BLASTX nr result

ID: Salvia21_contig00003848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00003848
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   244   1e-93
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   245   8e-93
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   245   9e-92
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...   223   2e-89
emb|CBI33870.3| unnamed protein product [Vitis vinifera]              225   1e-86

>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Vitis vinifera]
          Length = 372

 Score =  244 bits (622), Expect(2) = 1e-93
 Identities = 118/184 (64%), Positives = 134/184 (72%), Gaps = 17/184 (9%)
 Frame = -3

Query: 850 ESWEPGFVDQAVWATEDDYGMWNGEGSFDTNSNSSYDG----ARSGSEPPNKRSRGSNSG 683
           ++W PG  DQ VWATEDDY +WNG+GS DT SNS+Y+G    +RSGSEPPNK+SR S   
Sbjct: 18  DNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNKKSRNSQVV 77

Query: 682 DGAA----------SNRSKAIGKMFYKTKLCCKFRAGTCPYITNCNFAHSVEELRKPPDN 533
           D             SNRSKAIGKMF+KTKLCCKFRAGTCPY+TNCNFAHS++ELR+PP N
Sbjct: 78  DSQGNVFGRDRDLPSNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPN 137

Query: 532 WQEIVXXXXXXXXXXXXXXXEFQIPIVGVSD---ETQRSYKGRHCKKFYTEEGCPYGENC 362
           WQEIV               EFQIP +G S    ETQRSYKGRHCKKFYT+EGCPYG+NC
Sbjct: 138 WQEIVAAHDEERGVSSEPREEFQIPSIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNC 197

Query: 361 TFLH 350
           TFLH
Sbjct: 198 TFLH 201



 Score =  127 bits (320), Expect(2) = 1e-93
 Identities = 60/99 (60%), Positives = 61/99 (61%)
 Frame = -2

Query: 299 NCTFLHDEQSKARESVAISLXXXXXXXXXXXXXXXXXXXXXXXXPTLKPSNWKTRICNKW 120
           NCTFLHDEQSKARESVAISL                          +KPSNWKTRICNKW
Sbjct: 196 NCTFLHDEQSKARESVAISLGPGAGGGGGGGGGGGGGGGGGGSGSNIKPSNWKTRICNKW 255

Query: 119 ELTGYCPFGSKCHFAHGAAELHNYGGGATDSEAKDPSTP 3
           ELTGYCPFGSKCHFAHG  ELH YGGG  D      S P
Sbjct: 256 ELTGYCPFGSKCHFAHGMGELHRYGGGLVDESRDSTSAP 294


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score =  245 bits (625), Expect(2) = 8e-93
 Identities = 131/203 (64%), Positives = 148/203 (72%), Gaps = 9/203 (4%)
 Frame = -3

Query: 931 MDYRRENRLSSGDVVHVLSGSSRNPVNESWEPGFVDQAVWATEDDYGMWN--GEGSFDTN 758
           MDY      S G+VVHV+SG+S    NE+W PG     VWATED+Y  WN  G+GS DT 
Sbjct: 1   MDY------SGGNVVHVISGTS----NENW-PG----EVWATEDEYRAWNNGGDGSVDTP 45

Query: 757 SNSSYDG----ARSGSEPPNKRSRGSNSGDGAASNRSKAIGKMFYKTKLCCKFRAGTCPY 590
           SNSSYD     +RSGSEPPNK+SR S   D  +SNRSKAIGKMF+KTKLCCKFRAGTCPY
Sbjct: 46  SNSSYDQRQSQSRSGSEPPNKKSRSSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPY 103

Query: 589 ITNCNFAHSVEELRKPPDNWQEIVXXXXXXXXXXXXXXXEFQIPIVGVSD---ETQRSYK 419
           ITNCNFAHS+EELR+PP NWQEIV               EFQIP +G S+   E+QRSYK
Sbjct: 104 ITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYK 163

