BLASTX nr result

ID: Salvia21_contig00001853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00001853
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516245.1| chlorophyll A/B binding protein, putative [R...   427   e-117
ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, ...   420   e-115
ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Po...   417   e-114
gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]      417   e-114
emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]   417   e-114

>ref|XP_002516245.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223544731|gb|EEF46247.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 297

 Score =  427 bits (1097), Expect = e-117
 Identities = 197/246 (80%), Positives = 217/246 (88%), Gaps = 5/246 (2%)
 Frame = +2

Query: 2   REIPASSLPGKTATLR----RRGLNATKGP-SSVCQPLPPDRPLWFPGSSPPEWLDGSLP 166
           REIP  +   K  T +    +  LNATKG  S+VC+PLPPDRPLWFPGSSPPEWLDGSLP
Sbjct: 51  REIPQKAFIRKIGTCQVGKAKVKLNATKGGVSTVCEPLPPDRPLWFPGSSPPEWLDGSLP 110

Query: 167 GDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVAGILIPEWLQGLGFIENFSWYSAGE 346
           GDFGFDPLGLGSDPELLKWFAQAELMH+RWAML VAGILIPEWL+ LGFIEN++W+ AG 
Sbjct: 111 GDFGFDPLGLGSDPELLKWFAQAELMHSRWAMLAVAGILIPEWLESLGFIENYNWFDAGA 170

Query: 347 REYFADPATLLVMQLALMGWAEGRRWADMLNPGCVDMEPNLPHKTKPKADVGYPGGLWFD 526
           REYFADP TL ++QL LMGW EGRRWADM+ PGCVD+EP LP+KTKPK DVGYPGGLWFD
Sbjct: 171 REYFADPTTLFIVQLVLMGWVEGRRWADMIKPGCVDIEPTLPNKTKPKPDVGYPGGLWFD 230

Query: 527 PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAVYTHQTPIQNLMAHIADPGHCNI 706
           P+MWGRGSPEPVMVLRTKEIKNGRLAMLAF+GFCFQAVYT + PI+NLMAHIADPGHCNI
Sbjct: 231 PLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGEGPIENLMAHIADPGHCNI 290

Query: 707 FSAFTT 724
           FSAFT+
Sbjct: 291 FSAFTS 296


>ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
           vinifera] gi|297738533|emb|CBI27778.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score =  420 bits (1080), Expect = e-115
 Identities = 193/243 (79%), Positives = 213/243 (87%), Gaps = 2/243 (0%)
 Frame = +2

Query: 2   REIPASSLPGKTATLR--RRGLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDGSLPGDF 175
           RE+ +   P K  T    R  LNATKG SSVC+PLPPDRPLWFPGSSPPEWLDGSLPGDF
Sbjct: 16  REVSSKHFPRKLTTWLPGRVRLNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF 75

Query: 176 GFDPLGLGSDPELLKWFAQAELMHARWAMLGVAGILIPEWLQGLGFIENFSWYSAGEREY 355
           GFDPLGLGSDPELL+WFAQAELMH+RWAML VAGILIPE L+ LGFIENFSWY AG +E+
Sbjct: 76  GFDPLGLGSDPELLRWFAQAELMHSRWAMLAVAGILIPECLERLGFIENFSWYDAGAQEF 135

Query: 356 FADPATLLVMQLALMGWAEGRRWADMLNPGCVDMEPNLPHKTKPKADVGYPGGLWFDPMM 535
           FADP TL V+QLALMGW EGRRWAD++NPGCVD++   P+K KPK DVGYPGGLWFDP M
Sbjct: 136 FADPTTLFVVQLALMGWVEGRRWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFM 195

Query: 536 WGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAVYTHQTPIQNLMAHIADPGHCNIFSA 715
           WGRGSPEPVMVLRTKEIKNGRLAMLAF+GFCFQA+YT + PI+NLMAHIADPGHCN+FSA
Sbjct: 196 WGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSA 255

Query: 716 FTT 724
           FT+
Sbjct: 256 FTS 258


>ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
           gi|222833488|gb|EEE71965.1| light-harvesting complex I
           protein Lhca6 [Populus trichocarpa]
          Length = 261

 Score =  417 bits (1073), Expect = e-114
 Identities = 191/244 (78%), Positives = 210/244 (86%), Gaps = 2/244 (0%)
 Frame = +2

