BLASTX nr result
ID: Salvia21_contig00003545
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00003545
(754 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|2... 182 2e-52
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat... 167 2e-47
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun... 187 3e-45
ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 154 2e-43
ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subun... 154 2e-43
>ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1|
predicted protein [Populus trichocarpa]
Length = 769
Score = 182 bits (462), Expect(2) = 2e-52
Identities = 92/177 (51%), Positives = 117/177 (66%), Gaps = 6/177 (3%)
Frame = -1
Query: 754 NGESILENSLQDVISRYSFMDLWPCSTKDLDHLSRQEWLFKNVNKKIENPAPVNGPSSAD 575
+G S LE+SLQDV+SRYSFMDLWPCS+KDLDHL+RQEWL KN+NKK E A NGP++ D
Sbjct: 498 DGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNINKKAEKSAVSNGPATLD 557
Query: 574 RTIPDIPINSNISGKIVYPDVSRMVIYGPGQK------PGITTPMVSGVSSTLPNGISGG 413
+ + NSN+SGK++YPD S+ VIY P QK P T S+ L N I G
Sbjct: 558 KIPAGLASNSNVSGKVIYPDTSQTVIYDPRQKLEAGIPPSTTASGFKAASNPLSNPI-GL 616
Query: 412 GATAINDTLKSLPPTLAVFVSNLPAVEGPSPDVDFVISICLQSNIPSASVKPSAPQQ 242
++ LK+ PP L F++NLP VEGP+P+VD V+SICLQS++P S Q
Sbjct: 617 APNVFDEVLKATPPALISFLANLPVVEGPAPNVDIVLSICLQSDVPVGKTGKSGTTQ 673
Score = 50.1 bits (118), Expect(2) = 2e-52
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = -2
Query: 153 GKRKGTERQXXXDTSTIQSQPLPKDAFKIRQLQKALA 43
GKRK +RQ +T+T+QSQPLP+D F+IRQ+QK+ A
Sbjct: 708 GKRKDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRA 744
>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
gi|223541464|gb|EEF43014.1| plant RNA cleavage
stimulation factor, putative [Ricinus communis]
Length = 767
Score = 167 bits (424), Expect(2) = 2e-47
Identities = 86/173 (49%), Positives = 109/173 (63%), Gaps = 9/173 (5%)
Frame = -1
Query: 754 NGESILENSLQDVISRYSFMDLWPCSTKDLDHLSRQEWLFKNVNKKIENPAPVNGPSSAD 575
+G S LE SLQDV SRYSFMDLWPCS+KDLDHL+RQEWL KN++KK+E NG D
Sbjct: 496 DGASALEGSLQDVASRYSFMDLWPCSSKDLDHLARQEWLAKNISKKMEKSTISNGLGILD 555
Query: 574 RTIPDIPINSNISGKIVYPDVSRMVIYGPGQKPGITTPM---------VSGVSSTLPNGI 422
R + NS +S K++YPD S M IY P QK + + S SS G+
Sbjct: 556 RVSTGLKSNSAVSAKVIYPDTSSMAIYEPRQKHEVGISLSTTATGFGSASNPSSNTIVGL 615
Query: 421 SGGGATAINDTLKSLPPTLAVFVSNLPAVEGPSPDVDFVISICLQSNIPSASV 263
G GA A ++ LK+ PP L F+S LP VEGP+P+VD V+SICLQS + + +
Sbjct: 616 VGSGANAFDEILKATPPALISFLSTLPTVEGPTPNVDIVLSICLQSELTNGQM 668
Score = 47.8 bits (112), Expect(2) = 2e-47
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2
Query: 153 GKRKGTERQXXXDTSTIQSQPLPKDAFKIRQLQKA 49
GKRK ERQ +T+T+QSQPLP+D F+IR QKA
Sbjct: 707 GKRKDIERQEEDETATVQSQPLPRDIFRIRHSQKA 741
>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
gi|297736046|emb|CBI24084.3| unnamed protein product
[Vitis vinifera]
Length = 769
