BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004294
         (5360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1883   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1860   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1743   0.0  
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...  1672   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...  1665   0.0  

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1883 bits (4877), Expect = 0.0
 Identities = 1001/1724 (58%), Positives = 1236/1724 (71%), Gaps = 44/1724 (2%)
 Frame = -3

Query: 5202 TEMVGSVRFGFMTDEEVRKQSLVKITNPNLLDILEKPIPGGLYDFAMGPVVDGSECKSCG 5023
            TE V +V+F F TDEEVRK S  KIT+P +LD +++P+PGGLYD A+G + + + C+SCG
Sbjct: 58   TEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQSCG 117

Query: 5022 QQSYNCTGHCGHIELVSPAYXXXXXXXXXXXXNKACFHCFHFRSSKAEAENCVSQLKMIQ 4843
            Q+S+ C GHCGHI+LVS  Y             K CF C HF++S +  +  VSQL++I 
Sbjct: 118  QRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELIS 177

Query: 4842 EGNIVAAKKLSLRRKMVDKKNVDWANIDDDADAEDSQGSRALHSGVVSDG--ENYHGHEK 4669
            +G++V AK            N+D  +  + +  EDS GS    S  V+    +N   H K
Sbjct: 178  KGDVVGAK------------NLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLK 225

Query: 4668 KEAFWDSTLLTESMSVLNDFLXXXXXXXXXXXRSNPKITKPTFGWFHATGISSTQIRANA 4489
            ++  W S    E+MSV+++FL             +P++TKPTFGWFH  G+S  Q RAN 
Sbjct: 226  QQE-WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANV 284

Query: 4488 ILSGRLDVTHSGGGEDRPSSEVLNASD-HSWKDGSDTAEVHSYAASDSXXXXXXXXXXXX 4312
            I   +L+   S   E++ SSEV N +D   W DG DT E HS  A               
Sbjct: 285  IRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLER 344

Query: 4311 KIQNLGLE-AKAKDF-SGPLLPSEVRDILRRLWENESELCSYICDIQHKHDEISKHMADY 4138
            K     +E  K K F SGPLLPSEVRDI+ RLWENE+ELCS+I DI  +    S + A Y
Sbjct: 345  KGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGY 404

Query: 4137 SMFFLETVLVPPIKFRPPAKGGDSVMEHPLTVLLGKVLQANIALGNAHMNNSESSRIISR 3958
            SMFFLET+LVPPIKFRPP+KG  SVMEHP TVLLGKVLQANIALGNAH NNSE S+IISR
Sbjct: 405  SMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISR 464

Query: 3957 WMDLQQSINVLFDSKTANSQSQKDS-MGICQYLEKKEGLFRQKMMGKRVNFACRSVISPD 3781
            WMDLQQSINVLFD KTA  Q Q+D+  GICQ LEKKEG+FRQKMMGKRVNFACRSVISPD
Sbjct: 465  WMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPD 524

Query: 3780 PYLAVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVVNGPDIHPGATTYVDSVSTVKLPK 3601
            PYLAVNEIGIPPYFALRLTYPE+VTPWN  KLR A++NGP+IHPGAT YVD +STVKL  
Sbjct: 525  PYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAV 584

Query: 3600 NKKMRVAISRKLPSSRGVVTQSGKINEHEFEGKTVHRHLQDGDIVLVNRQPTLHKPSIMA 3421
            NKKMR++ISRKLPSSRGVV Q G+ +++EFEGK V+RHLQDGDIVLVNRQPTLHKPSIMA
Sbjct: 585  NKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMA 644

Query: 3420 HVVRVLKGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTK 3241
            HVVRVLKGE+TLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QYIVP++
Sbjct: 645  HVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSR 704

Query: 3240 GDTVRGLIQDHIVAAVLITMKNTFFNRSEFSQLLYGSGVFAAGPGSHPG--DRKVSVLDS 3067
            GD +RGLIQDHIV+AVL+T K+TF  R +++QLLY SG+ ++G GS  G   +KVSVLDS
Sbjct: 705  GDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKPGKKVSVLDS 763

Query: 3066 EGLVESVLPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKIPKNYFAS------- 2908
            E  ++ +LPA+WKPEPLW+GKQVITA+LNHITRG  P T +  GKIP+ YF S       
Sbjct: 764  EDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKS 823

Query: 2907 -------ASYKNGEEDQEHNAEHDLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSA 2749
                   +  +  +  ++ + E+ LLI KNELVRGVIDKAQF K+GLVH VQELYGSN+A
Sbjct: 824  GKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTA 883

Query: 2748 GILLSALSRLFTLFLQFHGFTCGLDDLIILPHFDLQRKEKLE-GEDVGEEVHCDFVKFKP 2572
            GILLS LSRLFT+FLQ HGFTCG+DDL+I P++D+ RK +L+  E++GE VHC F+    
Sbjct: 884  GILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNH 943

Query: 2571 GQIGPEELQLEIEKVICSDRESSTATLDMKMKNKLTNRLTREGSQILKHLLTRGLLKPFP 2392
            G+I P +LQ+E+EK+I S+ E++   LD  MKN+L N LT   S++ K LL +GL+KPFP
Sbjct: 944  GKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNEL-NELT---SKVNKDLLLKGLVKPFP 999

Query: 2391 KNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGF 2212
            KNC+S+MTTTGAKGSTVNF QIS++LGQQ+LEGKRVPRMVSGKTLP FPPWD  ARAGGF
Sbjct: 1000 KNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGF 1059

Query: 2211 ITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDS 2032
            I+DRFL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKVCYDYTVRDS
Sbjct: 1060 ISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDS 1119

Query: 2031 DGSIVQFYYGEDGVDVHKTSFLKNFKALQDNRETICQKFQNQRQFNSYISELPKGLEEEA 1852
            DGSIVQF YG+DGVDVH+TSF+  F+AL  N E +C+KF    +FN YI +LPK L ++ 
Sbjct: 1120 DGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELRKKT 1179