Query: 2   REIPASSLPGKTATLR--RRGLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDGSLPGDF 175
           R+ P  SL GK    +  +  +NATKG SSVC+PLPPDRPLWFPGSSPPEWLDGSLPGDF
Sbjct: 18  RDKPQKSLLGKIEKCQAVKVRVNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF 77

Query: 176 GFDPLGLGSDPELLKWFAQAELMHARWAMLGVAGILIPEWLQGLGFIENFSWYSAGEREY 355
           GFDPLGLGSDPE LKWFAQAEL+H RWAML  AGILIPEWL+ LGFI+NF+W+ AG REY
Sbjct: 78  GFDPLGLGSDPESLKWFAQAELIHGRWAMLAAAGILIPEWLERLGFIDNFNWFDAGTREY 137

Query: 356 FADPATLLVMQLALMGWAEGRRWADMLNPGCVDMEPNLPHKTKPKADVGYPGGLWFDPMM 535
           FADP TL V+QL LMGW EGRRWADM+ PGCVD++P LPHKTKPK DVGYPGGLWFDP  
Sbjct: 138 FADPTTLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDVGYPGGLWFDPWN 197

Query: 536 WGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAVYTHQTPIQNLMAHIADPGHCNIFSA 715
           WGRGSPEPVM +RTKEIKNGRLAMLAF+GF FQA+YT + PI NLMAHIADPGHCNIFSA
Sbjct: 198 WGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIFSA 257

Query: 716 FTTH 727
           FT+H
Sbjct: 258 FTSH 261


>gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 261

 Score =  417 bits (1072), Expect = e-114
 Identities = 190/244 (77%), Positives = 210/244 (86%), Gaps = 2/244 (0%)
 Frame = +2

Query: 2   REIPASSLPGKTATLR--RRGLNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDGSLPGDF 175
           R+ P  SL GK    +  +  +NATKG SSVC+PLPPDRPLWFPGSSPPEWLDGSLPGDF
Sbjct: 18  RDKPQKSLLGKIEKCQAVKVRVNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF 77

Query: 176 GFDPLGLGSDPELLKWFAQAELMHARWAMLGVAGILIPEWLQGLGFIENFSWYSAGEREY 355
           GFDPLGLGSDPE LKWFAQAEL+H RWAML  AGILIPEWL+ LGFI+NF+W+ AG REY
Sbjct: 78  GFDPLGLGSDPESLKWFAQAELIHGRWAMLAAAGILIPEWLERLGFIDNFNWFDAGTREY 137

Query: 356 FADPATLLVMQLALMGWAEGRRWADMLNPGCVDMEPNLPHKTKPKADVGYPGGLWFDPMM 535
           FADP TL V+QL LMGW EGRRWADM+ PGCVD++P LPHKTKPK D+GYPGGLWFDP  
Sbjct: 138 FADPTTLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDIGYPGGLWFDPWN 197

Query: 536 WGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAVYTHQTPIQNLMAHIADPGHCNIFSA 715
           WGRGSPEPVM +RTKEIKNGRLAMLAF+GF FQA+YT + PI NLMAHIADPGHCNIFSA
Sbjct: 198 WGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIFSA 257

Query: 716 FTTH 727
           FT+H
Sbjct: 258 FTSH 261


>emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]
          Length = 229

 Score =  417 bits (1071), Expect = e-114
 Identities = 187/222 (84%), Positives = 205/222 (92%)
 Frame = +2

Query: 59  LNATKGPSSVCQPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE 238
           LNATKG SSVC+PLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL+WFAQAE
Sbjct: 7   LNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAE 66

Query: 239 LMHARWAMLGVAGILIPEWLQGLGFIENFSWYSAGEREYFADPATLLVMQLALMGWAEGR 418
           LMH+RWAML VAGILIPE L+ LGFIENFSWY AG +E+FADP TL V+QLALMGW EGR
Sbjct: 67  LMHSRWAMLAVAGILIPECLERLGFIENFSWYDAGAQEFFADPTTLFVVQLALMGWVEGR 126

Query: 419 RWADMLNPGCVDMEPNLPHKTKPKADVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGR 598
           RWAD++NPGCVD++   P+K KPK DVGYPGGLWFDP MWGRGSPEPVMVLRTKEIKNGR
Sbjct: 127 RWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGR 186

Query: 599 LAMLAFLGFCFQAVYTHQTPIQNLMAHIADPGHCNIFSAFTT 724
           LAMLAF+GFCFQA+YT + PI+NLMAHIADPGHCN+FSAFT+
Sbjct: 187 LAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSAFTS 228


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