BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00002844
         (1531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, c...   297   6e-78
sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, c...   293   1e-76
emb|CBI34828.3| unnamed protein product [Vitis vinifera]              290   7e-76
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   283   1e-73
ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|1...   280   6e-73

>sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
            Flags: Precursor gi|100388|pir||S12109 ribonucleoprotein,
            28K, precursor - common tobacco gi|19750|emb|CAA37880.1|
            unnamed protein product [Nicotiana sylvestris]
          Length = 276

 Score =  297 bits (760), Expect = 6e-78
 Identities = 156/275 (56%), Positives = 205/275 (74%), Gaps = 8/275 (2%)
 Frame = -2

Query: 1470 STNGCLASSLPSLFTDSKASYSHPFPSIRIKPIKLQISCSCASSIPLSPILRVSVIAAQQ 1291
            +TNGCL S LP  FT +K+  S+PF S ++KPI L  S     S+        + ++   
Sbjct: 2    ATNGCLIS-LPPFFTTTKSISSYPFLSTQLKPISLSSSLPTLLSLNKRTTQFPTFVSVLS 60

Query: 1290 EEDSPVLLEEQD-GRDFSWAEAPDSGETDVFVEPPEEAKLYVGNLPYDVDGVSLAQIFKG 1114
            E+D+ ++L++Q+ G DF  +   ++GET+ + EP E+AKL+VGNLPYD+D   LAQ+F+ 
Sbjct: 61   EDDNTLVLDDQEQGGDFP-SFVGEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQ 119

Query: 1113 AGTVEIVNIICNRETEQSRGFGFVTMSSVVEAEKAVEMFNRYDLNGRLLTVSKAAKRGSK 934
            AG VEI  +I NRET++SRGFGFVTMS+V EA+KAVE++++YDLNGRLLTV+KAA RGS+
Sbjct: 120  AGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSR 179

Query: 933  P-------PARYRIYVGNLPWSVDDARLQQVFSEYGKVVSARVLTDRENGRSRGFGFVVM 775
            P          YRIYVGN+PW +DDARL+QVFSE+GKVVSARV+ DRE+GRSRGFGFV M
Sbjct: 180  PERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTM 239

Query: 774  SSEAELNDAIANLDGMSLDGRAIRVNVAADEPPGN 670
            SSEAE+++AIANLDG +LDGR IRVN A + P  N
Sbjct: 240  SSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRRN 274


>sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
            Precursor gi|19741|emb|CAA40364.1| 31kD chloroplast
            ribonucleoprotein [Nicotiana sylvestris]
            gi|19756|emb|CAA37885.1| unnamed protein product
            [Nicotiana sylvestris]
          Length = 315

 Score =  293 bits (749), Expect = 1e-76
 Identities = 169/304 (55%), Positives = 215/304 (70%), Gaps = 34/304 (11%)
 Frame = -2

Query: 1479 AAKSTNGCLASSLPSLF--TDSKASYSHPFPSIRIKPIKL-QISCSCASSIPLSPILRVS 1309
            ++ +TN CL S LP LF  T    S+++P+ S  +KPIKL  +SC+ +  I LSP  + S
Sbjct: 12   SSMATNSCLIS-LPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTYSPCI-LSPKKKTS 69

Query: 1308 VIAAQQEEDSPVLLEE--------------QDGRDFSWAEAP-DSGETDV---------F 1201
            V A Q+EE++ +L  +              ++  +  + EA  D+GE+D          F
Sbjct: 70   VSALQEEENTLILDGQGQESGDLFNFEPSGEETEEEGFVEAVGDAGESDEVEADEEEEEF 129

Query: 1200 VEPPEEAKLYVGNLPYDVDGVSLAQIFKGAGTVEIVNIICNRETEQSRGFGFVTMSSVVE 1021
             EPPE+AKL+VGNLPYDVD   LA++F+ AG VEI  +I NR+T+QSRGFGFVTMS+V E
Sbjct: 130  QEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEE 189

Query: 1020 AEKAVEMFNRYDLNGRLLTVSKAAKRGSKP--PAR-----YRIYVGNLPWSVDDARLQQV 862
            AEKAVEM+NRYD+NGRLLTV+KAA+RG +P  P R     YRIYVGN+PW +DDARL+Q+
Sbjct: 190  AEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQL 249

Query: 861  FSEYGKVVSARVLTDRENGRSRGFGFVVMSSEAELNDAIANLDGMSLDGRAIRVNVAADE 682
            FSE+GKVVSARV+ DRE GRSRGFGFV M+SEAE++DAIANLDG SLDGR IRVNVA D 
Sbjct: 250  FSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR 309

Query: 681  PPGN 670
               N
Sbjct: 310  SRRN 313


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  290 bits (742), Expect = 7e-76
 Identities = 165/278 (59%), Positives = 191/278 (68%), Gaps = 18/278 (6%)
 Frame = -2

Query: 1458 CLASSLPSLFTDSKASYSHPFPSIRIKPIKL-QISCSCASS-----IPLSPILRVSVIA- 1300
            CL S   +LFT       HP  S+  KP++L  +SCSC+SS        SP   V  +A 
Sbjct: 5    CLTSVPTTLFTTKTP---HPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQ 61