Query: 418 GRHCKKFYTEEGCPYGENCTFLH 350
           GRHCKKFYTEEGCPYG++CTFLH
Sbjct: 164 GRHCKKFYTEEGCPYGDSCTFLH 186



 Score =  124 bits (310), Expect(2) = 8e-93
 Identities = 60/97 (61%), Positives = 65/97 (67%)
 Frame = -2

Query: 299 NCTFLHDEQSKARESVAISLXXXXXXXXXXXXXXXXXXXXXXXXPTLKPSNWKTRICNKW 120
           +CTFLHDEQSK RESVAISL                         T KPSNWKTRICNKW
Sbjct: 181 SCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGSGNGSNT-KPSNWKTRICNKW 239

Query: 119 ELTGYCPFGSKCHFAHGAAELHNYGGGATDSEAKDPS 9
           ELTGYCPFG+KCHFAHGAAELH YGGG  ++E +D S
Sbjct: 240 ELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSS 276


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score =  245 bits (625), Expect(2) = 9e-92
 Identities = 131/203 (64%), Positives = 148/203 (72%), Gaps = 9/203 (4%)
 Frame = -3

Query: 931 MDYRRENRLSSGDVVHVLSGSSRNPVNESWEPGFVDQAVWATEDDYGMWN--GEGSFDTN 758
           MDY      S G+VVHV+SG+S    NE+W PG     VWATED+Y  WN  G+GS DT 
Sbjct: 1   MDY------SGGNVVHVISGTS----NENW-PG----EVWATEDEYRAWNNGGDGSVDTP 45

Query: 757 SNSSYDG----ARSGSEPPNKRSRGSNSGDGAASNRSKAIGKMFYKTKLCCKFRAGTCPY 590
           SNSSYD     +RSGSEPPNK+SR S   D  +SNRSKAIGKMF+KTKLCCKFRAGTCPY
Sbjct: 46  SNSSYDQRQSQSRSGSEPPNKKSRSSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPY 103

Query: 589 ITNCNFAHSVEELRKPPDNWQEIVXXXXXXXXXXXXXXXEFQIPIVGVSD---ETQRSYK 419
           ITNCNFAHS+EELR+PP NWQEIV               EFQIP +G S+   E+QRSYK
Sbjct: 104 ITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYK 163

Query: 418 GRHCKKFYTEEGCPYGENCTFLH 350
           GRHCKKFYTEEGCPYG++CTFLH
Sbjct: 164 GRHCKKFYTEEGCPYGDSCTFLH 186



 Score =  120 bits (301), Expect(2) = 9e-92
 Identities = 58/97 (59%), Positives = 63/97 (64%)
 Frame = -2

Query: 299 NCTFLHDEQSKARESVAISLXXXXXXXXXXXXXXXXXXXXXXXXPTLKPSNWKTRICNKW 120
           +CTFLHDEQSK RESVAIS                            KPSNWKTRICNKW
Sbjct: 181 SCTFLHDEQSKNRESVAISFGGGGGGGGSGNGS------------NTKPSNWKTRICNKW 228

Query: 119 ELTGYCPFGSKCHFAHGAAELHNYGGGATDSEAKDPS 9
           ELTGYCPFG+KCHFAHGAAELH YGGG  ++E +D S
Sbjct: 229 ELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSS 265


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532956|gb|EEF34722.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 349

 Score =  223 bits (568), Expect(2) = 2e-89
 Identities = 119/198 (60%), Positives = 138/198 (69%), Gaps = 4/198 (2%)
 Frame = -3

Query: 931 MDYRRENRLSSGDVVHVLSGSSRNPVNESWEPGFVDQAV-WATEDDYGMWNG-EGSFD-T 761
           MDY R+N      VVHV+ G+      ++W P   D  V WATEDDY MWN  +G  D T
Sbjct: 1   MDYSRDN------VVHVIPGTGP----DNWLPNSADSGVVWATEDDYQMWNNSDGPNDNT 50

