BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00003653
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...   221   6e-56
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   199   2e-49
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   193   1e-47
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   191   7e-47
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              189   3e-46

>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score =  221 bits (562), Expect = 6e-56
 Identities = 99/125 (79%), Positives = 114/125 (91%)
 Frame = +1

Query: 1   QAVCDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNI 180
           Q + DMRKTRQQVSYTGRVGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+GLVSTN+
Sbjct: 125 QTMADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTNV 184

Query: 181 LEHEGILKKFYECGMENLVDDGSCLLDGKHKVFLDGDWVGVCKDSSSFVAKLRRKRRKME 360
           LE E +L++F+ CGME LVDD S +L+GKHK FLDG+WVG+CKDS SFVAKLRRKRR ME
Sbjct: 185 LEQESLLRQFHVCGMEKLVDDTSSVLEGKHKAFLDGEWVGMCKDSKSFVAKLRRKRRMME 244

Query: 361 VPHQI 375
           +P+Q+
Sbjct: 245 MPYQV 249


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron
           macrophyllum]
          Length = 1019

 Score =  199 bits (507), Expect = 2e-49
 Identities = 97/125 (77%), Positives = 104/125 (83%)
 Frame = +1

Query: 1   QAVCDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNI 180
           Q + DMRKTRQQVSYTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLA  GLVSTNI
Sbjct: 324 QTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLAITGLVSTNI 383

Query: 181 LEHEGILKKFYECGMENLVDDGSCLLDGKHKVFLDGDWVGVCKDSSSFVAKLRRKRRKME 360
            EH   L K  + GME LVDD S LL GK KVFLDG+WVGVC DS SFVA LRRKRR+ E
Sbjct: 384 EEH--FLDKLLDSGMEKLVDDTSTLLSGKVKVFLDGNWVGVCGDSVSFVAALRRKRRRKE 441

Query: 361 VPHQI 375
           VPHQ+
Sbjct: 442 VPHQV 446


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  193 bits (491), Expect = 1e-47
 Identities = 89/125 (71%), Positives = 106/125 (84%)
 Frame = +1

Query: 1   QAVCDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNI 180
           Q   D+RKTRQQV+YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAS+GLVST +
Sbjct: 523 QMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTV 582

Query: 181 LEHEGILKKFYECGMENLVDDGSCLLDGKHKVFLDGDWVGVCKDSSSFVAKLRRKRRKME 360
           L  + +L+  + CGM+ LVDD +  L GK KV LDGDWVGVC+DS+ FV+KLRR+RR+ E
Sbjct: 583 L--KPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRQRRRNE 640

Query: 361 VPHQI 375
           VPHQ+
Sbjct: 641 VPHQL 645


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  191 bits (484), Expect = 7e-47
 Identities = 90/125 (72%), Positives = 105/125 (84%)
 Frame = +1

Query: 1   QAVCDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNI 180
           Q   DMRK+RQQV+YTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+GLVST I
Sbjct: 517 QMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTII 576

Query: 181 LEHEGILKKFYECGMENLVDDGSCLLDGKHKVFLDGDWVGVCKDSSSFVAKLRRKRRKME 360
           L  +  L+  + CGM+ LVDD S  L GK KV LDG+WVGVC+DS+ FV+KLRRKRR+ E
Sbjct: 577 L--KPFLETLFRCGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNE 634

Query: 361 VPHQI 375
           VPHQ+
Sbjct: 635 VPHQV 639


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  189 bits (479), Expect = 3e-46
 Identities = 89/125 (71%), Positives = 101/125 (80%)
 Frame = +1

Query: 1   QAVCDMRKTRQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNI 180
           Q   DMRKTRQQV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA  GLVST +
Sbjct: 540 QMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEV 599

Query: 181 LEHEGILKKFYECGMENLVDDGSCLLDGKHKVFLDGDWVGVCKDSSSFVAKLRRKRRKME 360
           L  + ++ K ++CGME LVDD S  L GK+KVFLDGDWVGVC+D  SFV +LR KRR  E
Sbjct: 600 L--DPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKE 657

Query: 361 VPHQI 375
           +P Q+
Sbjct: 658 LPQQV 662