BLASTX nr result

ID: Salvia21_contig00003520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00003520
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90564.1| photosystem I reaction center V (chloroplast) [So...   152   5e-56
gb|AFW90624.1| photosystem I reaction center V (chloroplast) [So...   150   2e-55
ref|XP_002299080.1| hypothetical protein POPTRDRAFT_550669 [Popu...   125   5e-47
ref|XP_002330571.1| hypothetical protein POPTRDRAFT_744851 [Popu...   121   5e-46
gb|ABK95244.1| unknown [Populus trichocarpa]                          121   5e-46

>gb|AFW90564.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  152 bits (383), Expect(2) = 5e-56
 Identities = 82/100 (82%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
 Frame = -3

Query: 515 MASALFSAPSFQGLRPLNKATDSSVVLSKPASAAFRRGSSK-RGLGVKAELNPSLVISLS 339
           MASALFSAP+FQGLRPLNK TDSS+ L+KP   AF+  + K R L VKAELNPS+VISLS
Sbjct: 1   MASALFSAPTFQGLRPLNKPTDSSLFLNKPI--AFKPITKKTRNLAVKAELNPSIVISLS 58

Query: 338 TGLSLFLGRFVFFNFQRENVAKQVPEQNGISHFEAGDVRA 219
           TGLSLFLGRFVFFNFQRENVAKQVP QNGISHFEAGDVRA
Sbjct: 59  TGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRA 98



 Score = 94.0 bits (232), Expect(2) = 5e-56
 Identities = 45/46 (97%), Positives = 46/46 (100%)
 Frame = -1

Query: 139 EAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS 2
           EAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS
Sbjct: 92  EAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS 137


>gb|AFW90624.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  150 bits (378), Expect(2) = 2e-55
 Identities = 81/100 (81%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
 Frame = -3

Query: 515 MASALFSAPSFQGLRPLNKATDSSVVLSKPASAAFRRGSSK-RGLGVKAELNPSLVISLS 339
           MASALFSAP+FQGLRPLNK TDSS+ L+KP   AF+  + K R L VKAELNPS+VISLS
Sbjct: 1   MASALFSAPTFQGLRPLNKPTDSSLFLNKPI--AFKPITKKTRNLAVKAELNPSIVISLS 58

Query: 338 TGLSLFLGRFVFFNFQRENVAKQVPEQNGISHFEAGDVRA 219
           TGLSLFLGRFVFFNFQRENVAKQVP Q+GISHFEAGDVRA
Sbjct: 59  TGLSLFLGRFVFFNFQRENVAKQVPSQDGISHFEAGDVRA 98



 Score = 94.0 bits (232), Expect(2) = 2e-55
 Identities = 45/46 (97%), Positives = 46/46 (100%)
 Frame = -1

Query: 139 EAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS 2
           EAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS
Sbjct: 92  EAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS 137


>ref|XP_002299080.1| hypothetical protein POPTRDRAFT_550669 [Populus trichocarpa]
           gi|118488141|gb|ABK95890.1| unknown [Populus
           trichocarpa] gi|222846338|gb|EEE83885.1| hypothetical
           protein POPTRDRAFT_550669 [Populus trichocarpa]
          Length = 159

 Score =  125 bits (313), Expect(2) = 5e-47
 Identities = 74/117 (63%), Positives = 85/117 (72%)
 Frame = -3

Query: 569 NILFPNPIQSNPNQIKSAMASALFSAPSFQGLRPLNKATDSSVVLSKPASAAFRRGSSKR 390
           ++LF   IQ N + +         S  SFQGLRPL +A  +S  LSK ++AA      KR
Sbjct: 5   SLLFTPTIQKNHHNLTP-------SNLSFQGLRPLTRAKTTS--LSKISTAA-----PKR 50

Query: 389 GLGVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGISHFEAGDVRA 219
            L VKAELNPSLVISLSTG+SLFLGRFVFFNFQRENVAKQVPEQNG++HFEAGD RA
Sbjct: 51  SLAVKAELNPSLVISLSTGVSLFLGRFVFFNFQRENVAKQVPEQNGLTHFEAGDKRA 107



 Score = 90.9 bits (224), Expect(2) = 5e-47
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 139 EAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS 2
           EAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+S
Sbjct: 101 EAGDKRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATAS 146


>ref|XP_002330571.1| hypothetical protein POPTRDRAFT_744851 [Populus trichocarpa]
           gi|118486126|gb|ABK94906.1| unknown [Populus
           trichocarpa] gi|222872129|gb|EEF09260.1| hypothetical
           protein POPTRDRAFT_744851 [Populus trichocarpa]
          Length = 159

 Score =  121 bits (304), Expect(2) = 5e-46
 Identities = 68/90 (75%), Positives = 72/90 (80%)
 Frame = -3

Query: 488 SFQGLRPLNKATDSSVVLSKPASAAFRRGSSKRGLGVKAELNPSLVISLSTGLSLFLGRF 309
           SFQGLRPL KA  +S  LSK    A      KR L VKAELNPSLVISLSTG+SLFLGRF
Sbjct: 25  SFQGLRPLTKAKTAS--LSKITLTA-----PKRSLAVKAELNPSLVISLSTGVSLFLGRF 77

Query: 308 VFFNFQRENVAKQVPEQNGISHFEAGDVRA 219
           VFFNFQRENVAKQVPEQNG++HFEAGD RA
Sbjct: 78  VFFNFQRENVAKQVPEQNGLTHFEAGDERA 107



 Score = 90.9 bits (224), Expect(2) = 5e-46
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 139 EAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS 2
           EAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+S
Sbjct: 101 EAGDERAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATAS 146


>gb|ABK95244.1| unknown [Populus trichocarpa]
          Length = 159

 Score =  121 bits (304), Expect(2) = 5e-46
 Identities = 68/90 (75%), Positives = 72/90 (80%)
 Frame = -3

Query: 488 SFQGLRPLNKATDSSVVLSKPASAAFRRGSSKRGLGVKAELNPSLVISLSTGLSLFLGRF 309
           SFQGLRPL KA  +S  LSK    A      KR L VKAELNPSLVISLSTG+SLFLGRF
Sbjct: 25  SFQGLRPLTKAKTAS--LSKITLTA-----PKRSLAVKAELNPSLVISLSTGVSLFLGRF 77

Query: 308 VFFNFQRENVAKQVPEQNGISHFEAGDVRA 219
           VFFNFQRENVAKQVPEQNG++HFEAGD RA
Sbjct: 78  VFFNFQRENVAKQVPEQNGLTHFEAGDERA 107



 Score = 90.9 bits (224), Expect(2) = 5e-46
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 139 EAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSS 2
           EAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+S
Sbjct: 101 EAGDERAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATAS 146


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