Query: 1851 RCYIHEAQEKSSKKQIXXXXXXXXXXXXXXXXKAFAEEQGFLELVKQKYLWSLAESGEPV 1672
            + +I    E+                          +++ F+ LVKQKY+ SLA+ GEPV
Sbjct: 1180 KKFIEGFMEERQ------------------DFDNMKKQKDFVNLVKQKYISSLAQPGEPV 1221

Query: 1671 GVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFADF 1492
            GV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA++ IKTPI+TCP    
Sbjct: 1222 GVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMG 1281

Query: 1491 RSKRDVVALVSKVKRVSVADLVESMEVRL---SIDPHKVARTYKLKMKLKETEF------ 1339
            RSK D   L +K+K+V+VAD+ ESMEV +   ++  H+    YKLKMKL E         
Sbjct: 1282 RSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTG 1341

Query: 1338 VSSQDMKDTLETVFLYELEDAIENHIIFLSKISGIKNFMSSS---ISGEADEDESGARST 1168
            +S +D ++TLE VF+ ELEDAI+NH++ LSKISGIKNF+  S    S E DED SG    
Sbjct: 1342 ISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLA 1401

Query: 1167 EVXXXXXXXXXXXXXXXXXXXDAQKRKQQASDELDYGDG-SDVDHGEDELSTDTEKRKSD 991
                                 DAQKRKQQASDE+DYGD   + D GE       E    D
Sbjct: 1402 GGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEE---ID 1458

Query: 990  VDLEDMDTSKDDGTDRSDKKEDMDSIQGGSTSGRDLYSGKGFSSKKIKRAVKLEF----- 826
            +  ++++ S ++    SD K++   +   S S ++  +      KK  RA+K +F     
Sbjct: 1459 LVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAIL 1518

Query: 825  ---KGLSYDAHFRFTDEPHILLAQLAQRTAKKVFIKRTGKMSQCRLVQYDPDEKTVIWND 655
               KG  ++ HFRFT+EPHILLAQ+AQ+ A KV+I+ +GK+  C+++  + D+      D
Sbjct: 1519 VKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRD 1578

Query: 654  TKKPKMGENRPEAGADDALYWAMKASGVDFKSLWEMHEDLDLSRLYSNNVHAVLNTYGVE 475
               PK  EN P  G +     A++ +GVDF + W+M ++LD+  +YSNNVHA+LNT+GVE
Sbjct: 1579 ---PKKRENIP--GEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVE 1633

Query: 474  AARGTLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSF 295
            AAR T+I+EV  VF+ YGVK++ RHLSLIAD+MTH+GGYRPM+RHG I+ES+SPF KM+F
Sbjct: 1634 AARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTF 1693

Query: 294  ETASKFIVEAASLGLKDDLETPSSRICLGLPVKVGTGCFDLMQK 163
            ETASKFIVEAAS G+ D+LE+ S+RICLGLPVK+GTGCFDLMQK
Sbjct: 1694 ETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQK 1737


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1860 bits (4818), Expect = 0.0
 Identities = 993/1730 (57%), Positives = 1230/1730 (71%), Gaps = 43/1730 (2%)
 Frame = -3

Query: 5223 SNFLKMATEMVGSVRFGFMTDEEVRKQSLVKITNPNLLDILEKPIPGGLYDFAMGPVVDG 5044
            ++ ++  TE V +V+F F TDEEVRK S  KIT+P +LD +++P+PGGLYD A+G + + 
Sbjct: 2    AHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDEN 61

Query: 5043 SECKSCGQQSYNCTGHCGHIELVSPAYXXXXXXXXXXXXNKACFHCFHFRSSKAEAENCV 4864
            + C+SCGQ+S+ C GHCGHI+LVS  Y             K CF C HF++S +  +  V
Sbjct: 62   TPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYV 121

Query: 4863 SQLKMIQEGNIVAAKKLSLRRKMVDKKNVDWANIDDDADAEDSQGSRALHSGVVSDG--E 4690
            SQL++I +G++V AK            N+D  +  + +  EDS GS    S  V+    +
Sbjct: 122  SQLELISKGDVVGAK------------NLDSISPSESSYPEDSDGSHVSCSSTVNSSARD 169

Query: 4689 NYHGHEKKEAFWDSTLLTESMSVLNDFLXXXXXXXXXXXRSNPKITKPTFGWFHATGISS 4510
            N   H K++  W S    E+MSV+++FL             +P++TKPTFGWFH  G+S 
Sbjct: 170  NCSVHLKQQE-WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSD 228

Query: 4509 TQIRANAILSGRLDVTHSGGGEDRPSSEVLNASDHSWKDGSDTAEVHSYAASDSXXXXXX 4330
             Q RAN I   +L+         RP +            G DT E HS  A         
Sbjct: 229  AQTRANVIRGSKLE---------RPLN------------GVDTDETHSSIAPTDGIQDTV 267

Query: 4329 XXXXXXKIQNLGLE-AKAKDF-SGPLLPSEVRDILRRLWENESELCSYICDIQHKHDEIS 4156
                  K     +E  K K F SGPLLPSEVRDI+ RLWENE+ELCS+I DI  +    S
Sbjct: 268  TKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGAS 327

Query: 4155 KHMADYSMFFLETVLVPPIKFRPPAKGGDSVMEHPLTVLLGKVLQANIALGNAHMNNSES 3976
             + A YSMFFLET+LVPPIKFRPP+KG  SVMEHP TVLLGKVLQANIALGNAH NNSE 
Sbjct: 328  GNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSER 387

