BLASTX nr result
ID: Salvia21_contig00003670
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00003670
(1996 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub... 50 2e-12
ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 45 7e-12
ref|XP_003622730.1| Replication protein A1-like protein [Medicag... 50 6e-11
ref|XP_003622087.1| Replication factor A 51 kDa subunit [Medicag... 47 6e-10
ref|XP_003595821.1| Replication factor A protein [Medicago trunc... 47 4e-06
>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|358347930|ref|XP_003638003.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503881|gb|AES85084.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503938|gb|AES85141.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 566
Score = 50.1 bits (118), Expect(3) = 2e-12
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Frame = -3
Query: 1931 IYLFLQGDR---IHATINTSSLQQIKPLLKEGHVYAIKDFVITNNTMKYKTTESKYKLLL 1761
I++ L D+ I A+ + +I+ ++EG Y I++ ++T N KY+ T+ ++KL L
Sbjct: 42 IHMLLLDDKLGKIQASAKKHLVPRIRSNVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNL 101
Query: 1760 FKHTRVVELDDDTFPNHTFNIKNFGEISSISDVQNVV 1650
+T+ ++D T P + F+ F EI + VV
Sbjct: 102 IDNTKFFKIDAATIPLNHFDFMPFNEILEAEREEKVV 138
Score = 37.7 bits (86), Expect(3) = 2e-12
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 1367 CTLWEQYADKMHEYLCT-EPKMPICIIVQFCRPSIFRG 1257
CTLW YA++M+ +L +P P+ +++Q C+ ++G
Sbjct: 177 CTLWANYAERMNSFLAAHDPSSPVIVLIQQCKLKKYQG 214
Score = 32.0 bits (71), Expect(3) = 2e-12
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = -2
Query: 1578 IVDIMGIVVSSYQPIIKDFNGQQTKLMDIIIEDLE 1474
+VD++G VV + +D NG+++K+MD+ ++D E
Sbjct: 137 VVDVIGQVVERDELKERDVNGRRSKIMDLTLQDSE 171
>ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355522143|gb|AET02597.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 637
Score = 45.4 bits (106), Expect(3) = 7e-12
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Frame = -3
Query: 1964 IFE-NFKYHTKKIYLFLQGD---RIHATINTSSLQQIKPLLKEGHVYAIKDFVITNNTMK 1797
+FE N I++ L D +I A+ + +I+ ++EG Y ++ ++T N K
Sbjct: 30 VFEFNNPNEDNSIHMLLLDDNLGKIQASTKKHWVPRIRSNVEEGSTYDNENVLVTKNDPK 89
Query: 1796 YKTTESKYKLLLFKHTRVVELDDDTFPNHTFNIKNFGEISSISDVQNVV 1650
Y+ T+ +KL L T+ + D T P + F+ F EI + VV
Sbjct: 90 YQVTQHSFKLNLIDKTKFFKFDATTIPLNHFDFMPFNEILEAKREEKVV 138
Score = 40.0 bits (92), Expect(3) = 7e-12
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -3
Query: 1391 NYRGKTMTCTLWEQYADKMHEYLCT-EPKMPICIIVQFCRPSIFRG 1257
++ + + CTLW YA++M+ +L +P P+ +++Q C+ ++G
Sbjct: 169 DFESRRVRCTLWANYAERMNSFLVAHDPSSPVVVLIQHCKLKKYQG 214
Score = 32.3 bits (72), Expect(3) = 7e-12
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = -2
Query: 1578 IVDIMGIVVSSYQPIIKDFNGQQTKLMDIIIEDLE 1474
+VD++G V + KD NG+++K+MD+ ++D E
Sbjct: 137 VVDVIGQAVERDELKEKDVNGRRSKIMDLTLQDFE 171
>ref|XP_003622730.1| Replication protein A1-like protein [Medicago truncatula]
gi|355497745|gb|AES78948.1| Replication protein A1-like
protein [Medicago truncatula]
Length = 542
