BLASTX nr result

ID: Salvia21_contig00001482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00001482
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    91   8e-16
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    81   2e-14
ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago...    63   3e-13
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    75   6e-11
ref|XP_003616058.1| hypothetical protein MTR_5g075660 [Medicago ...    54   1e-08

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 90.9 bits (224), Expect = 8e-16
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 3/231 (1%)
 Frame = -1

Query: 1107 GVVTILWGLWYSRNQLIFQNVVASPHAMMKLLKISFLEAASNFKLGSMANSVFELGILRR 928
            G +T    + + RN   FQ+ + S  +    +  S +  + N   G   +S  +  IL  
Sbjct: 941  GQLTSKHAVSFLRNAFRFQSQLQSIQSAKARIH-SLIAMSGNVSTGKCLHS--DSAILEE 997

Query: 927  LAVAGNPRPAPVTIVVGWTLPSPSWLKANIDGSIRGNPPVMHAGGVVRNAFNSVVXXXXX 748
             +V+   R     I+V W  PSP  LK N DGS+ G   +   GG+ R++  S +     
Sbjct: 998  FSVSPRHRKYKDIILVLWKNPSPPLLKVNTDGSVVGG--LAACGGLFRDSSGSFLGAFSC 1055

Query: 747  XXXXXXXXXXXXXXFIIILERAAAHQWYNLWIESDSTYVVNVFNNREVPVPWHFRSRWRA 568
                          FI+ LE AA H W NLW+ESDST  + +F+N  + V W  R+RW  
Sbjct: 1056 NIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTSALMIFSNSSL-VQWLLRNRWHN 1114

Query: 567  ALK-GVEHYNLRCSHNYREGNHVADYLAS-SHSQEG-FWLHSIPEIAQLVF 424
            A + G++   +  SH   EGN  AD LA+  H  +G  WL ++P    L F
Sbjct: 1115 AQRLGIQ---VISSHILHEGNRCADNLANMGHGIQGSIWLETLPTELHLDF 1162


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
            gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
            protein ccsA [Medicago truncatula]
          Length = 666

 Score = 80.9 bits (198), Expect(2) = 2e-14
 Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 6/260 (2%)
 Frame = -1

Query: 1233 HLWGFLFSWFEMEVPFFHDIGSII-IFAMNYNASAQ-VTSLWRVGVVTILWGLWYSRNQL 1060
            H+   L+ W         D  S + +   N+ + ++ V ++    ++  +W +W  RNQ 
Sbjct: 96   HVTSRLWDWLGKGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIERNQR 155

Query: 1059 IFQNVVASPHAMMKLLKISFLEAASNFKL----GSMANSVFELGILRRLAVAGNPRPAPV 892
             F N      AM  L  I   E   +F L    G+ A   +++  L  +          +
Sbjct: 156  CFHN---KHQAMTTLFNIILAEVKMSFSLCMIKGNSAMQDYKVAKLFNIPFKVKRVTPHL 212

Query: 891  TIVVGWTLPSPSWLKANIDGSIRGNPPVMHAGGVVRNAFNSVVXXXXXXXXXXXXXXXXX 712
             I+  W  P    +K N DGS  G  P    G V+R++ +  +                 
Sbjct: 213  DII--WKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEF 270

Query: 711  XXFIIILERAAAHQWYNLWIESDSTYVVNVFNNREVPVPWHFRSRWRAALKGVEHYNLRC 532
               ++ +E+A   Q  ++ +E+DS  VVN FN + + VPW  R+RW+      +  +  C
Sbjct: 271  CAGMMAMEKAQEMQLMHVCLETDSLKVVNAFN-KGLGVPWQMRARWQNCWDFCDSISCSC 329

Query: 531  SHNYREGNHVADYLASSHSQ 472
             H  REGN VAD LA  H Q
Sbjct: 330  VHILREGNMVADALA-KHGQ 348



 Score = 25.8 bits (55), Expect(2) = 2e-14
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = -2

Query: 1334 IQRCGFIGPNICSLCLNAEENIDHLFWGCN 1245
            +++ G +  +IC  C+ + E+  H+F+ C+
Sbjct: 67   LRKRGCLIVSICCFCMKSAESSQHIFFECH 96


>ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
            gi|355506897|gb|AES88039.1| Glycerol-3-phosphate
            dehydrogenase [Medicago truncatula]
          Length = 866

 Score = 62.8 bits (151), Expect(2) = 3e-13
 Identities = 61/252 (24%), Positives = 100/252 (39%), Gaps = 2/252 (0%)
 Frame = -1

Query: 1233 HLWGFLFSWFEMEVPFF--HDIGSIIIFAMNYNASAQVTSLWRVGVVTILWGLWYSRNQL 1060
            HLW +L S     + F    +I S+     +   +  +TS     V+ IL  +W +RN  
Sbjct: 107  HLWCWLASILNQSLHFLALEEIWSLSARGWSPQFTLAITST----VINILSAIWNARNTY 162