Query: 3975 SRIISRWMDLQQSINVLFDSKTANSQSQKDS-MGICQYLEKKEGLFRQKMMGKRVNFACR 3799
            S+IISRWMDLQQSINVLFD KTA  Q Q+D+  GICQ LEKKEG+FRQKMMGKRVNFACR
Sbjct: 388  SKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACR 447

Query: 3798 SVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVVNGPDIHPGATTYVDSVS 3619
            SVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWN  KLR A++NGP+IHPGAT YVD +S
Sbjct: 448  SVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLS 507

Query: 3618 TVKLPKNKKMRVAISRKLPSSRGVVTQSGKINEHEFEGKTVHRHLQDGDIVLVNRQPTLH 3439
            TVKL  NKKMR++ISRKLPSSRGVV Q G+ +++EFEGK V+RHLQDGDIVLVNRQPTLH
Sbjct: 508  TVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLH 567

Query: 3438 KPSIMAHVVRVLKGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQ 3259
            KPSIMAHVVRVLKGE+TLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN Q
Sbjct: 568  KPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQ 627

Query: 3258 YIVPTKGDTVRGLIQDHIVAAVLITMKNTFFNRSEFSQLLYGSGVFAAGPGSHPG--DRK 3085
            YIVP++GD +RGLIQDHIV+AVL+T K+TF  R +++QLLY SG+ ++G GS  G   +K
Sbjct: 628  YIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKPGKK 686

Query: 3084 VSVLDSEGLVESVLPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKIPKNYFAS- 2908
            VSVLDSE  ++ +LPA+WKPEPLW+GKQVITA+LNHITRG  P T +  GKIP+ YF S 
Sbjct: 687  VSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSE 746

Query: 2907 -------------ASYKNGEEDQEHNAEHDLLIWKNELVRGVIDKAQFGKFGLVHTVQEL 2767
                         +  +  +  ++ + E+ LLI KNELVRGVIDKAQF K+GLVH VQEL
Sbjct: 747  IDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQEL 806

Query: 2766 YGSNSAGILLSALSRLFTLFLQFHGFTCGLDDLIILPHFDLQRKEKLE-GEDVGEEVHCD 2590
            YGSN+AGILLS LSRLFT+FLQ HGFTCG+DDL+I P++D+ RK +L+  E++GE VHC 
Sbjct: 807  YGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCK 866

Query: 2589 FVKFKPGQIGPEELQLEIEKVICSDRESSTATLDMKMKNKLTNRLTREGSQILKHLLTRG 2410
            F+    G+I P +LQ+E+EK+I S+ E++   LD  MKN+L N LT   S++ K LL +G
Sbjct: 867  FIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNEL-NELT---SKVNKDLLLKG 922

Query: 2409 LLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYT 2230
            L+KPFPKNC+S+MTTTGAKGSTVNF QIS++LGQQ+LEGKRVPRMVSGKTLP FPPWD  
Sbjct: 923  LVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCA 982

Query: 2229 ARAGGFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYD 2050
            ARAGGFI+DRFL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKVCYD
Sbjct: 983  ARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYD 1042

Query: 2049 YTVRDSDGSIVQFYYGEDGVDVHKTSFLKNFKALQDNRETICQKFQNQRQFNSYISELPK 1870
            YTVRDSDGSIVQF YG+DGVDVH+TSF+  F+AL  N E +C+KF    +FN YI +LPK
Sbjct: 1043 YTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPK 1102

Query: 1869 GLEEEARCYIHEAQEKSSKKQIXXXXXXXXXXXXXXXXKAFAEEQGFLELVKQKYLWSLA 1690
             L ++ + +I    E+                          +++ F+ LVKQKY+ SLA
Sbjct: 1103 ELRKKTKKFIEGFMEERQ------------------DFDNMKKQKDFVNLVKQKYISSLA 1144

Query: 1689 ESGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILT 1510
            + GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA++ IKTPI+T
Sbjct: 1145 QPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMT 1204

Query: 1509 CPFADFRSKRDVVALVSKVKRVSVADLVESMEVRL---SIDPHKVARTYKLKMKLKETEF 1339
            CP    RSK D   L +K+K+V+VAD+ ESMEV +   ++  H+    YKLKMKL E   
Sbjct: 1205 CPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPAL 1264

Query: 1338 ------VSSQDMKDTLETVFLYELEDAIENHIIFLSKISGIKNFMSSS---ISGEADEDE 1186
                  +S +D ++TLE VF+ ELEDAI+NH++ LSKISGIKNF+  S    S E DED 
Sbjct: 1265 YPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDA 1324

Query: 1185 SGARSTEVXXXXXXXXXXXXXXXXXXXDAQKRKQQASDELDYGDG-SDVDHGEDELSTDT 1009
            SG                         DAQKRKQQASDE+DYGD   + D GE       
Sbjct: 1325 SGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTE 1384

Query: 1008 EKRKSDVDLEDMDTSKDDGTDRSDKKEDMDSIQGGSTSGRDLYSGKGFSSKKIKRAVKLE 829
            E    D+  ++++ S ++    SD K++   +   S S ++  +      KK  RA+K +
Sbjct: 1385 E---IDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKD 1441

Query: 828  F--------KGLSYDAHFRFTDEPHILLAQLAQRTAKKVFIKRTGKMSQCRLVQYDPDEK 673
            F        KG  ++ HFRFT+EPHILLAQ+AQ+ A KV+I+ +GK+  C+++  + D+ 
Sbjct: 1442 FDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQV 1501

Query: 672  TVIWNDTKKPKMGENRPEAGADDALYWAMKASGVDFKSLWEMHEDLDLSRLYSNNVHAVL 493
                 D   PK  EN P  G +     A++ +GVDF + W+M ++LD+  +YSNNVHA+L
Sbjct: 1502 IYYGRD---PKKRENIP--GEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAML 1556

