BLASTX nr result

ID: Salvia21_contig00001231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00001231
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF80474.1| PSI reaction center subunit III [Citrus sinensis]     141   9e-32
ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Popu...   140   2e-31
dbj|BAF80472.1| PS1 reaction center subunit III [Citrus sinensis...   139   3e-31
ref|XP_002521161.1| photosystem I reaction center subunit IV A, ...   139   3e-31
emb|CAD29821.2| putative photosystem I reaction centre subunit I...   137   1e-30

>dbj|BAF80474.1| PSI reaction center subunit III [Citrus sinensis]
          Length = 143

 Score =  141 bits (355), Expect = 9e-32
 Identities = 78/142 (54%), Positives = 94/142 (66%), Gaps = 5/142 (3%)
 Frame = -1

Query: 572 MASCSMASC--GFVVTPNVISSAATTPKATVLFFPSKKTGGS--RLVVHAG-DXXXXXXX 408
           MASC+MAS   GF +TPNV ++  +  K+ +LFFP K    +  RLVV A  D       
Sbjct: 1   MASCNMASAASGFSLTPNVATNVNSGSKSNMLFFPPKNNSSNSFRLVVRASEDAAAPPAA 60

Query: 407 XXXXXXXXXXXXXXXXXXPIGPPRGSKVRVLRKESYWFKGVGSVVAVDQDPKSRYPVVVR 228
                             PIGP RG+KV++LR+ESYW+ G+GSVVAVDQDPKSRYPVVVR
Sbjct: 61  ATTAAPAEGEAAPKPKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVR 120

Query: 227 FNKVNYANVSTNNYALDEVEVI 162
           FNKVNYANVSTNNYALDE+E +
Sbjct: 121 FNKVNYANVSTNNYALDEIEEV 142


>ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Populus trichocarpa]
           gi|222843558|gb|EEE81105.1| hypothetical protein
           POPTRDRAFT_711610 [Populus trichocarpa]
          Length = 140

 Score =  140 bits (352), Expect = 2e-31
 Identities = 78/141 (55%), Positives = 92/141 (65%), Gaps = 4/141 (2%)
 Frame = -1

Query: 572 MASCSMASC--GFVVTPNVISSAATTPKATVLFFPSKKTGG--SRLVVHAGDXXXXXXXX 405
           MASC+MAS   GF + P V ++  +T K T+LFF SK      SRLVV + +        
Sbjct: 1   MASCNMASAASGFALAPTVATNTNSTSKPTMLFFSSKNNNKNYSRLVVRSAEEGASPPAA 60

Query: 404 XXXXXXXXXXXXXXXXXPIGPPRGSKVRVLRKESYWFKGVGSVVAVDQDPKSRYPVVVRF 225
                             IGP RG+KV++LRKESYWF GVGSVVAVDQDP+SRYPVVVRF
Sbjct: 61  TTEPAVAEAPKPKPPP--IGPKRGTKVKILRKESYWFNGVGSVVAVDQDPRSRYPVVVRF 118

Query: 224 NKVNYANVSTNNYALDEVEVI 162
           NKVNYANVSTNNYALDE+E +
Sbjct: 119 NKVNYANVSTNNYALDEIEEV 139


>dbj|BAF80472.1| PS1 reaction center subunit III [Citrus sinensis]
           gi|157678956|dbj|BAF80476.1| PSI reaction center subunit
           III [Citrus sinensis] gi|157678960|dbj|BAF80478.1| PSI
           reaction center subunit III [Citrus sinensis]
          Length = 143

 Score =  139 bits (351), Expect = 3e-31
 Identities = 77/142 (54%), Positives = 94/142 (66%), Gaps = 5/142 (3%)
 Frame = -1

Query: 572 MASCSMASC--GFVVTPNVISSAATTPKATVLFFPSKKTGGS--RLVVHAGDXXXXXXXX 405
           MASC+MAS   GF +TPNV ++  +  K+ +LFFP K    +  RLVV A +        
Sbjct: 1   MASCNMASAASGFSLTPNVATNVNSGSKSNMLFFPPKNNSSNSFRLVVRASEEAAAPPAA 60

Query: 404 XXXXXXXXXXXXXXXXXP-IGPPRGSKVRVLRKESYWFKGVGSVVAVDQDPKSRYPVVVR 228
                            P IGP RG+KV++LR+ESYW+ G+GSVVAVDQDPKSRYPVVVR
Sbjct: 61  ATTAAPAEGEAAPKPKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVR 120

Query: 227 FNKVNYANVSTNNYALDEVEVI 162
           FNKVNYANVSTNNYALDE+E +
Sbjct: 121 FNKVNYANVSTNNYALDEIEEV 142


>ref|XP_002521161.1| photosystem I reaction center subunit IV A, chloroplast precursor
           [Ricinus communis] gi|223539730|gb|EEF41312.1|
           photosystem I reaction center subunit IV A, chloroplast
           precursor [Ricinus communis]
          Length = 141

 Score =  139 bits (350), Expect = 3e-31
 Identities = 74/141 (52%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
 Frame = -1

Query: 572 MASCSMASC--GFVVTPNVISSAATTPKATVLFFPSKKTG--GSRLVVHAGDXXXXXXXX 405
           MASCSMAS   GF++TPNV ++  ++ ++ +++FPSK      SRLVV A +        
Sbjct: 1   MASCSMASAASGFLLTPNVPANTNSSSRSNMVYFPSKNNNINNSRLVVRAAEEAAAPAPA 60

Query: 404 XXXXXXXXXXXXXXXXXPIGPPRGSKVRVLRKESYWFKGVGSVVAVDQDPKSRYPVVVRF 225
                             IGP RG+KV++LR+ESYW+ G+GSVVAVDQDPK+RYPVVVRF
Sbjct: 61  TTTAPAEGEAPKPKPPP-IGPKRGTKVKILRRESYWYNGIGSVVAVDQDPKTRYPVVVRF 119

Query: 224 NKVNYANVSTNNYALDEVEVI 162
           +KVNYANVSTNNYALDE+E +
Sbjct: 120 DKVNYANVSTNNYALDEIEEV 140


>emb|CAD29821.2| putative photosystem I reaction centre subunit IV [Populus x
           canadensis]
          Length = 140

 Score =  137 bits (346), Expect = 1e-30
 Identities = 77/141 (54%), Positives = 91/141 (64%), Gaps = 4/141 (2%)
 Frame = -1

Query: 572 MASCSMASC--GFVVTPNVISSAATTPKATVLFFPSKKTGG--SRLVVHAGDXXXXXXXX 405
           MASC+MAS   GF +TP V ++  +T K T+LFF SK      SRLVV + +        
Sbjct: 1   MASCNMASAASGFALTPAVATNTNSTSKPTMLFFSSKNNNKNYSRLVVRSAEEGASPPAA 60

Query: 404 XXXXXXXXXXXXXXXXXPIGPPRGSKVRVLRKESYWFKGVGSVVAVDQDPKSRYPVVVRF 225
                             IGP RG+KV++LRKESYWF G GSV AVDQDP+SRYPVVVRF
Sbjct: 61  TTEPAVAEAPKPKPPP--IGPKRGTKVKILRKESYWFNGFGSVAAVDQDPRSRYPVVVRF 118

Query: 224 NKVNYANVSTNNYALDEVEVI 162
           NKVNYANVSTNNYALDE+E +
Sbjct: 119 NKVNYANVSTNNYALDEIEEV 139


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