BLASTX nr result

ID: Salvia21_contig00004216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00004216
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA05365.1| high mobility group protein [Solanum tuberosum]        75   5e-12
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ...    75   8e-12
gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirs...    74   1e-11
gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]                 73   2e-11
ref|XP_002306429.1| high mobility group family [Populus trichoca...    73   2e-11

>emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
          Length = 141

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   VGKAGGDRWKSLSEEEKAPYVAEAEKRKEGYERNMEAYNRKLAGG 136
           VGKAGGD+WK LS+EEKAPY A+AEKRK  Y++NM+AYN+KLA G
Sbjct: 67  VGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAG 111


>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
           gi|359491843|ref|XP_003634333.1| PREDICTED: high
           mobility group-like isoform 2 [Vitis vinifera]
           gi|297745562|emb|CBI40727.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   VGKAGGDRWKSLSEEEKAPYVAEAEKRKEGYERNMEAYNRKLAGG 136
           VGKAGGD+WKS+SE EKAPYVA+AEKRK  YE+NM+AYN+K A G
Sbjct: 75  VGKAGGDKWKSMSEAEKAPYVAKAEKRKVEYEKNMKAYNKKQAEG 119


>gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
          Length = 142

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   VGKAGGDRWKSLSEEEKAPYVAEAEKRKEGYERNMEAYNRKLAGG 136
           VGKAGGD+WKSLSE EKAPYVA+AEKRK  YE+NM+AYN++ A G
Sbjct: 66  VGKAGGDKWKSLSEAEKAPYVAKAEKRKVEYEKNMKAYNKRQAEG 110


>gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
          Length = 142

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = +2

Query: 2   VGKAGGDRWKSLSEEEKAPYVAEAEKRKEGYERNMEAYNRKLAGGA 139
           VGKAGGD WK LSE EKAPY A+AEKRK  Y++NM+AYNRK AG A
Sbjct: 67  VGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQAGDA 112


>ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
           gi|222855878|gb|EEE93425.1| high mobility group family
           [Populus trichocarpa]
          Length = 144

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   VGKAGGDRWKSLSEEEKAPYVAEAEKRKEGYERNMEAYNRKLAGG 136
           VGKAGGD+WKSLSE EKAPY A+AEKRK  Y ++M AYN++LAGG
Sbjct: 70  VGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGG 114


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