Query: 492  NTYGVEAARGTLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSP 313
            NT+GVEAAR T+I+EV  VF+ YGVK++ RHLSLIAD+MTH+GGYRPM+RHG I+ES+SP
Sbjct: 1557 NTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSP 1616

Query: 312  FLKMSFETASKFIVEAASLGLKDDLETPSSRICLGLPVKVGTGCFDLMQK 163
            F KM+FETASKFIVEAAS G+ D+LE+ S+RICLGLPVK+GTGCFDLMQK
Sbjct: 1617 FSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQK 1666


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1743 bits (4514), Expect = 0.0
 Identities = 959/1745 (54%), Positives = 1195/1745 (68%), Gaps = 58/1745 (3%)
 Frame = -3

Query: 5223 SNFLKMATEMVGSVRFGFMTDEEVRKQSLVKITNPNLLDILEKPIPGGLYDFAMGPVVDG 5044
            S+  K ATE + S+ F F+TDEEVRK S VKITNP LLD++E+P+PGGLYD A+GP+ + 
Sbjct: 5    SSVSKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSER 64

Query: 5043 SECKSCGQQSYNCTGHCGHIELVSPAYXXXXXXXXXXXXNKACFHCFHFRSSKAEAENCV 4864
            + CK+CGQ+S NC GHCGHI+LVSP Y             + CF CFHFR  + + E C+
Sbjct: 65   TICKTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCI 124

Query: 4863 SQLKMIQEGNIVAAKKLSLRRKMVDKKNVDWANIDDDADAEDSQGSRALHSGV-VSDGEN 4687
             QL++I +G+IV AK+L       +  +   A   +++D    +    +HSGV  +DGE 
Sbjct: 125  KQLELIVKGDIVGAKRL-------ESVSPSEALYPEESDLSH-ESCPTIHSGVQCNDGE- 175

Query: 4686 YHGHEKKEAFWDSTLLTESMSVLNDFLXXXXXXXXXXXRSNPKITKPTFGWFHATGISST 4507
               H +++  W S   TE+MSVLN+FL            SNP ITKPTFGWFH +G+S  
Sbjct: 176  ---HTRQQG-WTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDA 231

Query: 4506 QIRANAILSGRLDVTHSGGGEDRPSSEVLNASDHSWKDGSDTAEVHSYAASDSXXXXXXX 4327
             IRAN I        H  GG     SE+   +D   +D ++  + HS             
Sbjct: 232  SIRANVITG------HQLGG--LLGSEIEGTTDV--EDAAEPGDQHSGTKKHKKKERK-- 279

Query: 4326 XXXXXKIQNLGLEAKAKDFSGPLLPSEVRDILRRLWENESELCSYICDIQHKHDEISKHM 4147
                   + L    +   FS  LLPSEV++ L  LW+NE+ +CS+I D+Q +  E  K  
Sbjct: 280  -------EVLEFTRQKSTFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQ--EFGKRK 330

Query: 4146 ADYSMFFLETVLVPPIKFRPPAKGGDSVMEHPLTVLLGKVLQANIALGNAHMNNSESSRI 3967
            A  +MFFLET+LVPPIKFRPP KGGDSVMEHP TVLL KVLQ+NI+LG+AH+N  E S+I
Sbjct: 331  AGPAMFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKI 389

Query: 3966 ISRWMDLQQSINVLFDSKTANSQSQKDSM-GICQYLEKKEGLFRQKMMGKRVNFACRSVI 3790
            + RW+DLQQSIN LFDSKTA    Q++   GICQ LEKKEGLFRQKMMGKRVN+ACRSVI
Sbjct: 390  VRRWLDLQQSINTLFDSKTAKGPGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVI 449

Query: 3789 SPDPYLAVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVVNGPDIHPGATTYVDSVSTVK 3610
            SPDPY+ VNEIGIPP FA++LTYPERVTPWN  KLR AV+NG + HPGAT YVD +S  K
Sbjct: 450  SPDPYIGVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINK 509

Query: 3609 LPKNKKMRVAISRKLPSSRGVVTQSGKINEHEFEGKTVHRHLQDGDIVLVNRQPTLHKPS 3430
            LP  +K R++ISRKLPSSRG VTQ+GK +E EFEGK V+RHLQDGD+VLVNRQPTLHKPS
Sbjct: 510  LPPARKARISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPS 569

Query: 3429 IMAHVVRVLKGERTLRMHYANCS-SYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYI 3253
            IMAHVVRVLKGE+TLRMHYANCS +YNADFDGDE+NVHFPQDE+SRAEAYNIVNAN Q++
Sbjct: 570  IMAHVVRVLKGEKTLRMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFV 629

Query: 3252 VPTKGDTVRGLIQDHIVAAVLITMKNTFFNRSEFSQLLYGSGVFAAGPGSHPG--DRKVS 3079
             P+ G+ +RGLIQDHIV+AVL+T K+TF ++ EF+QLLY SGV   GP S  G   +KV 
Sbjct: 630  RPSNGEPLRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVL 689

Query: 3078 VLDSEGLVESVLPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKIPKNYFASASY 2899
               SE  ++++ PA+WKP+PLWTGKQVITA+LNHIT    P TV+   KIP N+F S + 
Sbjct: 690  WSRSEDEIQTLPPAIWKPKPLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRAN 749

Query: 2898 KNG---EEDQEHNA-------EHDLLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSA 2749
            ++    EE  + +A       E  +L++KNELVRGVIDK QFG++GLVHTV EL GS++A
Sbjct: 750  EDKPCQEEKSDKDAPAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTA 809

Query: 2748 GILLSALSRLFTLFLQFHGFTCGLDDLIILPHFDLQRKEKLEG-EDVGEEVHCDFVKFKP 2572
            GILLS LSRLFT +LQ HGFTCG+DDL+IL + D +RK++LE  E  GE VH +F+  K 
Sbjct: 810  GILLSVLSRLFTAYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKD 869