Query: 1299 ----AQQEEDSPVLLEEQDGRDFSWAEAPDSGETDVFVEPPEEAKLYVGNLPYDVDGVSL 1132
                AQQEE+     EE+DG +         G  D + EPPEEAKL+VGNLPYD+D   L
Sbjct: 62   TSDWAQQEEE-----EEKDGEE-------SEGSEDTYSEPPEEAKLFVGNLPYDIDSEKL 109

Query: 1131 AQIFKGAGTVEIVNIICNRETEQSRGFGFVTMSSVVEAEKAVEMFNRYDLNGRLLTVSKA 952
            AQ+F  AG VEI  +I NRET+QSRGFGF+TMS+V EAEKAVEMFNRYDLNGR LTV+KA
Sbjct: 110  AQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKA 169

Query: 951  AKRGSKP-------PARYRIYVGNLPWSVDDARLQQVFSEYGKVVSARVLTDRENGRSRG 793
            A RGS+P          +RIYVGNLPW VDDARL+QVFSE+GKVV ARV+ DR+  RSRG
Sbjct: 170  APRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRG 229

Query: 792  FGFVVMSSEAELNDAIANLDGMSLDGRAIRVNVAADEP 679
            FGFV MSSE ELNDAIA LDG SLDGRAIRVNVA + P
Sbjct: 230  FGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERP 267


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
            vinifera]
          Length = 312

 Score =  283 bits (723), Expect = 1e-73
 Identities = 169/294 (57%), Positives = 195/294 (66%), Gaps = 34/294 (11%)
 Frame = -2

Query: 1458 CLASSLPSLFTDSKASYSHPFPSIRIKPIKL-QISCSCASS-----IPLSPILRVSVIA- 1300
            CL S   +LFT       HP  S+  KP++L  +SCSC+SS        SP   V  +A 
Sbjct: 17   CLTSVPTTLFTTKTP---HPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQ 73

Query: 1299 ----AQQEE---------DSPVLLE-EQDGRDFSW-AEAPDSGET-----DVFVEPPEEA 1180
                AQQEE         DS    E E  G + +W  E  + GE      D + EPPEEA
Sbjct: 74   TSDWAQQEEEEEKGGLTWDSEGGEEIEASGSEEAWEGEVGEDGEESEGSEDTYSEPPEEA 133

Query: 1179 KLYVGNLPYDVDGVSLAQIFKGAGTVEIVNIICNRETEQSRGFGFVTMSSVVEAEKAVEM 1000
            KL+VGNLPYD+D   LAQ+F  AG VEI  +I NRET+QSRGFGF+TMS+V EAEKAVEM
Sbjct: 134  KLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEM 193

Query: 999  FNRYDLNGRLLTVSKAAKRGSKP-------PARYRIYVGNLPWSVDDARLQQVFSEYGKV 841
            FNRYDLNGR LTV+KAA RGS+P          +RIYVGNLPW VDDARL+QVFSE+GKV
Sbjct: 194  FNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKV 253

Query: 840  VSARVLTDRENGRSRGFGFVVMSSEAELNDAIANLDGMSLDGRAIRVNVAADEP 679
            V ARV+ DR+  RSRGFGFV MSSE ELNDAIA LDG SLDGRAIRVNVA + P
Sbjct: 254  VDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERP 307


>ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|118486956|gb|ABK95311.1|
            unknown [Populus trichocarpa] gi|222845826|gb|EEE83373.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  280 bits (717), Expect = 6e-73
 Identities = 156/261 (59%), Positives = 182/261 (69%), Gaps = 16/261 (6%)
 Frame = -2

Query: 1413 SYSHPFPSIRIKPIKLQISCSCASSIPLS----------PILRVSVIAAQQEEDSPVLLE 1264
            S   PF SI  KPIK+  S S  S + L           P++  +   AQQ+E+  V L 
Sbjct: 20   SIKSPFISITSKPIKVVFSTSFPSWVSLKTSNFSTFNTIPLVAQTSDWAQQDEEDTVTLG 79

Query: 1263 EQDGRDFSWAEAPDSGETDVFVEPPEEAKLYVGNLPYDVDGVSLAQIFKGAGTVEIVNII 1084
            E+   D         G  + F EPPEEAKLYVGNLPYDV+  +LAQ+F  AGTVE+  II
Sbjct: 80   EESFGD---------GSEETFPEPPEEAKLYVGNLPYDVNSENLAQLFDQAGTVEVAEII 130

Query: 1083 CNRETEQSRGFGFVTMSSVVEAEKAVEMFNRYDLNGRLLTVSKAAKRGSKP------PAR 922
             NRET+QSRGFGFVTMS+V EAEKA+E F+RYDLNGR LTV+KAA RGS+P         
Sbjct: 131  YNRETDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVNKAAPRGSRPERPSVFKIA 190

Query: 921  YRIYVGNLPWSVDDARLQQVFSEYGKVVSARVLTDRENGRSRGFGFVVMSSEAELNDAIA 742
            YRIYVGNLPW VDDARL+QVFSE+G+VV+ARV+ DRE GRSRGFGFV MSSE ELNDAIA
Sbjct: 191  YRIYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSSETELNDAIA 250

Query: 741  NLDGMSLDGRAIRVNVAADEP 679
             LDG SLDGRAI VN+A + P
Sbjct: 251  ALDGQSLDGRAITVNIAQERP 271