 APGKGLRAALGLGDG-PLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETG 293
            PG+  ++ALGL +G PLFGFTKANELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG
Sbjct: 181 PPGRSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETG 240

Query: 292 VPIGELEPLLLFNIVFFFVAAINPGTGKFVTDDEED 185
           VPI E+EPLLLFNI FFF AAINPGTGKF+TD+EED
Sbjct: 241 VPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276


>gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
           gi|186926676|gb|ACC95540.1| chloroplast photosystem II
           22 kDa component [Nicotiana benthamiana]
          Length = 277

 Score =  309 bits (791), Expect = 1e-81
 Identities = 183/278 (65%), Positives = 200/278 (71%), Gaps = 15/278 (5%)
 Frame = -3

Query: 973 MAQTMLLTANPLLK-GEQPSLIQRLKPQPFSQI------CRINTASPLSSST------TT 833
           MAQTMLLTAN  +    + SL++RLKP+P S         +  +AS  SSS+      TT
Sbjct: 1   MAQTMLLTANAKVDLRSKESLVERLKPKPLSSFFLPSLSLKYPSASSSSSSSSSHFTSTT 60

Query: 832 VALFXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGE 653
           VALF                    ED           TKQNELFVGRVAMIGFAASLLGE
Sbjct: 61  VALFKSKAKAPAKKVVPKPKEKV-EDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE 119

Query: 652 AITGKGILQQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGRFVDD-APATGLDKA 476
           AITGKGIL QLNLETGIPIYEAEP          LGAIGALGDRG+F+DD  P TGLDKA
Sbjct: 120 AITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLDKA 179

Query: 475 VIAPGKGLRAALGLGDG-PLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE 299
           VI PGKG ++ALGL +G PLFGFTKANELFVGRLAQLGIAFS+IGEIITGKGALAQLN E
Sbjct: 180 VIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFE 239

Query: 298 TGVPIGELEPLLLFNIVFFFVAAINPGTGKFVTDDEED 185
           TGVPI E+EPLLLFNIVFFFVAAINPGTGKFVTD+EE+
Sbjct: 240 TGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 277


Top