BLASTX nr result

ID: Salvia21_contig00002516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00002516
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...    72   6e-11
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]               63   2e-08
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]               63   2e-08
ref|XP_002321582.1| rna-dependent RNA polymerase [Populus tricho...    58   9e-07
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...    57   2e-06

>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = -1

Query: 417  DKQQKLASAWYYVTYHRNYLRGSRNCLGFPWSVGDVLMDIK 295
            D+ +KLASAWY+VTYH +Y  GS NCLGFPW VGD+L+DIK
Sbjct: 1071 DEHKKLASAWYHVTYHPSYCEGSANCLGFPWVVGDILLDIK 1111


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = -1

Query: 417  DKQQKLASAWYYVTYHRNYLRGSRNCLGFPWSVGDVLMDIK 295
            D+ QKLASAWYYVTYH NY +   N L FPW VGD+L+ +K
Sbjct: 1069 DEHQKLASAWYYVTYHPNYFQERMNSLSFPWIVGDILLRVK 1109


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = -1

Query: 417  DKQQKLASAWYYVTYHRNYLRGSRNCLGFPWSVGDVLMDIK 295
            D+ QKLASAWYYVTYH NY     N L FPW VGD+L+ IK
Sbjct: 1069 DEHQKLASAWYYVTYHPNYFEERMNSLSFPWIVGDILLRIK 1109


>ref|XP_002321582.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1110

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = -1

Query: 414  KQQKLASAWYYVTYHRNYLRGSRNCLGFPWSVGDVLMDIK 295
            + Q +ASAWY+VTYH  Y     NCL FPW VGD+L++IK
Sbjct: 1064 EHQCMASAWYHVTYHPTYFHERMNCLSFPWIVGDILLNIK 1103


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/40 (55%), Positives = 31/40 (77%)
 Frame = -1

Query: 414  KQQKLASAWYYVTYHRNYLRGSRNCLGFPWSVGDVLMDIK 295
            ++Q+LASAWY+VTYH +Y +    CL FPW V D+L++IK
Sbjct: 919  EKQRLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNIK 958


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