Score = 50.4 bits (119), Expect(3) = 6e-11
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -3
Query: 1931 IYLFLQGDR---IHATINTSSLQQIKPLLKEGHVYAIKDFVITNNTMKYKTTESKYKLLL 1761
I++ L D+ I A+ + +I+ ++EG Y I++ ++T N KY+ T+ ++KL L
Sbjct: 42 IHMLLLDDKFGKIQASAKKHLVSRIRSNVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNL 101
Query: 1760 FKHTRVVELDDDTFPNHTFNIKNFGEISSISDVQNVVM 1647
T+ ++D T P + F+ F EI + VV+
Sbjct: 102 IDKTKFFKIDATTIPLNHFDFMPFNEILEAEREEKVVV 139
Score = 37.7 bits (86), Expect(3) = 6e-11
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 1367 CTLWEQYADKMHEYLCT-EPKMPICIIVQFCRPSIFRG 1257
CTLW YA++M+ +L +P P+ +++Q C+ ++G
Sbjct: 172 CTLWANYAERMNSFLAAHDPSSPVVVLIQQCKLKKYQG 209
Score = 26.6 bits (57), Expect(3) = 6e-11
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -2
Query: 1530 KDFNGQQTKLMDIIIEDLE 1474
KD NG+++K+MD+ ++D E
Sbjct: 148 KDVNGRRSKIMDLTLQDSE 166
>ref|XP_003622087.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355497102|gb|AES78305.1| Replication factor A 51 kDa
subunit [Medicago truncatula]
Length = 466
Score = 47.0 bits (110), Expect(3) = 6e-10
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = -3
Query: 1907 RIHATINTSSLQQIKPLLKEGHVYAIKDFVITNNTMKYKTTESKYKLLLFKHTRVVELDD 1728
+I A+I + +Q+ ++EG Y I+ F++ N K+K T KYKL L T + +
Sbjct: 10 KIQASIKSKDFKQLGDSIEEGASYTIEKFLVQFNKEKFKPTNHKYKLTLIGSTIITKTSY 69
Query: 1727 DTFPNHTFNIKNFGEISSISD 1665
D + FN F I +D
Sbjct: 70 DKISANLFNFTKFQHIIGGTD 90
Score = 36.2 bits (82), Expect(3) = 6e-10
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 1376 TMTCTLWEQYADKMHEYLCTEPK-MPICIIVQFCRPSIF 1263
T+ CTLW +A++M+ Y+ T PI +++ CR +++
Sbjct: 131 TIICTLWGHFAEQMNSYMSTNGNTFPIVVVMHLCRLNVY 169
Score = 28.1 bits (61), Expect(3) = 6e-10
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 1578 IVDIMGIVVSSYQPIIKDFNGQQTKLMDIIIEDLE 1474
++D++G VV + G+ TK++D+ +EDLE
Sbjct: 94 LMDVIGHVVGTTDIKDVQVKGKMTKILDLTLEDLE 128
>ref|XP_003595821.1| Replication factor A protein [Medicago truncatula]
gi|124360115|gb|ABN08131.1| Nucleic acid-binding,
OB-fold, subgroup [Medicago truncatula]
gi|355484869|gb|AES66072.1| Replication factor A protein
[Medicago truncatula]
Length = 185
Score = 47.4 bits (111), Expect(3) = 4e-06
Identities = 23/74 (31%), Positives = 43/74 (58%)
Frame = -3
Query: 1913 GDRIHATINTSSLQQIKPLLKEGHVYAIKDFVITNNTMKYKTTESKYKLLLFKHTRVVEL 1734
G++IHAT+ + + + + L+EG VY++ F + N Y+TT+ +YKL +T+V
Sbjct: 8 GNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQFNTKVKLC 67
Query: 1733 DDDTFPNHTFNIKN 1692
++ P+ + I N
Sbjct: 68 GKNSVPDDIYPISN 81
Score = 28.9 bits (63), Expect(3) = 4e-06
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -3
Query: 1391 NYRGKTMTCTLWEQYADKMHEYLCTEPKMPICIIVQFCRPSIFRG 1257
NY G TL+ QYAD+++ ++ + ++V + I++G
Sbjct: 126 NYDGFKFKVTLFGQYADELNAFVAAGETNKVIVVVLLAKVKIWQG 170
Score = 21.9 bits (45), Expect(3) = 4e-06
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 1581 YIVDIMGIVVSSYQPIIKDFNGQQTKLM 1498
Y+VD+MG++ + NG +TK++
Sbjct: 94 YLVDVMGMLTGVGMQREYERNGAKTKMV 121