Score = 187 bits (474), Expect = 3e-45
Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 10/169 (5%)
Frame = -1
Query: 754 NGESILENSLQDVISRYSFMDLWPCSTKDLDHLSRQEWLFKNVNKKIENPAPVNGPSSAD 575
+G + LE+SLQDV+SRYSFMDLWPCS++DLDHL+RQEWL KN+NKK+E A + G S +
Sbjct: 495 DGTTALESSLQDVVSRYSFMDLWPCSSRDLDHLARQEWLAKNINKKVEKSAILKGVGSTE 554
Query: 574 RTIPDIPINSNISGKIVYPDVSRMVIYGPGQKPG------ITTPMVSGVSSTLPNG---- 425
++ NSN + K+ YPD S+MV+Y P QKPG T P++ +S TL N
Sbjct: 555 KSASGFTTNSNPATKVFYPDTSQMVVYDPRQKPGTGALPSTTAPVLPSISGTLSNPSVPM 614
Query: 424 ISGGGATAINDTLKSLPPTLAVFVSNLPAVEGPSPDVDFVISICLQSNI 278
+S A +++ LKS PP L F++NLPAVEGPSPDVD V+SICLQSN+
Sbjct: 615 VSSRPANPLDEILKSTPPALVAFIANLPAVEGPSPDVDVVLSICLQSNV 663
>ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
3-like [Cucumis sativus]
Length = 460
Score = 154 bits (388), Expect(2) = 2e-43
Identities = 80/171 (46%), Positives = 111/171 (64%), Gaps = 4/171 (2%)
Frame = -1
Query: 754 NGESILENSLQDVISRYSFMDLWPCSTKDLDHLSRQEWLFKNVNKKIENPAPVNGPSSAD 575
+G S LE+SLQDV+SRYSFMDLWPC++ DLD+L+RQEWL KN++K E + G D
Sbjct: 189 DGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLD 248
Query: 574 RTIPDIPINSNISGKIVYPDVSRMVIYGPGQKPGI-TTPMVSGVSSTLPNGI---SGGGA 407
+S S K+VYPD S+MVIY P Q GI T SG+ + N + SG
Sbjct: 249 TGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGILPTATASGLPANPSNPVSVASGAPT 308
Query: 406 TAINDTLKSLPPTLAVFVSNLPAVEGPSPDVDFVISICLQSNIPSASVKPS 254
+ ++ LK+ P L F++NLPAV+GP+PDVD V+S+CL+S++P+ + S
Sbjct: 309 SVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLSVCLESDLPTVPLVKS 359
Score = 48.5 bits (114), Expect(2) = 2e-43
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -2
Query: 153 GKRKGTERQXXXDTSTIQSQPLPKDAFKIRQLQKA 49
GKRK +RQ +++T+QSQP+PKD F+IRQ+QKA
Sbjct: 400 GKRKDYDRQEDNESTTVQSQPMPKDXFRIRQIQKA 434
>ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
sativus]
Length = 871
Score = 154 bits (388), Expect(2) = 2e-43
Identities = 80/171 (46%), Positives = 111/171 (64%), Gaps = 4/171 (2%)
Frame = -1
Query: 754 NGESILENSLQDVISRYSFMDLWPCSTKDLDHLSRQEWLFKNVNKKIENPAPVNGPSSAD 575
+G S LE+SLQDV+SRYSFMDLWPC++ DLD+L+RQEWL KN++K E + G D
Sbjct: 600 DGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLD 659
Query: 574 RTIPDIPINSNISGKIVYPDVSRMVIYGPGQKPGI-TTPMVSGVSSTLPNGI---SGGGA 407
+S S K+VYPD S+MVIY P Q GI T SG+ + N + SG
Sbjct: 660 TGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGILPTATASGLPANPSNPVSVASGAPT 719
Query: 406 TAINDTLKSLPPTLAVFVSNLPAVEGPSPDVDFVISICLQSNIPSASVKPS 254
+ ++ LK+ P L F++NLPAV+GP+PDVD V+S+CL+S++P+ + S
Sbjct: 720 SVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLSVCLESDLPTVPLVKS 770
Score = 48.1 bits (113), Expect(2) = 2e-43
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -2
Query: 153 GKRKGTERQXXXDTSTIQSQPLPKDAFKIRQLQKA 49
GKRK +RQ +++T+QSQP+PKD F+IRQ+QKA
Sbjct: 811 GKRKDYDRQEDNESTTVQSQPMPKDFFRIRQIQKA 845