BLASTX nr result

ID: Salvia21_contig00003566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00003566
         (1295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P37218.1|H1_SOLLC RecName: Full=Histone H1 gi|424100|gb|AAA50...   129   2e-27
ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487...   122   3e-25
ref|XP_004140078.1| PREDICTED: histone H1.2-like [Cucumis sativu...   121   4e-25
gb|AAC41651.1| histone H1 [Nicotiana tabacum]                         121   4e-25
dbj|BAA88671.1| histone H1 [Nicotiana tabacum]                        120   6e-25

>sp|P37218.1|H1_SOLLC RecName: Full=Histone H1 gi|424100|gb|AAA50578.1| histone H1
           [Solanum lycopersicum]
          Length = 287

 Score =  129 bits (323), Expect = 2e-27
 Identities = 70/124 (56%), Positives = 84/124 (67%)
 Frame = +2

Query: 134 ATEEPVIPIETEAEQEQPTVEEAVKEDNXXXXXXXXXXXXXXXXXXXXXXXXXSAPTHPP 313
           ATEEPVI  E   EQ  P   E VK++                          + PTHPP
Sbjct: 2   ATEEPVIVNEVVEEQAAP---ETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPP 58

Query: 314 YFEMVQDAIVTLKEKTGSSQYAIQKFIEEKQKTLPSNFRKILLVQLRKFVANDKLVKVKS 493
           YFEM++DAIVTLKE+TGSSQ+AI KFIEEKQK+LPSNF+K+LL QL+KFVA++KLVKVK+
Sbjct: 59  YFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKN 118

Query: 494 SYKL 505
           SYKL
Sbjct: 119 SYKL 122


>ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487|emb|CAA12232.1|
           histone H1 [Solanum lycopersicum]
          Length = 271

 Score =  122 bits (305), Expect = 3e-25
 Identities = 68/124 (54%), Positives = 79/124 (63%)
 Frame = +2

Query: 134 ATEEPVIPIETEAEQEQPTVEEAVKEDNXXXXXXXXXXXXXXXXXXXXXXXXXSAPTHPP 313
           ATEEPV+ IE     E   V E   E+N                         + PTHP 
Sbjct: 2   ATEEPVVAIEPV--NEPMVVAEPATEENPPAETDEPKKEKEIKAKKSSAPRKRNPPTHPS 59

Query: 314 YFEMVQDAIVTLKEKTGSSQYAIQKFIEEKQKTLPSNFRKILLVQLRKFVANDKLVKVKS 493
           YFEM+++AIVTLK+KTGSSQYAI KFIE+KQK LPSNFRK+LL QL+K VA+ KLVKVKS
Sbjct: 60  YFEMIKEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKMLLAQLKKLVASGKLVKVKS 119

Query: 494 SYKL 505
           SYKL
Sbjct: 120 SYKL 123


>ref|XP_004140078.1| PREDICTED: histone H1.2-like [Cucumis sativus]
           gi|449490449|ref|XP_004158609.1| PREDICTED: histone
           H1.2-like [Cucumis sativus]
          Length = 274

 Score =  121 bits (303), Expect = 4e-25
 Identities = 66/124 (53%), Positives = 80/124 (64%)
 Frame = +2

Query: 134 ATEEPVIPIETEAEQEQPTVEEAVKEDNXXXXXXXXXXXXXXXXXXXXXXXXXSAPTHPP 313
           ATEEPV+P+E+ AE   PT  E  +E+                          + PTHPP
Sbjct: 2   ATEEPVVPVESAAE---PTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPP 58

Query: 314 YFEMVQDAIVTLKEKTGSSQYAIQKFIEEKQKTLPSNFRKILLVQLRKFVANDKLVKVKS 493
           Y EM++DAIVTLKE+TGSSQYAI KFIEEKQK LP NF+K+LL  L+K V + KLVKVKS
Sbjct: 59  YEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKS 118

Query: 494 SYKL 505
           S+KL
Sbjct: 119 SFKL 122


>gb|AAC41651.1| histone H1 [Nicotiana tabacum]
          Length = 282

 Score =  121 bits (303), Expect = 4e-25
 Identities = 66/124 (53%), Positives = 80/124 (64%)
 Frame = +2

Query: 134 ATEEPVIPIETEAEQEQPTVEEAVKEDNXXXXXXXXXXXXXXXXXXXXXXXXXSAPTHPP 313
           ATEEP++  E   E      E A +E++                         + PTHP 
Sbjct: 2   ATEEPLVVTEIVTEAVVVEAEPAKEENSPAAEPDEPKKEKEIEAKKPAAPRKRNPPTHPS 61

Query: 314 YFEMVQDAIVTLKEKTGSSQYAIQKFIEEKQKTLPSNFRKILLVQLRKFVANDKLVKVKS 493
           YFEM++DAIVTLK+KTGSSQ+AI KFIE+KQK LPSNFRK+LLVQL+K VA+ KLVKVKS
Sbjct: 62  YFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKVKS 121

Query: 494 SYKL 505
           SYKL
Sbjct: 122 SYKL 125


>dbj|BAA88671.1| histone H1 [Nicotiana tabacum]
          Length = 279

 Score =  120 bits (302), Expect = 6e-25
 Identities = 66/124 (53%), Positives = 79/124 (63%)
 Frame = +2

Query: 134 ATEEPVIPIETEAEQEQPTVEEAVKEDNXXXXXXXXXXXXXXXXXXXXXXXXXSAPTHPP 313
           ATEEPV+  E   E      E A +++                          + PTHP 
Sbjct: 2   ATEEPVVATEIVTEPAVVEAEPAKEDNPPAVESDEPKKEKETKAKKPAAPRKRNPPTHPS 61

Query: 314 YFEMVQDAIVTLKEKTGSSQYAIQKFIEEKQKTLPSNFRKILLVQLRKFVANDKLVKVKS 493
           YFEM++DAIVTLK+KTGSSQ+AI KFIE+KQK LPSNFRK+LLVQL+K VA+ KLVKVKS
Sbjct: 62  YFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKVKS 121

Query: 494 SYKL 505
           SYKL
Sbjct: 122 SYKL 125


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