Query: 2571 GQI--GPEELQLEIEKVICSDRESSTATLDMKMKNKLTNRLTREGSQILKHLLTRGLLKP 2398
             +I   P  +QL IEK I SD +S+ A LD +M N+L    T+  S ++ +LL+ GLLKP
Sbjct: 870  EKIKIDPVAMQLNIEKTIRSDGDSALAYLDRQMSNELN---TKTSSGVISNLLSDGLLKP 926

Query: 2397 FPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAG 2218
              KNCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP F PWD+ AR+G
Sbjct: 927  SGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSG 986

Query: 2217 GFITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVR 2038
            G+ITDRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YD+TVR
Sbjct: 987  GYITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVR 1046

Query: 2037 DSDGSIVQFYYGEDGVDVHKTSFLKNFKALQDNRETICQKFQNQR-QFNSYISELPKGLE 1861
            D+DGS+VQFYYGEDGVDVH+TSF+  FK L  N++ I ++   Q   FNSYISELP+ L+
Sbjct: 1047 DADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQLGAFNSYISELPEALK 1106

Query: 1860 EEARCYIHEAQEKSSKKQIXXXXXXXXXXXXXXXXKAFAEEQGFLELVKQKYLWSLAESG 1681
            E+A  ++ +                              + +    L+KQK+L SLA+ G
Sbjct: 1107 EKADRFLDDFS------------------IMGRIASNLVKREDLYNLMKQKFLLSLAQPG 1148

Query: 1680 EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPF 1501
            EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS  IKTPI+TCP 
Sbjct: 1149 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIMTCPL 1208

Query: 1500 ADFRSKRDVVALVSKVKRVSVADLVESMEVRL---SIDPHKVARTYKLKMKLKETEF--- 1339
             + R+  D   L  K+++V+VAD+VESMEV +   +I    V R YKLKMKL        
Sbjct: 1209 QEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQ 1268

Query: 1338 ---VSSQDMKDTLETVFLYELEDAIENHIIFLSKISGIKNFMSSS---ISGEADEDESGA 1177
               +S +D ++TLE VFL ELEDAI+NH+  LS+ISGIK+F+  S    SGEADED +G 
Sbjct: 1269 YANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGD 1328

Query: 1176 RSTEVXXXXXXXXXXXXXXXXXXXDAQKRKQQASDELDYGDG--SDVDHGEDELSTDTEK 1003
             S                      DAQKRK QA+DE+DY DG   +++ GE   S +   
Sbjct: 1329 MSHREERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESG 1388

Query: 1002 RKSDVDLEDMDT--SKDDGTDRS--------------DKKEDMDSIQGGSTSG----RDL 883
             +S++D  D +T  S D   D                 KK+  +S   G  S     +  
Sbjct: 1389 FESEIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPK 1448

Query: 882  YSGKGFSSKKIKRAVKLEFKGLSYDAHFRFTDEPHILLAQLAQRTAKKVFIKRTGKMSQC 703
               K   SK   RA+ +E + + ++ HF+FT+EPHILLA++AQ+TAKKV+I+  GK+ QC
Sbjct: 1449 AKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQC 1508

Query: 702  RLVQYDPDEKTVIWNDTK-----KPKMGENRPEAGADDALYWAMKASGVDFKSLWEMHED 538
            R+      +      D K     KP + E  P          A+ A+GVDF + W+M + 
Sbjct: 1509 RVTDCKESQVIYYGKDPKERVDLKPDVKEKVP----------ALHATGVDFNTFWKMQDH 1558

Query: 537  LDLSRLYSNNVHAVLNTYGVEAARGTLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGY 358
            LD+  +YSNN+HA+L TYGVEAAR T+IRE+  VF  YG+ +  RHLSLIAD+MTHTGGY
Sbjct: 1559 LDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGY 1618

Query: 357  RPMSRHGSISESLSPFLKMSFETASKFIVEAASLGLKDDLETPSSRICLGLPVKVGTGCF 178
            RPMSR G I+ES+SPF KMSFETASKFIVEAA  G  D+LETPS+RICLGLPVK+GTG F
Sbjct: 1619 RPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSF 1678

Query: 177  DLMQK 163
            DLMQK
Sbjct: 1679 DLMQK 1683


>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score = 1672 bits (4330), Expect = 0.0
 Identities = 919/1724 (53%), Positives = 1157/1724 (67%), Gaps = 43/1724 (2%)
 Frame = -3

Query: 5205 ATEMVGSVRFGFMTDEEVRKQSLVKITNPNLLDILEKPIPGGLYDFAMGPVVDGSECKSC 5026
            AT  V +V F F+TD+E+R+ S VKIT+P L+D L  P+P GLYD A+GP  D S CKSC
Sbjct: 8    ATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDDKSLCKSC 67

Query: 5025 GQQSYNCTGHCGHIELVSPAYXXXXXXXXXXXXNKACFHCFHFRSSKAEAENCVSQLKMI 4846
            GQ S +C GH GHIELVSP Y             + CF C HFR+   E +   SQL++I
Sbjct: 68   GQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIRTSQLELI 127

Query: 4845 QEGNIVAAKKLSLRRKMVDKKNVDWANIDDDADAEDSQGSRALHSGVVSDGENYHGHEKK 4666
             +G+I+ AK+L     ++  K+VD  N D+           ++H G   + + Y   +  
Sbjct: 128  MKGDIIRAKRLE---SIIPGKSVDSFNPDE-----------SIHPGDGDESQCYSAEQLG 173

Query: 4665 EAFWDSTLLTESMSVLNDFLXXXXXXXXXXXRSNPKITKPTFGWFHATGISSTQIRANAI 4486
            E  W S   +E+MSVL   L             NPKI+KPTFGWFH   +S+ + RA+ I
Sbjct: 174  EN-WTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTI 232