Query: 1059 IFQNVVASPHAMMKLLKISFLEAASNFKLGSMANSVFELGILRRLAVAGNPRPAPVTIVV 880
             F+N      +++  + ++   +ASN KL S ++ + E  IL+   V+ +P    +   V
Sbjct: 163  RFKNRKIHWESVISQIIVNVSLSASNSKL-SASSGIREFSILKAFNVSIHPLKLLIVKEV 221

Query: 879  GWTLPSPSWLKANIDGSIRGNPPVMHAGGVVRNAFNSVVXXXXXXXXXXXXXXXXXXXFI 700
              + P   W+K N DG+          G + RN+    +                     
Sbjct: 222  ISSPPISGWIKGNCDGAFAAGKAA--CGAIFRNSKGQFMGCFAE---------------- 263

Query: 699  IILERAAAHQWYNLWIESDSTYVVNVFNNREVPVPWHFRSRWRAALKGVEHYNLRCSHNY 520
                         L  E+D   VV  F ++++  PW   +RW   L      N   SH +
Sbjct: 264  ------------GLNNETDFMLVVQAFKSQDI-FPWQLTNRWSNCLNITSSMNFIVSHIF 310

Query: 519  REGNHVADYLAS 484
            REGN  AD LA+
Sbjct: 311  REGNACADALAN 322



 Score = 39.7 bits (91), Expect(2) = 3e-13
 Identities = 15/37 (40%), Positives = 27/37 (72%)
 Frame = -2

Query: 1337 QIQRCGFIGPNICSLCLNAEENIDHLFWGCNFAISIY 1227
            +++  G + P ICSLC+ AEE+  HLF+ C++A+ ++
Sbjct: 73   KLKERGHVIPFICSLCMTAEESSFHLFFECSYAVHLW 109


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 57/241 (23%), Positives = 90/241 (37%)
 Frame = -1

Query: 1158 FAMNYNASAQVTSLWRVGVVTILWGLWYSRNQLIFQNVVASPHAMMKLLKISFLEAASNF 979
            F+   N S  V  +    +V I+W +W   N   F  V      +   +    L  +   
Sbjct: 151  FSSILNISRMVQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFML 210

Query: 978  KLGSMANSVFELGILRRLAVAGNPRPAPVTIVVGWTLPSPSWLKANIDGSIRGNPPVMHA 799
             +   A+S+ +  + R  ++            + W  P    +K N DGS+ G+P     
Sbjct: 211  DIVKGASSMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSI 270

Query: 798  GGVVRNAFNSVVXXXXXXXXXXXXXXXXXXXFIIILERAAAHQWYNLWIESDSTYVVNVF 619
            G + R +                         +  +E+A      N+WIE+DS  V+  F
Sbjct: 271  GVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVIRAF 330

Query: 618  NNREVPVPWHFRSRWRAALKGVEHYNLRCSHNYREGNHVADYLASSHSQEGFWLHSIPEI 439
            +     VPW    RW   L         C+H  REGN VAD LA   + +G  L+S   +
Sbjct: 331  HFN-TGVPWKMHIRWHNCLLFCRSIRSLCTHVNREGNLVADALAK--NGQGLALYSSHPL 387

Query: 438  A 436
            A
Sbjct: 388  A 388


>ref|XP_003616058.1| hypothetical protein MTR_5g075660 [Medicago truncatula]
            gi|355517393|gb|AES99016.1| hypothetical protein
            MTR_5g075660 [Medicago truncatula]
          Length = 219

 Score = 53.9 bits (128), Expect(2) = 1e-08
 Identities = 33/104 (31%), Positives = 53/104 (50%)
 Frame = -1

Query: 1137 SAQVTSLWRVGVVTILWGLWYSRNQLIFQNVVASPHAMMKLLKISFLEAASNFKLGSMAN 958
            S+QV+ ++   ++  L  +W++RN L F  V  + H+  K+   SF+  + N   G    
Sbjct: 68   SSQVSDIFLAAILHTLHTIWWARNSLRFTTVTPTLHST-KVRIHSFIAMSGNISKGKCLP 126

Query: 957  SVFELGILRRLAVAGNPRPAPVTIVVGWTLPSPSWLKANIDGSI 826
            S  +L      AV+ + R     I+V W  P+ SWLK N DGS+
Sbjct: 127  S--DLAFFDSFAVSPHCRRVKDIIMVLWKAPTTSWLKVNTDGSV 168



 Score = 33.1 bits (74), Expect(2) = 1e-08
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 1322 GFIGPNICSLCLNAEENIDHLFWGCNFAISIY 1227
            G I  +IC+LCL  +E+ +HLF  C F+  ++
Sbjct: 9    GCIVVSICNLCLKTDESSEHLFLRCQFSKQLW 40


Top