Query: 760 NSNSSYDGARSGSEPPNKRSRGSNSGDGAASNRSKAIGKMFYKTKLCCKFRAGTCPYITN 581
            SNSS+  +RSGSEPPNK+S+ ++       +  K+IGKMF+KTKLCCKFRAGTCPYITN
Sbjct: 51  PSNSSFQ-SRSGSEPPNKKSKNNSQ----ELSSKKSIGKMFFKTKLCCKFRAGTCPYITN 105

Query: 580 CNFAHSVEELRKPPDNWQEIVXXXXXXXXXXXXXXXEFQIP-IVGVSDETQRSYKGRHCK 404
           CNFAHS+EELR+PP NWQEIV               EFQIP I G S E+QRSYKGRHCK
Sbjct: 106 CNFAHSIEELRRPPPNWQEIVAAHEEERGNVMEVREEFQIPSIGGFSGESQRSYKGRHCK 165

Query: 403 KFYTEEGCPYGENCTFLH 350
           KFYTEEGCPYG+NCTFLH
Sbjct: 166 KFYTEEGCPYGDNCTFLH 183



 Score =  134 bits (338), Expect(2) = 2e-89
 Identities = 63/98 (64%), Positives = 67/98 (68%)
 Frame = -2

Query: 299 NCTFLHDEQSKARESVAISLXXXXXXXXXXXXXXXXXXXXXXXXPTLKPSNWKTRICNKW 120
           NCTFLHDEQSK RESVAISL                          +KPSNWKTRICNKW
Sbjct: 178 NCTFLHDEQSKNRESVAISLGPGGYGGGGGGGAGSGNGSGGGSAGNVKPSNWKTRICNKW 237

Query: 119 ELTGYCPFGSKCHFAHGAAELHNYGGGATDSEAKDPST 6
           ELTGYCPFG+KCHFAHGAAELH YGGG  +SE KDPS+
Sbjct: 238 ELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGKDPSS 275


>emb|CBI33870.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score =  225 bits (573), Expect(2) = 1e-86
 Identities = 109/170 (64%), Positives = 125/170 (73%), Gaps = 3/170 (1%)
 Frame = -3

Query: 850 ESWEPGFVDQAVWATEDDYGMWNGEGSFDTNSNSSYDGARSGSEPPNKRSRGSNSGDGAA 671
           ++W PG  DQ VWATEDDY +WNG+GS DT SNS+Y+G +S S   N   R  +      
Sbjct: 18  DNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQS---NVFGRDRD----LP 70

Query: 670 SNRSKAIGKMFYKTKLCCKFRAGTCPYITNCNFAHSVEELRKPPDNWQEIVXXXXXXXXX 491
           SNRSKAIGKMF+KTKLCCKFRAGTCPY+TNCNFAHS++ELR+PP NWQEIV         
Sbjct: 71  SNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGV 130

Query: 490 XXXXXXEFQIPIVGVSD---ETQRSYKGRHCKKFYTEEGCPYGENCTFLH 350
                 EFQIP +G S    ETQRSYKGRHCKKFYT+EGCPYG+NCTFLH
Sbjct: 131 SSEPREEFQIPSIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNCTFLH 180



 Score =  123 bits (309), Expect(2) = 1e-86
 Identities = 60/99 (60%), Positives = 61/99 (61%)
 Frame = -2

Query: 299 NCTFLHDEQSKARESVAISLXXXXXXXXXXXXXXXXXXXXXXXXPTLKPSNWKTRICNKW 120
           NCTFLHDEQSKARESVAISL                          +KPSNWKTRICNKW
Sbjct: 175 NCTFLHDEQSKARESVAISLGPGAGGGGS----------------NIKPSNWKTRICNKW 218

Query: 119 ELTGYCPFGSKCHFAHGAAELHNYGGGATDSEAKDPSTP 3
           ELTGYCPFGSKCHFAHG  ELH YGGG  D      S P
Sbjct: 219 ELTGYCPFGSKCHFAHGMGELHRYGGGLVDESRDSTSAP 257


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