Query: 4485 LSGRLDVTHS----GGGEDRPSSEVLNASDHSWKDGSDTAEVHSYAASDSXXXXXXXXXX 4318
             S   + T+     GGG+     ++ +A   + K      E  SY               
Sbjct: 233  RSVESETTNDDISLGGGDTTDVEDITSAG--TAKRDKRKKEKLSYKL------------- 277

Query: 4317 XXKIQNLGLEAKAKDFSGPLLPSEVRDILRRLWENESELCSYICDIQHKHDEISKHMADY 4138
                      A+    SG LLPS+V+ IL  LWENE+ LCSYI DIQ   D+     A +
Sbjct: 278  ----------AEQNKLSGSLLPSQVKGILELLWENEARLCSYINDIQ---DQGFGKKAGH 324

Query: 4137 SMFFLETVLVPPIKFRPPAKGGDSVMEHPLTVLLGKVLQANIALGNAHMNNSESSRIISR 3958
            SMFFLE + VPPIKFRPP KGGD+VMEHP TVLL KVLQ NI+LG+AH+N S+ S+++SR
Sbjct: 325  SMFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSR 384

Query: 3957 WMDLQQSINVLFDSKTANSQSQKD-SMGICQYLEKKEGLFRQKMMGKRVNFACRSVISPD 3781
            WMDLQQS+N+LFD+KTA+ +S++D + GICQ LEKKEG+FRQKMMGKRVNFACRSVISPD
Sbjct: 385  WMDLQQSVNMLFDNKTASGESKRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPD 444

Query: 3780 PYLAVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVVNGPDIHPGATTYVDSVSTVKLPK 3601
            PYLAVNEIGIPPYFALRL+YPERVTPWN  KLR A++NGP+ HPGAT Y D VS VKLP 
Sbjct: 445  PYLAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPP 504

Query: 3600 NKKMRVAISRKLPSSRGVVTQSGKINEHEFEGKTVHRHLQDGDIVLVNRQPTLHKPSIMA 3421
              K+    SRKLP+SRGV+   GKI++HEFEGK V+RHL+DGD+VLVNRQPTLHKPSIMA
Sbjct: 505  KGKLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMA 564

Query: 3420 HVVRVLKGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTK 3241
            H+VRVLKGE+T+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT 
Sbjct: 565  HIVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTS 624

Query: 3240 GDTVRGLIQDHIVAAVLITMKNTFFNRSEFSQLLYGSGVFAAGPGSHPG--DRKVSVLDS 3067
            GD +R LIQDHIV+A L+T K+TF +  EF+QLLY SGV  AG GS  G   +KV + +S
Sbjct: 625  GDPIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNS 684

Query: 3066 EGLVESVLPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKIPKNYFASASYKNGE 2887
            E  +    PA+WKPEPLWTGKQVI+ALL +ITRG  P T +   KIP N+F +   K   
Sbjct: 685  ESEMFLFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTAEKNAKIPSNFFKTQIRKGKR 744

Query: 2886 EDQEHNAEHD------LLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALS 2725
              ++ + + D      LLI+KN+LVRGV+DKAQFG +G++HTVQELYGSN AG LLSALS
Sbjct: 745  YTEDTSKKKDKPDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALS 804

Query: 2724 RLFTLFLQFHGFTCGLDDLIILPHFDLQRKEKLEG-EDVGEEVHCDFVKFK-PGQIGPEE 2551
            RLFT FLQ HGFTCG+DDL++    D++R  +L+  E +G+ VH +F+  K    I P  
Sbjct: 805  RLFTTFLQMHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVT 864

Query: 2550 LQLEIEKVICSDRESSTATLDMKMKNKLTNRLTREGSQILKHLLTRGLLKPFPKNCISVM 2371
            LQL IEK I S+ E++  TLD KM + L +R +   S ILK LL+ G+LKP  KNCIS+M
Sbjct: 865  LQLNIEKKIRSNGEAA-LTLDRKMTSNLNSRTS---SGILKKLLSEGILKPSGKNCISLM 920

Query: 2370 TTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGGFITDRFLS 2191
            TT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLP FPPWD + RAGGFI DRFL+
Sbjct: 921  TTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLT 980

Query: 2190 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDSDGSIVQF 2011
             L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRD+DGSI+QF
Sbjct: 981  ALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQF 1040

Query: 2010 YYGEDGVDVHKTSFLKNFKALQDNRETICQKFQNQRQFNS-YISELPKGLEEEARCYIHE 1834
            +YGEDGVDVH+TSF+  F AL  N+E +   +  Q   +S YI++LP+ LE +A      
Sbjct: 1041 HYGEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDRSSPYINKLPEALEGKA------ 1094

Query: 1833 AQEKSSKKQIXXXXXXXXXXXXXXXXKAFAEEQGFLELVKQKYLWSLAESGEPVGVIAAQ 1654
              EK SK++                     E+  FL L++ KY+  LA+ GEPVGV+A+Q
Sbjct: 1095 --EKFSKQR----------------NLGSMEQADFLRLMEHKYVSCLAQPGEPVGVLASQ 1136

Query: 1653 SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFADFRSKRDV 1474
            SVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEILM A+  IKTP +TCP    +S +D 
Sbjct: 1137 SVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMTCPLRHDKSMKDA 1196

Query: 1473 VALVSKVKRVSVADLVESMEVR---LSIDPHKVARTYKLKMKL------KETEFVSSQDM 1321
            + L  K+K+++VAD+++SM+V    +++   +V   YKL MKL       E   ++  D 
Sbjct: 1197 ICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSKQYPEYTDITLDDW 1256

Query: 1320 KDTLETVFLYELEDAIENHIIFLSKISGIKNF----------MSSSISGEADEDESGARS 1171
            ++TL   F+ ELEDAI+NH+  LSKISGIK F           S        E E   ++
Sbjct: 1257 EETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSESEKKGQN 1316

Query: 1170 TEVXXXXXXXXXXXXXXXXXXXDAQKRKQQASDELDYGDGSDVDHGEDELSTDTE--KRK 997
             +                    DAQKRK Q +DE+DY DG + +  + ELS + E  +  
Sbjct: 1317 NDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGPEEETHDGELSEEIEGDEDG 1376

Query: 996  SDVDLED-----MDTSKDDGTDRSDKKEDMDSIQGGSTSGRDLYSGKGFSSKKIKRAVKL 832
            SDVD  +      D +  +G ++  K + +D  Q      +        ++KK  RA+ +
Sbjct: 1377 SDVDANENYNNVTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEP----TTKKYDRAIFV 1432

Query: 831  EFKGLSYDAHFRFTDEPHILLAQLAQRTAKKVFIKRTGKMSQCRLVQYDPDEKTVIWNDT 652
            E KG  ++ HFRFT EPHILL Q+AQRTAKKV I+  GK+ +C+ +     E  VI+   
Sbjct: 1433 EAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITC--KESGVIYYG- 1489

Query: 651  KKPKMGENRPEAGADD-ALYWAMKASGVDFKSLWEMHEDLDLSRLYSNNVHAVLNTYGVE 475
               K G  R E  A +     A++ SGV FK+ WE+ +DLD+  +YSNNVHA+LN YGVE
Sbjct: 1490 ---KDGRKRIEISASEKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVE 1546

Query: 474  AARGTLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSF 295
            AAR T+IREV+ VF  YG+ ++ RHL+LIAD+MTHTG YRPM+R GSI++S SPF+KM F
Sbjct: 1547 AARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCF 1606

Query: 294  ETASKFIVEAASLGLKDDLETPSSRICLGLPVKVGTGCFDLMQK 163
            ETA  FIVEAA  G  D+LETPS+RICLGLPVK+GTGC DL+QK
Sbjct: 1607 ETAGNFIVEAAYHGQVDNLETPSARICLGLPVKMGTGCHDLIQK 1650


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score = 1665 bits (4312), Expect = 0.0
 Identities = 916/1725 (53%), Positives = 1168/1725 (67%), Gaps = 44/1725 (2%)
 Frame = -3

Query: 5205 ATEMVGSVRFGFMTDEEVRKQSLVKITNPNLLDILEKPIPGGLYDFAMGPVVDGSECKSC 5026
            A+E V  V F FMT+EEVRKQS+VK+T P LLD + +P+ GGLYD AMG + + + CKSC
Sbjct: 8    ASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTLCKSC 67

Query: 5025 GQQSYNCTGHCGHIELVSPAYXXXXXXXXXXXXNKACFHCFHFRSSKAEAENCVSQLKMI 4846
            GQ+ + C GHCGHI+LVSP Y               CF C HFR+ ++  ENC + L++I
Sbjct: 68   GQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLELI 127

Query: 4845 QEGNIVAAKKLSLRRKMVDKKNVDWANIDDDADAEDSQGSRALHSGVVSDGENYHGHEKK 4666
             +G I  AK+L            +W N            SR   S  +   E  +G  + 
Sbjct: 128  LDGEIAKAKELE----------EEWMN----------SKSRTKSSHSMYTYERKNGQPET 167

Query: 4665 EAFWDSTLLTESMSVLNDFLXXXXXXXXXXXRSNPKITKPTFGWFHATGISSTQIRANAI 4486
               W S   +E++SV+  FL             +PKITKPTFGWFH  G++  Q RANAI
Sbjct: 168  ---WTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAI 224

Query: 4485 LSGRLDVTHSGGGEDRPSSEVLNASDHSWKDGSDTA-EVHSYAASDSXXXXXXXXXXXXK 4309
               +  V+ S G E   S E    ++ + +D  D + EV                     
Sbjct: 225  RRSK-PVSVSSGAEGVSSLEEETTTEATVEDFEDVSPEVFMQ------------------ 265

Query: 4308 IQNLGLEAKAKDFS-GPLLPSEVRDILRRLWENESELCSYICDI-QHKHDEISKHMADYS 4135
                      K+FS G LLPSEV+DIL+RLW+NE+ LCS+I DI Q  H     + A +S
Sbjct: 266  ----------KNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQGHG----NKAGHS 311

Query: 4134 MFFLETVLVPPIKFRPPAKGGDSVMEHPLTVLLGKVLQANIALGNAHMNNSESSRIISRW 3955
            MFFLE+VLVPPIKFRPPAKGGDSVMEHP TVLL KVLQ+NI+LGN H N SE S+I+  W
Sbjct: 312  MFFLESVLVPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLW 371

Query: 3954 MDLQQSINVLFDSKTANSQSQKD-SMGICQYLEKKEGLFRQKMMGKRVNFACRSVISPDP 3778
            MDLQQSIN+LFDSK+A    + D S+GICQ LEKKEG+FRQKMMGKRVNFACRSVISPDP
Sbjct: 372  MDLQQSINILFDSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDP 431

Query: 3777 YLAVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVVNGPDIHPGATTYVDSVSTVKL--P 3604
            YLAVNEIGIPPYFALRLTYPERVT WN  KLR A++NGP+ HPGAT Y+D ++TVKL   
Sbjct: 432  YLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLK 491

Query: 3603 KNKKMRVAISRKLPSSRGVVTQSGKINEHEFEGKTVHRHLQDGDIVLVNRQPTLHKPSIM 3424
             ++K R++ISRKLPSSRGVV   G  +++EFEGK V+RHLQDGDIVLVNRQPTLHKPSIM
Sbjct: 492  PSRKSRISISRKLPSSRGVVVDQG-CDDYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIM 550

Query: 3423 AHVVRVLKGERTLRMHYANCS-SYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVP 3247
            AHVVRVLKGE+T+RMHYANCS +YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QY+ P
Sbjct: 551  AHVVRVLKGEKTIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKP 610

Query: 3246 TKGDTVRGLIQDHIVAAVLITMKNTFFNRSEFSQLLYGSGVF---AAGPGSHPGDRKVSV 3076
            T G+ +R LIQDHI++AVL+T K+TF N  EFSQLLY SG+    A      PG +K+  
Sbjct: 611  TSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPG-QKIFT 669

Query: 3075 LDSEGLVESVLPAVWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKIPKNYFASASYK 2896
            LD +  +  VLPAVWKPEPLWTGKQV+TALL+HIT+G  P  V+   KIP+ +F      
Sbjct: 670  LDFDAEMLPVLPAVWKPEPLWTGKQVVTALLDHITQGSPPFFVEKDVKIPRGFFKCRDMG 729

Query: 2895 NGEEDQEHNAEHD-----------LLIWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSA 2749
            N    ++ + + D           LLI+KNELVRGVIDKAQFG +GLVHTVQELYGSN+A
Sbjct: 730  NNSSKKKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTA 789

Query: 2748 GILLSALSRLFTLFLQFHGFTCGLDDLIILPHFDLQRKEKLE-GEDVGEEVHCDFVKFKP 2572
            G+LLS +SRLFT+FLQ HGFTCG+DDL+++   D +R+++L+  E +GE+VH  F+K K 
Sbjct: 790  GLLLSVMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKD 849

Query: 2571 GQ-IGPEELQLEIEKVICSDRESSTATLDMKMKNKLTNRLTREGSQILKHLLTRGLLKPF 2395
            G+ + P  LQL IEK I  + E++  +LD KM ++L  R     S++LK LL+ GLLKP 
Sbjct: 850  GEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNERTGN--SKVLKDLLSEGLLKPS 907

Query: 2394 PKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDYTARAGG 2215
             KNCIS+MTT+GAKG T NFQQIS++LGQQ+LEGKRVPRMVSGKTLP FPPWD+ +RAGG
Sbjct: 908  VKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGG 967

Query: 2214 FITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRD 2035
            FI DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLK+CYD+TVRD
Sbjct: 968  FIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRD 1027

Query: 2034 SDGSIVQFYYGEDGVDVHKTSFLKNFKALQDNRETICQKFQNQ-RQFNSYISELPKGLEE 1858
            +DGS++QF YGEDGVDVHKT+F+  F+AL  N++ + +   +Q  ++N +I+ELP  L E
Sbjct: 1028 ADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVFINELPSALRE 1087

Query: 1857 EARCYIHEAQEKSSKKQIXXXXXXXXXXXXXXXXKAFAEEQGFLELVKQKYLWSLAESGE 1678
            +   +I+ +  K                           ++ F+ L++ KYL SLA+ GE
Sbjct: 1088 KGE-FIYNSLSKDK-------------------VPGLVLKEDFIRLLENKYLSSLAQPGE 1127

Query: 1677 PVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFA 1498
            PVGV+AAQS+GEPSTQMTLNTFH  GRGEMNVTLGI RLQEILMTAS  IKTPI+TCP  
Sbjct: 1128 PVGVLAAQSIGEPSTQMTLNTFHHVGRGEMNVTLGILRLQEILMTASQDIKTPIMTCPLK 1187

Query: 1497 DFRSKRDVVALVSKVKRVSVADLVESMEVRL---SIDPHKVARTYKLKMKLKETE----- 1342
            +  S      L +K+K+++VAD++ESM V +   S    ++   YKL++     E     
Sbjct: 1188 EGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLENNAQH 1247

Query: 1341 -FVSSQDMKDTLETVFLYELEDAIENHIIFLSKISGIKNFMSSSIS-GEADEDESGARST 1168
              +S +D+++TLETVFL ELE  IE  ++ LSKI+GIKNF+  S S G ++ DE  +   
Sbjct: 1248 GHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKNFVPDSQSKGSSEGDEVSSSRQ 1307

Query: 1167 EVXXXXXXXXXXXXXXXXXXXDAQKRKQQASDELDYGDGSDVDHGEDELSTDTEKR---- 1000
            +                    D +K+K QA+DE+DY D S+ D    E ST  E      
Sbjct: 1308 KENDDDDDEGNDLDVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQG 1367

Query: 999  -KSDVDLEDM-----DTSKDDGTDRSDKKEDMDSIQGGSTSGRDLYSGKGFSSKKIKRAV 838
             ++++   DM     D++ ++  +  D  + M   +   TS            K+  R++
Sbjct: 1368 DEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSI 1427

Query: 837  KLEFKGLSYDAHFRFTDEPHILLAQLAQRTAKKVFIKRTGKMSQCRLVQYDPDEKTVIWN 658
             +E K   ++ HF+FT+EPH LL+Q+ QR A+KV I+R+GK+ QC+  Q    E  VI++
Sbjct: 1428 FVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQ--QITCKEGQVIYH 1485

Query: 657  DTKKPKMGENRPEAGADDALYWAMKASGVDFKSLWEMHEDLDLSRLYSNNVHAVLNTYGV 478
                 +    +PE   +     A++ SGVDFK+LWEM ++LD+  +YSN++HA+L TYGV
Sbjct: 1486 GNNLKERKNLKPE---EKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGV 1542

Query: 477  EAARGTLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMS 298
            EAAR T+IRE++ +F  YG+ ++ RHLSL+ADYMTH+GGYRPMSR G IS+S+SPF +M+
Sbjct: 1543 EAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMT 1602

Query: 297  FETASKFIVEAASLGLKDDLETPSSRICLGLPVKVGTGCFDLMQK 163
            FETA KFIV+AA  G  D+LETPSSRICLGLPVK+GTG FDLMQK
Sbjct: 1603 FETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQK 1647